© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0399100.1
CAGAGAAGATTTAGCTCTAATGGCAGACAAGAGTCTTACAACTTTAGCATAATTCCATCGAGCCATGGCACTCGATGGATATTGGCATTGAGTCCTATGATAAAAAGAGCAGCTTCAAAGCATGCGTAAAAGTTAAGGTCCTTTCTTTGGTGGACAAGTCATACATGAGTACATGAGACCCTCGCTGCTATTAGCAGCACAAGGAAACTTACTATTGAGATAATTCATCAACCAAACAAAAACTGGAAAAGTCGGTGCAGCGCGCAGCGGATTCATCCCCAGCAAATCACCACCCATCCTTCTTCAGCGGCTTCATTTTGCCTTCTCCTTGTCCTTGTCGGCAGCTTGGGGAGAGAACTGCTGGCCGGTGGAGGATGGTGAGTAGCCCGGTGCAGTGGGGGAGTAGCTTCCGCTAGGGCTGTAATTCGGAGATGTTGGGCTATAATCTGGGCTGGGCCCTCCAGATGTGGTGTATGGGCTTGTTGGGCTGTATGACGGACTTGGTTGTGAATATGATGGTGAGGTAGGTGAGTATGTCGGCGATGTTGGGCTGTAATTTGGTGAAGTCTGACTATAAGGGCTCAGCCTTGGGCTGCTTGGAGAGTACGCGTGGGAAGGACTGTACTTGGCCGAAGAAGGATTGTAGCTTGGTGAAGTTGGACTGTAATTTGGTGAAGTTGGGCTGTAGCTTGGAGATGTCGGGCTGTAACCAGGTGATGTAGGGCTGTATGCAGGAGATGTCGGACTGTACGAGGGTGATGTCGGACTGTATGAGGGGGAAGTGGGGCTGTAAGACGGAGATGTTGGACTGTATGATGGAGATGTTGGGCTATATGATGGTGATGTGGGGCTGTAAGATGGTGATGTGGGGCTATAAGATGGTGATGTGGGGCTGTATGCAGGAGAAGTTGGACTATATGCAGGAGAAGTCGGACTATAAACTGGTGATGTCGGACTGTAGCTCGGAGAAGTGGGACTATAACTTGGCGAGGTCGGGCTGTAACTTGGAGATGTAGGGCTATAGCTAGGTGATGTAGGGCTGTAGCTTGGAGATGTTGGCGAGTATGATGGACTGGTAGGCGAGTATGATGGACTTGTTGGAGAGTAAGTAGGAGAGCCAGGTGTATATGATGGAGAAGTGGGACTGTAGCTGGGTGAAGCAGGACTATATGATGGAGAAGTTGGGCTGTATCCTGGCCCTGGACTGTATACCGGAGAAGATGGACTGTAACCACCCCCTGACGATGGAGTGTAGCCTGGTGAAGGTACTGGTGAGAAAGCCATTCCTCCAACATATGGCGAGAACTGAGCATCTGTAATGGGGGAAGCCCTGATGTTTGGACTTAGCAGGTAGCTCGGTGACATCATTCCTTCATGATATGGTGTCCCAGAGATGGGCGAGCGTGCTGGTGTCATGCCAAAGTCCAGGCCTTCAACATAGCTTGGGAGTTGAAGTTCGATGGCCTGCTGCAGCATCTGATCATTGAGATACAATGCACAGCCTCCTGTACCGATAGGTGCAAGCTGGCCAAGCATAATGTTCTCAGTGACACCTCTCAGGTAGTCAGATTCAGCATATACAGCAGCATCAAGCAAGATATCCACCGTCTCTTCAAAGGAACATCTCATAAGAGGCCCTGTGTCATTACGGTTGATACCATGCCTTGTAATAGCCATCAGATGCCCTCTGTATGTCATTGTATCACAAAGAATGGCCAGATGTCTGTAATTGACATAAGAACCATCGAAAGATATGACCACCCGCAGCTCATCCAAGAGAGCTCGACGAACAGCCTCGATTCCAAGAACCTCAATTACTTCGATCAAATGGTTACTTGTTGTCCTAGTAGCATCAACATCTTCATGGCACATGACAGCCAAGAGATTAACACCTTCTGTATCAAGCATCCACTCATTATCTGCTTTGAAGCCAACATTGTCCTCAAATTTATTGACCTTCCCATATTTGATAAAAACTTTGTTAATATCTGGAATTCCACGAAGTGCCATCTCTGTCAACATGTTACTTTCAATCTTCTTGAGGAAGACATCATCCTCAGCAGACTCATCCTGTATTTCTCCCTTTGGAGCTTCATCATTTGTGATGCGGACACGAAGGATCAGTTTATCCGCATTATCATCATTAAATATGCATGACAAGTCATCATCAAATTCATGATTGATCTTCTCTGCAATATCAGCCATGCTCAACTTCTTATCAACCATCATCTCACGATTCAGCTCGATACGCAGCAGCCACGGTGAAATTTTATCCGGGTCAATATCCTCATCAGGCATTTCATAATAGGACCGGACAAATTCAACATCTTCTTCAATAATGGTTCCCAGTGGATCAGGATCATACCATATCTCTGTAGCATGTGTCACACTGCGCAGAGTAGTGTACTCTAAGGCACATTGGACATTCTTAGCCAGTTCTTTCTTCTTGTTCACCTCAGGCTTTAGGTAAACTGACAATGATGGAGTTTTTATCTTCTTAGCAACATTAATGATCTCTCTCAGCCTGGGAACTCCAAGAGTGACATTCTTGGCACTGACACCAGCATAATGAAAAGTATTCAGGGTCATCTGAGTTGCCGGTTCTCCAATGGACTGTGCAGCTACGCATCCAATCATTTCACCAGGAGCCACCAAAGACTGAAGGAATCTCGATTCAATCTCACCAATAACCCATTCAAAAGCTTCCTTTGTAAGCCTGTACTCCTTCAAGACCCTCTTGCTAGCGAATGTGCTTCGAAGCAGGATATTGAAGAACAAAGTTGCATTCTTCTGAGCCTCAATACTCATAGCATCATCACCAGGAACAACCTTCAGTCTTTCTTGCAGCTTATCTATTGCCTCCACAATTTCCATTGGGTGCATGTCAGAAGGCCTTCTGAGATCAATCTTGAATGTCTTCTGTGCATTCCAGATAAGCCGTTTGAGGTTGACAGGCATAGGCCATGTATTATCACCAGTTGTGGCAATCTCAGAACCAAGCTGGAACCGGTCAGCTTCTAGCTTCTGAACCTCTGCTTCAAACACATTTCTAAACTCACGAATGGTCTTCAAATCATCAACATGTTCTGGTAACATGTAATTTGGCCTCCAGTTCTCATCGTCCAGTTCATAACGAAATACATTATCAAACTCACCCTTCTTCATCTTCAAGGAATCCAACTTCTGTGACTCAATCCAAACAGCATCCATGCCATCTTCTCCATATAAGAACTGAATGACGTCTCCCAAGGAATTTCTTACCGTACCATCATATTTCACTATGATATCTTCCATAGCCTTCACAAGTCGTCGCTGGATATATCCAGTCTCAGAGGTCTTCACAGCAGTATCAATCAGACCTTCTCTACCACCCATAGCATGAAAGAAAAATTCTTGTGGTGTCAGACCTCTAAGGTAAGAGTTCTCCACAAACCCACGACTTTCAGGACCATAATCATCTTTTGTGAAGTGGGGCAACGTTCGATCAATGAAGCCAAATGGGATCCGCTTGCCCTCAACATTCTGCTGTCCGACACAAGCAGTCATTTGAGAAATATTGATGAAACTTCCTTTTGAGCCTGCAGTAACCATAGCCTTCAGGTTGTTGCTTTCAGACAAACTCTTCTGGGCACTACTTCCAGCATCATCACGAGCCTTGTTAAGAACCTGATTTACTCTATTTTCGAATGATTCCATCATGGTGCGTCCTGGCTCAGCTTCCAATTGTTTATCATGAGCTTGCATAATAAGCTCCTTCACATCATCTTTAGCTTTTGAGATTGTCTCATTAATCTTCACCATGGTGGCAGCATCTGCAATTGTATCCCCAATTCCAATACTGAAACCATTTTGCAGAAGCCAGTAGTTGACTAGCCACTGTGTATGACCTAAGAACTTGCGAGCAGCATCTGGACCAACCTCTTCCCAAATAACATGAATAAGACTTCCAGTTGATGTCCCAAGTGTCTTTTTGCAAAGTGTACCAGATAGAAGCTCTCCCTTCTCTATCCGGACCATAGTATCACCAGGAGTAATAAATCCTGTTTCAGCTTCAGAATGCCAGGCTGAAAATCTAATTAAATTGATTGGCTTGGGAATAATCAAGTTGAAAACTTGTTTCCCAGTCCAAATAGGCCTTGGTTTCAAAATGGCAGGGGCAGGGACCTTTCCATCGAAATCTTCCCACCACATTAAGATGTTCATAAACACATCCTTTTCAATAAGAGTATCTCTTTTAGTAATTTTGCGACAGCCAAGAAGCGTGTCCTGGACAATACCCATAACAGGCCTATTCGACTGAGGAGACACAATACATTTTGGAACCATCATCAACTCTAGAACTTCAGCTCTGGTCTCAAATGACTGCGGAACATGCATATTCATTTCATCCCCATCAAAATCTGCATTGTATGGTGAAGTAACGGACAGGTTTAGGCGAAAAGTTGAATACGGCATGATTTTAATGCGATGCCCCATGATAGACATTTTGTGAAGACTGGGCTGCCGGTTGAAGAGAACAAAATCCCCATCATTGAGGTGCCTTTCCACCTTGTATCCCAGCTCCAGATGCTGATCACTACTTTTCTTCACATAACGAAGATCAAGCCTCTGACCGTCTTCCCTGATAATATACTTTGCACCTGTCTTGCCAGGGGGAGGGTGAGGCCCATATTCAACAAGCTCTTTCAATCTCTCGATGTTATATGGAGTGACAGTTTCTGGGTATGTCAAGTTCAAAGCAATACTCCATGGCACTCCCAATTCATCAATGTTAATATTCGGATCTGGTGTGATGACAGTACGAGCTGAGAAATCAACACGCTTTCCCATCAAGTTTCCTCTAATGCGGCCTTCCTTTGCTTTCAGCCTGCTGCAAATTGATTTAATAGGCCTTCCAGAACGCTGTGTGGCCCTTGGCTGGCCAGGAAGTTCATTGTCAAAGTATGTTGCAATGTGAAATTGCAACAATTGAGCAAACTCTGTTATTATGTGAGCTGGGGCCCCATTTCTCTCTTGCCTCCTCAAGTTCTCATTATGTCGAATTATCATAGCTAATTGATGAGTCAAATCATCCTCACTTCTGGAAGAGGTATCCATCATGACAGATGGCCTCACAGGGGGTGGGGGAATTGGAAGGACTTGCAAAATCATCCAGTCAGGGCGGGCAAATTTAGGGTTCAGACCCAATAGAAGACAGTCCTCATCACTTATACGTTTAAGAACATTGAGCACCCTCTCAGCTGAGAGGATTTGCTTTCGCTCCACTGGTTCAGGGAGTTGCTCTTGATCATCGTTTTTCTTCTTTGGTGCTTTAAACTCTGCAACCATCTTCATACCATCAACAGTGATATTTGGCTGCTGAGCACCACAGCCACCCCTTTTCTTTACTGGCTCATCAGTATCTTGCTGCTCCTGAACATCGAGGTCATCACCCCCCGCGCAAACTTTTTTGCTCTTGCAAGCATCATATATTCTTTTCAGTCTATTTTTTGGGTTCCTTATTTTAAGAGCCTGCTTGAACTTGGTATCATCCTCATCCGCAAGGATCTTGGAACAATTGAAGCAGACGCAACGCATTATGGAGAGTACAGTCTTGATGAAGCCGATATGGAACATTGGCTTAGCAAGCTCAAGGTGGCCAAAGTGGCCTGGGCACTCCGCCATCCCAGCCATGCATGTCTCACATTTGATCTTCTGGTCAATAGTCCCCAACCGAGGGTCACTCAAGCCACCAGGCTTGGGCTTCCCCCTTTCCATGGTTTCTGCATGCTCTATCTGCACCACTGACATTTGCCTGATCTCGTCGGGGCTGAGGATGCCGAACTGCACCAGCTGCACCTTGGCCACCTCGGCCGGCGAGTACGGGAACCTCGCATCCATCTCTCCCGCCGCCGCAGCCCACCACCTAGGGTTTCAGATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0399100.1 | 8 | 3224376 | A | T |
| Osa08LNT0399100.1 | 8 | 3224446 | G | A |
| Osa08LNT0399100.1 | 8 | 3224979 | T | C |
| Osa08LNT0399100.1 | 8 | 3226447 | G | A |
| Osa08LNT0399100.1 | 8 | 3226846 | A | G |
| Osa08LNT0399100.1 | 8 | 3226897 | A | G |
| Osa08LNT0399100.1 | 8 | 3226624 | T | C |
| Osa08LNT0399100.1 | 8 | 3225168 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0399100.1 | osa-miR5528 | Cleavage | 5.0 | 14.286 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR5812 | Cleavage | 4.5 | 17.111 | 1 | 24 |
| Osa08LNT0399100.1 | osa-miR5837.1 | Cleavage | 5.0 | 12.361 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR6252 | Translation | 4.5 | 15.438 | 1 | 23 |
| Osa08LNT0399100.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 11.15 | 1 | 20 |
| Osa08LNT0399100.1 | osa-miR319b | Cleavage | 5.0 | 11.15 | 1 | 20 |
| Osa08LNT0399100.1 | osa-miR162b | Cleavage | 5.0 | 22.383 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR171c-5p | Cleavage | 4.0 | 9.245 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR166g-5p | Cleavage | 4.0 | 20.907 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR413 | Cleavage | 4.5 | 17.231 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR413 | Cleavage | 4.5 | 17.273 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR817 | Translation | 4.5 | 23.316 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR817 | Translation | 5.0 | 17.412 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR1855 | Translation | 5.0 | 13.45 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR2106 | Cleavage | 4.0 | 21.698 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR1863b | Cleavage | 5.0 | 18.904 | 1 | 24 |
| Osa08LNT0399100.1 | osa-miR5081 | Cleavage | 4.5 | 15.827 | 1 | 22 |
| Osa08LNT0399100.1 | osa-miR5144-5p | Cleavage | 5.0 | 20.279 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR5340 | Cleavage | 4.5 | 17.98 | 1 | 23 |
| Osa08LNT0399100.1 | osa-miR5340 | Translation | 5.0 | 14.689 | 1 | 23 |
| Osa08LNT0399100.1 | osa-miR171c-5p | Translation | 4.0 | 16.666 | 1 | 21 |
| Osa08LNT0399100.1 | osa-miR5507 | Translation | 4.0 | 14.71 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0399100.1 | 8 | cl8.1 | Morphological trait | Dwarf | RG20 | RG885 |
| Osa08LNT0399100.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0399100.1 | 8 | qRRE-8 | Resistance or Tolerance | Other soil stress tolerance | C166 | C1121 |
| Osa08LNT0399100.1 | 8 | nan | Physiological trait | Flowering | C166 | C1121 |
| Osa08LNT0399100.1 | 8 | qDTH8 | Physiological trait | Flowering | R1943 | R2976 |
| Osa08LNT0399100.1 | 8 | qPL8 | Morphological trait | Panicle/flower | R1943 | R2976 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)