>Osa08LNT0399200.1

CCCAGCGCCGCAGCAGCAGCAGCAGCAACCCCGCGCCCGCGGCGGCTACCTCTCCCACCACCTCGTCGTCGTCGGAAGCTTCTAGAAGGGTCCAGAAGCAGCAGGGACCCACCAGATCTACGCGAGGGGGATCGCGATGCAGAGGAGGAGAGGAAGCTCGCGAGGTGTTCGACGAATCGACGAGGCGAAAGCGGGGGCGGAGAAATTCGGCGCAGGTGCGCGACGCGAGAGCAAAGCCACGCCACGGGGGATTTCGAACACGGGGTGTTTTCCCCTTTTTTGGGTTTGAATTCGGCGGAATTTTGGTTGGATTTGGAATTGACTTGCATTTAACTTTAGTTTTGTACTTTCAGC

Explanation	CPC Score
noncoding	-1.14642

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0399200.1	8	3318852	C	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0399200.1	osa-miR5503	Cleavage	3.5	22.508	1	22
Osa08LNT0399200.1	osa-miR166i-5p	Cleavage	5.0	15.07	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0399200.1	8	nan	Resistance or Tolerance	Other soil stress tolerance	C390	C1121
Osa08LNT0399200.1	8	qDTH8	Physiological trait	Flowering	R1943	R2976
Osa08LNT0399200.1	8	qPL8	Morphological trait	Panicle/flower	R1943	R2976
Osa08LNT0399200.1	8	cl8.1	Morphological trait	Dwarf	RG20	RG885
Osa08LNT0399200.1	8	nan	Physiological trait	Flowering	C166	C1121
Osa08LNT0399200.1	8	qRRE-8	Resistance or Tolerance	Other soil stress tolerance	C166	C1121

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus