© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0398900.1
AGCGCCAACTGAAATGGCTGGCATTCATTTTCTGTTGCATTAAGACATTGACAACTGATCAGTTTTTCAGTACTAACAGATAGGAGTAATAGATAGTGAGGAACAATCATCAAGCTAGTGGTCTAATCAAGCTAACCAGGCATTCAAGCCCAGGACAAATCTTAAGTAGCATGAAGCTATCTGGTCTACCAGAAATGTACATACAAAATTTGTGGAAGATTTCCTCACTAAAATGCTGAGACATATATGGTACACTCACAATGATATGATCATGCAAATCTTTGTACAAAGCTCAAAATTTACACATAAGGTGCAGAACATGGCCACACCTGGAAAAAACAGGTAAAGCTATTTTACAATATAAATAAGATACGCAGATGCAGTTTTGAATCCCCCCCCCCCTTCCCATTAGAAGCTGCCAGGAGCTTGTTCATGAACATAATGTCCAACGTCTGGTATCATCGAAATTCAGAAGCTTCATTGAGTTCATGGAATACTTGCAATAGGGCATGTTGCCTCTCTTTATGAAGGAGATTGAAAATGAATAGATGATGAGTTGGCTTTTCCGGGAGGAAGACGGCCACTGTCATGCTGCTTGTTAATGGGGATCGAGACCACCATCTATGTTTGTCATTCACACTATAATTCTAGGCTTCTTGCCAATTGCTCAAATCTCTGAGCAACAGTGTGCTGATTTTCACTTGTATATATGTCGAGCAAGGACTTCACAGCAGAAGACAACATAGCTTTTTGTGCCACGTTTGGGCTGAAACCATCCTCGTCATTTATGGCCTCATTTGCCAAAGGCTGGTCCTCAACATTATTGAACAATGAGAACAATGACTTCAGCCAGTCTTCTAGAAAGGATGCTTTCTTGATAAGAAAATCTCTCAGGCTTTGATCATCTTTTGGTGAAACAAAACTAAACAAATGAAGAGCAGTAAATGTAACCTGTTTCTCAAGGTTGCCTTTATGTTTGAAATTTGAAGGTGATGATAAACTGTTGGAACTCAATGACTCAAGAACATGCTCGATTCCTCGAACAACATCTGGAAATGAGCTACCATAATCAAGCCGTGAGACTGGAACTGCTAAGGCAACAGCTGCATGCATCCTTATCTTGTAATTGTTTGAGTCACGGAGTAGTAGCAGAAGTATGCTATAAACACTTGATGCCCAAGGCATATCTGGAAGTCTCAAGGTGTCGTTCATGAATAAGTTGCTAAGAGCATGGCAAACATTCCATTGAACCTTTACATTTCCTGTTGTCACACAGGACATCAAAGCATGTACCATCCTTTCAAGCCAGACAGGATCTCCACAGAGAACGGAATTACTTGGGTCATCAACTGTGTCAGAATGATTATTGAATCTGATAAATCTTAAAAGGTATCCAAGAGCCCTAACAGCGTTTGACTTTACCTTTTCACCATCTTTAGCAAGGCGCAAAGCAATTTCAACCAGCAATGATATGGCTGATTTATCTAGTACACCTGCAGAGGGATTGGTATCTAATGCTCTAAAACGAATAGAAGAGCAAAGATTTGCCAAGGCCCATGATGCAGTGATACGAACTGGAGTTGATGAATTCCGTGTGTTAAACTCAATGGCATCTATGAACTTGCCAGGTAGGCTAGGACTTGACAGTATGCTGGGGAAACATGCAACAATACCAATGGCTCTACATGCAGCAGACCTTACAGCAGGAGCTGTATCACTCAATGCAGCATGAATCGATGAGGACGTCACATAATCCCTCTTGTTTTCTGGCAGGGAGAAGAAAACATCATAAGTCATGCCCGCGAAACATGTCAGTGATGCTGTCCTGACCGTAGCAGAGCCATGTGATAATCCTTGAGGGAGAAGCCTTTCTATCACCTCAATCCAACGATTAGTTCCGAGAGTTATGTCCAAAGTAAAATTTTGTGATGGTCCAGGAACATCAGTCTCAAAGTGAGGCGCAGATTTGATAGTTTTGTTTATGGTACAATCAGAAATTTGCTGAATATCTTGCAATCTATATTCTTTGAGGTCATCTGTTCCCTTGAATCCAGATGAAACACGCAGACACTCATCTATTACCTTAATGGCAGCCACAAGACATCTTCCTTTAATTGATGATTCTTCTTTAGGAAGCCCAAAATTAGCATCTCTTTGGTCTTCCAAGCTTTGCATTTGCAATAAATCAAGAACAATGTATTGAACTTTTGCCCAAATGATATTTGCACAGCTTGGATAATTATGAACTGCTGATCTCAACACCTGGAGAGCTCCAAATCTCACACTGACATGTATTTCCTGTTCTATATAATGTAGAAGAATAGATATCACACTTGACTCTTGCTGAGCATGTGATGGCCCTGCACATCCATCTTGAGTGAGAACTTCAAAAACATTTGAAGAAGGTGGTTCTTTTGAAAATGCTGCTTCCAAGCAATTCAGGACATTAACCAGCAAAGCATAGTGCTCATTCTTATTTGAGTGTCTGTCCAACAATCTCCTGCGCATATCTGTGATTACAGTTGGCAACAAGGTGTAACAGATATCAAAAGGATGAGAACTTTGAACAATGCTGAAAGCAAAGTAGTTTGAGTTTCACGCTGTATCAAATACAACATTCCTGTATGCAGCTGCATAAGAATTTGACCAAGTGAAGAAGATAGCGTAGTGAAAGATCCCCGTCTTGATGACTCCTTGTACTCGGCAACTTGTGTCAAAACTAATGCTTGTCCTTCCAGCATGGAAGCAATGGTTGATGCTGCCTCAATACGCACCTTTATTATAGGATCGAAAATCAAGCATGTCATCAGAGTAGCTTGATATTTTCTTTGTTGGAGAACATCACTCTCGGGCAAAAGTAATGGCCATAGTGAAGTAAGTAATTTTGGGTCAGCACGACAAATATCCTGTATGCAAAGGATGGCAGCTAATCTAGCCTTTGAACTTCGGAAACGATCTCCAGTTTTTGCATATCCATCGCTATCACTCATATCTGAATCTGATGAGCTTAAATCATATCGAGAGGATTCACTATCAGAATTTCGACCATCGAACGAATCATTTCCCTTTCCACCCCTTTTACGTAAATGAGGGGGTTTATATCGTCCGGCATTGGATTTTGTATCCATTTTATATTCCATTGGAGTTATCACAGGTGGTGAAGATGACCTTAGCCCGTACATGAAAAATATTTGCAAGTTCGCAACGAAACCTGGTACATGTGCTGAAAGTGGGCCTTTGGGGTCTGAAAGAACAGAATGCAGACAACGAAGAAATGAGGTATAAAATCTTGACATAGTGCTACTCTCTATGATAAAGTTCCTTGCTGTCAAAAAATCCATCACCTTCCTCAAAACCTCAACAATGGACTGCCACAAATCTTCTGATAAACTTGAGGCTATCTTAGATAGTGCATCTTCAATCATGGAAAATGCAGAGATTTCCATATCCCAGATATTTGGATTCTTATTATTTATTGGTCCAAATGTGTGGGAAGAAAAACCAGCACCATTAGGTTTATCTGTGAGGTTCAGCTCAGATTGCAAGCATGATACAATTGAGATGAGCACTCGAAGCAAATGTGCATTCTCAGGTAAAGAAGTACTTCCGCCAAAATCTTTGCTCAAAAACCTGAGGATCTGTAAACATTCAGATACAGTGTCCAATGCGGTTTTCCTAACAGAGAGGCCCTTACCACATGAACCCTCCAATGAACATTGCATAAGAACATCAAGAAACTTCAGCATTGCCAGTAAACAAGACGAGTCGATCTCCATATTTGTTTTGTACATGATATCATGAATCAGATGGCAAACGCCACGCAGCACATCATCGGCGCCGTCGCAGGGGGACACCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0398900.1 | 8 | 3038564 | T | A |
| Osa08LNT0398900.1 | 8 | 3031884 | C | T |
| Osa08LNT0398900.1 | 8 | 3031887 | C | G |
| Osa08LNT0398900.1 | 8 | 3032400 | T | C |
| Osa08LNT0398900.1 | 8 | 3032462 | G | C |
| Osa08LNT0398900.1 | 8 | 3033223 | A | G |
| Osa08LNT0398900.1 | 8 | 3033701 | A | T |
| Osa08LNT0398900.1 | 8 | 3034054 | G | T |
| Osa08LNT0398900.1 | 8 | 3035626 | C | T |
| Osa08LNT0398900.1 | 8 | 3035940 | T | C |
| Osa08LNT0398900.1 | 8 | 3031849 | A | G |
| Osa08LNT0398900.1 | 8 | 3036790 | A | G |
| Osa08LNT0398900.1 | 8 | 3036817 | C | A |
| Osa08LNT0398900.1 | 8 | 3037399 | A | C |
| Osa08LNT0398900.1 | 8 | 3037569 | T | A |
| Osa08LNT0398900.1 | 8 | 3037962 | A | G |
| Osa08LNT0398900.1 | 8 | 3038151 | T | C |
| Osa08LNT0398900.1 | 8 | 3038788 | A | G |
| Osa08LNT0398900.1 | 8 | 3038850 | A | G |
| Osa08LNT0398900.1 | 8 | 3039250 | C | T |
| Osa08LNT0398900.1 | 8 | 3039772 | C | T |
| Osa08LNT0398900.1 | 8 | 3039933 | T | G |
| Osa08LNT0398900.1 | 8 | 3040615 | C | G |
| Osa08LNT0398900.1 | 8 | 3040705 | A | G |
| Osa08LNT0398900.1 | 8 | 3040711 | G | A |
| Osa08LNT0398900.1 | 8 | 3041050 | A | T |
| Osa08LNT0398900.1 | 8 | 3041676 | A | G |
| Osa08LNT0398900.1 | 8 | 3042441 | C | T |
| Osa08LNT0398900.1 | 8 | 3042539 | T | C |
| Osa08LNT0398900.1 | 8 | 3042540 | A | G |
| Osa08LNT0398900.1 | 8 | 3042712 | G | A |
| Osa08LNT0398900.1 | 8 | 3043057 | T | C |
| Osa08LNT0398900.1 | 8 | 3043180 | A | G |
| Osa08LNT0398900.1 | 8 | 3043244 | C | A |
| Osa08LNT0398900.1 | 8 | 3031598 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0398900.1 | osa-miR5526 | Cleavage | 5.0 | 13.015 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR5544 | Cleavage | 5.0 | 10.508 | 1 | 22 |
| Osa08LNT0398900.1 | osa-miR812r | Translation | 4.5 | 22.175 | 1 | 24 |
| Osa08LNT0398900.1 | osa-miR5805 | Cleavage | 4.5 | 14.481 | 1 | 24 |
| Osa08LNT0398900.1 | osa-miR5817 | Translation | 4.5 | 23.741 | 1 | 24 |
| Osa08LNT0398900.1 | osa-miR5837.1 | Translation | 3.5 | 19.604 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR5837.1 | Translation | 5.0 | 19.115 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR1440b | Translation | 4.5 | 18.04 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR1440b | Cleavage | 5.0 | 14.304 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR166d-5p | Cleavage | 5.0 | 13.945 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR395f | Cleavage | 4.5 | 15.393 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR159a.1 | Translation | 4.0 | 14.527 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR159b | Translation | 4.0 | 14.527 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR164c | Cleavage | 4.5 | 21.607 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR172c | Cleavage | 4.5 | 18.06 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR172d-5p | Translation | 5.0 | 21.563 | 1 | 20 |
| Osa08LNT0398900.1 | osa-miR395v | Cleavage | 4.5 | 14.409 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR820a | Cleavage | 5.0 | 15.6 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR820b | Cleavage | 5.0 | 15.6 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR820c | Cleavage | 5.0 | 15.6 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR444f | Cleavage | 4.5 | 16.4 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR444f | Translation | 4.5 | 16.15 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR1863a | Translation | 5.0 | 18.646 | 1 | 24 |
| Osa08LNT0398900.1 | osa-miR2101-5p | Cleavage | 3.0 | 23.676 | 1 | 22 |
| Osa08LNT0398900.1 | osa-miR2864.2 | Cleavage | 3.5 | 11.126 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR2866 | Translation | 4.0 | 14.312 | 1 | 20 |
| Osa08LNT0398900.1 | osa-miR5339 | Cleavage | 4.0 | 15.236 | 1 | 21 |
| Osa08LNT0398900.1 | osa-miR5340 | Translation | 3.5 | 16.547 | 1 | 23 |
| Osa08LNT0398900.1 | osa-miR5524 | Cleavage | 4.5 | 19.407 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0398900.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0398900.1 | 8 | qDTH8 | Physiological trait | Flowering | R1943 | R2976 |
| Osa08LNT0398900.1 | 8 | qPL8 | Morphological trait | Panicle/flower | R1943 | R2976 |
| Osa08LNT0398900.1 | 8 | qCTB8 | Resistance or Tolerance | Cold tolerance | nan | nan |
| Osa08LNT0398900.1 | 8 | cl8.1 | Morphological trait | Dwarf | RG20 | RG885 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)