>Osa08LNT0397600.1

TTGCTGTGATGTTGTGTCTTCCTCATCTGAAACCAACATGGATGTTAACATCAGGAAATGCAAAGAAGACGAACTGATTGCGATGCATTCTTAGTCACATCTTCAATCGAACTGGATGCAATGCTCTTCCTCTGTATAATTCCATTGTACTAGCTTCCTAGTACAGAAAGTGACAAGACAAGTTAAGCAGACTAGCATTGTAATAGATTCTCCATGAAGTCTCACATTCTGCCGTTTACTTTGGTCAACTGGAATCTCCTTTACAAAGGAGTGGAGGCACCATAATCTGTTTGTGCTATACAATGACCTTTTTAGCTTGAAGAAAAATGCATAGTGGACTTGAGTGCGGCCCTCCTTTTGGTGATCAAGACGACTTCTGGTGACAGTAGTACTACTGAAACTAGAACAGCATGGATACATAGATAGATACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCAGATTTATATTGATGCTAATGAATCTAGACATATATATTTATCTAGATTCATTAGCATCAATATGAATGTGGAAAATGCTAAAATGACTTATATTATGAAACGGAGGAAGTAGTTGAGATGTTGAACAACACACTTCATTATTATTATTTTTTAACTTTACCTAGCAAATGCTCATATTTATATATGATATTTTACCTTG

Explanation	CPC Score
noncoding (weak)	-0.568105

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0397600.1	8	2111220	G	A
Osa08LNT0397600.1	8	2111579	A	C
Osa08LNT0397600.1	8	2111754	C	T
Osa08LNT0397600.1	8	2111826	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0397600.1	osa-miR5837.1	Cleavage	3.5	21.417	1	21
Osa08LNT0397600.1	osa-miR166i-5p	Cleavage	5.0	18.424	1	21
Osa08LNT0397600.1	osa-miR413	Translation	3.5	19.453	1	21
Osa08LNT0397600.1	osa-miR1439	Cleavage	3.5	9.417	1	21
Osa08LNT0397600.1	osa-miR1436	Cleavage	3.0	10.36	1	21
Osa08LNT0397600.1	osa-miR1320-5p	Cleavage	3.5	11.672	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0397600.1	8	nan	Resistance or Tolerance	Other soil stress tolerance	C390	C1121
Osa08LNT0397600.1	8	nan	Resistance or Tolerance	Drought tolerance	RM407	RM38
Osa08LNT0397600.1	8	qDTH8	Physiological trait	Flowering	R1943	R2976
Osa08LNT0397600.1	8	qPL8	Morphological trait	Panicle/flower	R1943	R2976
Osa08LNT0397600.1	8	cl8.1	Morphological trait	Dwarf	RG20	RG885

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus