© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0399600.1
CCTAATGGATCGTTAACACATCTCTCCTGCTCACCCACGTCTCTGATAATTCCAGTACAAAGGTGATAATTACACAATGTAAATACATCGCCATAGCCAGCCCACTCTCCAGGCAACACCAGCTTCCCAGAGCTGCAGATTACGATGCGGCAATGCCATGGCTCTGATTGCACAACTGCACATACCTGCTACCTGTTGTGCTATCTTCTGCACAATGCAATGCAATAGATTAGTAGTATATTATATTATGCAGGAGGCTCTCTACCAAAATGAAGAGGGAAAAGTGGGCAGCAGAAAGTATCAGCATGGGCTCAAGAGGAAAAAGGTAAGAAGAGCAAACTCTGTATCCTGTGCTAGGTCACATTCTAGCATCACTACCATTTTCACAAATGTAACTCAACAGGAGCAGCAGCAATCTACATGACGATGATGATATTAGTTATATAAGCTTATAATAACTGCATCTCACTCCAAGCAAAGAGGAGACACAGATAAAGAACTCTTATGTAAAGGGAAGATAATACGCGGAGGCAGCCTCATCCTTCAACAGCAGCTGCACCATCGTCCACCGCACCTGGATCAGTAAAGTGTATCTGAAGACCAAAACAAGAACCATCACGGCACCTTTTTAAACACATGAAAGGCTTGAATCAGATCATACAAGTAGCAGTCAGAAAAAAACGTTAATACCCCATGTGAACTACCAATTCCTGTTTATAGCATCCAAGTGAGCAAACGAAAAGCATAAACCTTCTCTTGCATTTAGCATGCCCCATTAGTGCTCGGGGTGAACAATGTAACATAGCTTGAGAGCTATGTTCACATAACAGTGTTCACAACAGACTGCCTGGAACACATCCTGTGTTAACAGCAAGCTACCACCACTGTTAATAGTAGCTACAGAAATTGTCAAAACATTCTAGATTAGACAATCTCCACAATAATCATGCAATAATAAGTTTAAAAGTAAGCATTAGCTGCCATGCACGATAGCTAAGATTTAAAATATGAGCCGCGCATATGGAAGAACCAATCCAAGAATAGCACTGTGGTCTGCAAACCCATGAAAGCTGCACTTGTCAAGAAAATCCCTACATCTGTTCCGCCCCTCAAATAACAGAGTACTTTCCAGTTTGGGCAGAACCAGGAAGGTTCAGAGCATGGTTGGCACAATCTTCAAGGACACGCTTCAATTCTGCTTTCGCCTTCTTGACAGATAGCTCAGTGGGGCCCTCTATGAACAGGTACAGCTTGCGTTCATTAGCACCAACAATTTTTCCTTGAGGAAAAAAGGTTCCCCTTGTAGTGATTGCAGCACCCGTCCATTCCTGGATAGGACCCAATGTTTCTTTGTGAGTGATCTTCCAGCGGGCATTTTGTGGGAAATCATTAATCTCAAGCTCAGCCTCATAATGTTCTGGGACTGCATGTGCTTGTATCCTTGCCAGATTTTGCTGTATGTTAAATGCAGCCTGCAGTGCACGTGCTGTGGCCTCGTTATTCTGTGTGTTTGAAGCAATGGCTAGAGGAAGCAAGGGCCCTACAGAAGTGCCTTGTGTTTGCTGGTTGGCATTGCTAGCAGCCTTTGCTGCAACCATAGCAGCAGCAGCTTGAGCAGCAGCAATAGCTTGTGCCGCAAGGTCACCTCCCGCCTTACGAACCCCTCCTTCCTCATCAGAATCTGAATCTGACTTGTCCTCCTCATAACCATATTCCCTTGCCTGAGCCTTCTTTGCAGATTTCCGTGCTTCATCCTCCTCTTCATTGAACTTGAAACCGCTTCCACCATATCCTGTTCCATGGGCCTGCTCTGTTCCCTGCTTCACCTTTGCCATAAAACGATCAGCTAGACCTTTCAGGTCCTCTGGAACAGCCTGCTCTGAGAGCTCCAAAGCTTTAACAAGGTCTGGAGCATAACGCTCCTCTTCCTCAGAAATAAAAGTCACGGCAAATCCCTTCCTCCCAGCACGTCCAGTTCGTCCAACACGATGAACATAATCCTCATAGTGGTTCGGGACATCATAATTCACAACAAGCTCAAGCTCCTTGACATCTAAACCCCTAGCAGCAACACTGGTAGCAATCAGCAAGCTGCACACATTGCTCTTGAAATCAGCTAGTGTTGATTCACGGTCAGTCTGGTCTTTCCCACCATGCAGGGATAGGCATGGATATCCATGCTGGAACAGGTCTTTGAGTAGAGAATCACATTTATCTTGTGAATGGACAAAAACAAGAATTTTACCTTTATCAAACCACTCTCCAAGCAGCTCCAACAGCCTAAAGAACCTCTCATTTTCTGGCCGCACCTCAACCAGTTGTGTGATATCTTTGTTGACGACACTCCTCCCACCCACCTGGATCTCAACAGGCTTTGTCAGCACCTTACGGGCCAGTATCTCCACCTGACGTGGAAAAGTGGCTGAGAAAAGAACTGTCTGCCTATCTGGACGAGTATTCTGAACTATCCGAGTAATCTGAGGCTCAAAACCCATATCAAACATCCTATCAGCTTCATCCATCACCAAGAATGTAACTCTCCGAAGATTAGTAATCTTCCCACTGCTTGTGCAAAGAATATCAATCATCCTGCCTGGTGTACAAACAACAATTTCAGCACCCCTCTTCAGTTCACTGATCTGCTGGGCAACTCCAGAACCTCCATAGATAGCAACACAGTTGATGCCAAGCGCCTTCGAAAACTTCTTAATGTCTGAATGTATCTGCACCACAAGCTCTCTAGTAGGAGCCATTATAAGCCCAATTGGGCCATCTCCAGGAACAACAGCCGGCTGATCTTTGACATGCCTCAGCATAGGCAGGACAAATGCTAGAGTCTTGCCTGATCCAGTCTTTGCAATTCCTATACAATCACGCCCACTCATTATGATCGGCAGTGCTTGTGCCTGTATAGACATCGGTTTCTCGAAACCAAGTTTCTTGATTGTATCAAGGAGCTTGCTGGTAAGCCCACTCTGCACCCATGTCTTTATTGGCTTGGGTACATCTTTCCCATGCACCTTGAGCTCCAACTGCTTCCGATAAGCTGCCACTTCCTCAGCTGCCATCTTTGTAATATCCTTCACCTCAATGTAGAAATTCTTCCGGAACGGCTGGTAGTCGATCTTAGAATGGTCAACAATAGCCAACTTTTCTGCCTTTGTCTTCTTGACACGTTTCATGAACTCCTCATCATCCTCATCTTCGGAACCACCCTCATCATCCTCGTCATCTGCATAATCCGAGTCTGAGTCTTCTCCTTGTATAATTCTCCCCATCACCTTCTTTGGCCCCTTTTTATCCCCATTAGTCACAGCATCCTTAGCACTCTTATCATTCTTGTCATCCACATTGGCAGCAGGCATGCTCTCAAGCTTTGCGACCTCAGGCAATACCATCGAGTTCATGAACGCATCAAGCGGATCAATCTCATCTTCATCCATAGCATTGGCGCCGTTTGCATTATCACCCCCATTTGGAACATCAACGTCCATGGCACCGGCACCAGAACCACCATTATCATCGGATTTCTTACCATCCTCTTGGTTCCCCTCCTCATCAGACTCCTCGCCATCCAAGGTCCACTTCTTCCCGGCATTGCCGCCATCTTCTGCTTCTGCGGGGGCCGCGGCGGCGGCGGCTGAGGTGCCAACTCCGGCCTCCTCCTGCTCGCGGCGCTTCGTCTCCTCCTCGCGGCGCTTCATCTCCTGCCACTCCTTGATGCGGCGGCGCCGCGTCTCCATCTCTTCGTCCAGCTGCTTCTGCTCCTCCTCCTTCTTCTTCTGGCGCCGCCTCTCGGCCTCCTCCACATCCACCACCTCCTCCTCCCTGGCCCCCGAAGCCGGCCCCTCCGGCTCCGCGTCGCGGTGGTGGTGGTGGTGGTGCGACGACCGGCGGCGGCGCTTGCGGTCGCGGTCCACATCCTCCTCCTCCTCCTCCGCCGCCGCCTCCCGCCTCCTCGACCTCTCCTCGCGGTCCCTCTCCTCGCGCCGCCGCGCACGCTCCCTCTCCTTCTCCTTCTCCCGCTCCTCCCGCTCCCGCGCCTTCCGCTCCTCGCGATCCCGCTCCTTCTCCCTGTGGCGGCGCTCCCGGTCCCGGTCCCGATCCCGGTCGTCATCCCGGTCCTCGCGGTGGTGGTGGCGAGAGGAGGATCTCTCGCGGTCGCGGTCGCGGTGGTGGCGGGAGGAGGACCGCTCGCGGTCCTTCTCCTTGTCGCGGCGGTGGTGCTTGGAGGAGCCGGCCTCGTCGCTAGACCCCATGTCGGCGGCGGCGGCGGGCGGCGGCGAAGCTTGGAGAGGAGGAAACCCTAGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0399600.1 | 8 | 3514048 | C | G |
| Osa08LNT0399600.1 | 8 | 3514633 | A | G |
| Osa08LNT0399600.1 | 8 | 3515297 | A | C |
| Osa08LNT0399600.1 | 8 | 3515363 | A | T |
| Osa08LNT0399600.1 | 8 | 3515445 | T | G |
| Osa08LNT0399600.1 | 8 | 3516400 | C | T |
| Osa08LNT0399600.1 | 8 | 3517484 | A | G |
| Osa08LNT0399600.1 | 8 | 3518048 | A | G |
| Osa08LNT0399600.1 | 8 | 3517908 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0399600.1 | osa-miR5793 | Cleavage | 4.5 | 22.163 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR5821 | Translation | 4.5 | 21.718 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR5836 | Translation | 5.0 | 18.711 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR1861o | Translation | 3.5 | 20.611 | 1 | 22 |
| Osa08LNT0399600.1 | osa-miR166b-5p | Cleavage | 4.5 | 22.515 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR1858a | Translation | 4.0 | 9.976 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR1858a | Translation | 4.5 | 17.176 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR1858a | Translation | 4.5 | 11.787 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR1858b | Translation | 4.0 | 9.976 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR1858b | Translation | 4.5 | 17.176 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR1858b | Translation | 4.5 | 11.787 | 1 | 21 |
| Osa08LNT0399600.1 | osa-miR1861a | Translation | 3.5 | 20.611 | 1 | 22 |
| Osa08LNT0399600.1 | osa-miR1861n | Cleavage | 3.5 | 20.611 | 1 | 22 |
| Osa08LNT0399600.1 | osa-miR2864.2 | Cleavage | 4.0 | 19.77 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0399600.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0399600.1 | 8 | qDTH8 | Physiological trait | Flowering | R1943 | R2976 |
| Osa08LNT0399600.1 | 8 | qPL8 | Morphological trait | Panicle/flower | R1943 | R2976 |
| Osa08LNT0399600.1 | 8 | cl8.1 | Morphological trait | Dwarf | RG20 | RG885 |
| Osa08LNT0399600.1 | 8 | qRRE-8 | Resistance or Tolerance | Other soil stress tolerance | C166 | C1121 |
| Osa08LNT0399600.1 | 8 | nan | Physiological trait | Flowering | C166 | C1121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)