>Osa08LNT0398300.3

GTCAAATTTTGTGTCATATATAGAGCTATTGCTAGTAGCTTGTCAACATATAGGTTTAGAAGACTGCCATTTCATTAAACAAGGATTGCACATTCTTCGATAATGTCACATATCCTCCATGGTCAGTCATATTACTAGGTGACAATGCAGCACCTTTTTAAGTCACCCTCAATCAACCCACTTAGAAGCATCAGAGAATTGTACAGGGAAAGTAATGTTTTCCCTAAATGAGTCAACAAGATTATGAACTTCAACCTTGAGATCTACTGTCAAACTTTTCCCCTGCAGGTATCCCCAGCCAAGAGAAAGAAGGTAGTCTTCTAACTGAGGTAAAGTAGAACAACAACTATCCTGAAAAACAATCACATCCCCTCGTCTAATACCAAGCCTCTCCGCAATAGAATCAACTTTCACCTATGAAACCAAAAGAGTCAAATACTACGAGAAAAATATCTGGACAGAATAATGTTATACCAGATTCACAATGAAACCGCTGGTGATATTGTTGTCAAGACAGAGTTCCTCCAGTTTAGAGACATCCAGTAGTTCCACCGCCTTCAATTGCATGCCAAGTATGGGGCGAGCAACACGGCTAAACTGATGCCACATCTCAACGCAAGTTCTGATTGTAGTGATAGAGGTTACTACCGGACCCGGGTTATTGTCAAATACAATCCCAATGATATTACCATCATGGTCAATCACTGGCCCTCCTGAACCACCCTCAGGAATATCACAACTCAGAAACATATAGTGGTTGTTCAATAACATGGGACATTCCAGCCATGAGATTTTTCCATGCCTAACCATTAAGCACATGTTTTCATCCCTAGCCAATGCAAATACGTCCTGACCATAGGTTGTACTCGAGCCAAAAGAAGGGACCTGCAACTGGAAGTCTCCCATGACCTCTAAAAGAGCAACATCATAGTGAACATTGAAGGACAACAACCGTCCTTCTGTGATAGTGTTATCTGGCAGATGAACAGATAGCAGGCCAGCCCACAAAAGCCCAATAACCTTCATGCCAGCCAAAGGTCAAAGAAACAACCCTAACACCCACACCAGGTGCGTCTCTCCTGTCACAGCGCCACCTCCGATGTCGCTTCTTCCTCAAGCCTGCACATCGCTTCTTCCTCGCGCCAACTCTTCTTCCCATGCTAGCTCTGCTCCTCTATCTGTGCTCCTTTCTCCCCAGATTCAGAATGAATCCAGCAGTGCATCTATCTGTATGTACTCCTCTTGGGTAGATCTGGCGCTGCTCCCTAGAGTCAAAATGAATCTTCACCCCTCTCTTTCTCTTTATCTGGGTTATGGCGCTAAGCCGTTAAGGCTCAGGGATGCCTTGACCCCTCGGCACGCCCTAGCGCCAAAGCAACGCCTTGAGTGTTGGGTCATGTAATTCACCCTTGAAGTCACAGACGACAGAAGAAGAGGTCAGGATCTTGGCGCACTTGTTAGCCCCATCCCAACCAAAGACGATGCCAGTGCACTGGAAAATCAATCCCCCATCAGGCGTTATGGATGAAACACTGACAACGGAGCGAGCCACGCGTAGCACCATGGCCTTGTCTTGCGAACTGACCACGGCATCAGCGGTGAGGGGATCCCTAGGCTCATCCCTGAGAGTGGGGATATCTCGTTGGTCGAGTTTGGTGCATTGCCCCGGCGGTAAGCTGGGACAAGGCGGGTTTCTTCTTTTCCTGCCCGCCGCCGTTGTCTTCCTCGGAACCGGACCTGCCGACGTCGACGCCGATACGCCCTTTCTCTTCTTCGGAGCCGCTCCTGCCGGCGCTTTGCGGTCAGTCCTGCCCCCGCCGCCAGCAGAATCCGACACTCTAGGGTGGTCGGTAGTATCGAACCCTAGATCCCTCGCTCGAGCTCGTGTCCACCTTCCGCTAGCAGCCGGACTCGTTTCCGATGATTTAGAGCCAGTATGGCCTTCTTCTCCATTCGTGGCGGGGGATCGTGCCGCCGCCCCCGTCGACCTCTTCCGCAGTTTGGGTGGCATCGCCGCCGCTCGAGTGGCGGCGGAGCAGCGGAGGTGTCGCCTCGGGTTCCACAGGTCCTCAGGCGGGCCGCGCGAGCGGCGCAGGGTACCGGACTAT

Explanation	CPC Score
noncoding (weak)	-0.99971

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0398300.3	8	2580550	C	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa08LNT0398300.3	DTM_#DNAt_MULE_japo_Os0085	Chr8	-	2576262	2576599	12

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0398300.3	osa-miR5819	Cleavage	4.5	24.525	1	21
Osa08LNT0398300.3	osa-miR816	Translation	4.5	23.332	1	20

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0398300.3	8	nan	Resistance or Tolerance	Other soil stress tolerance	C390	C1121
Osa08LNT0398300.3	8	qDTH8	Physiological trait	Flowering	R1943	R2976
Osa08LNT0398300.3	8	qPL8	Morphological trait	Panicle/flower	R1943	R2976
Osa08LNT0398300.3	8	cl8.1	Morphological trait	Dwarf	RG20	RG885

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus