© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0036500.1
CACCATTCAGAGCAAAGCTTTCAAGCGCGCTCTCACCCTCCATTCCACCATTCTTAGTAGTAGTGACTTTAGCCTACCTTGCATAGTATATTGAAGCAAGGAGTTGTGTTATAACGCTGTGTAAGGCTCAAGTCAAAATACAGTAACATGGCTATCTTCGTGCTAGAGATCAAGACTCCATTATAAAAACTTCCTAGGGCAAGTACACAAGATTAAGGGGTTGTTTGGTTGATGTCTAAGCTTGTCATAACTAAGCTTAGGCAAGTTGTGGCATGTGGCAAAAGTATGGCTAAGAAATAGTTAGCCACAAGTGTGGCAATATTAGCTCTAATTATCTGAGTATGATATGTAGTACCTAAGGGTAGGAAAGTGTGGCATGACATAACTGTGGCATTGAAACAAACACACGACTAAAAACTGTGGCATGACTGAAGTGTGACGTGGTAAAGTGAAGCAATCAACCAAACACCTCCTAATTTCAAAAAGAAGAAGAAGAAGAAGATGAATTCAGCCTACTTACTTTGAGTGGGTGTTGATATGAACTGAGCTTATTAAATGATGAAAATGAAACGAGCAGAGAGTTGATCAATCCGTGTCGAGTCAATATCGGCCATGCTGTGATACAGTGGTAGCATCTGCAGCCAGCTACGAGATGATTGCACCGATTGTTTCCTCTGGCCTCGAGCCAAGGATGTAATTACAGTACGTAATTGGTGCTATTCAGGCCAGTTTTTTTAAGCTTAGATTAAGTTGCGCGGCGGGCCAGGGAGCGGCCGTAGAGTATTTGTTTTAGTAATTTAGGGTTTAGCTAGGCATGCACGAGCCAACGTGGAGAAGATATCGTTCATGTGCAAAACGGCAAATCTCTTCCCTTCCTACGTACTACTACTACTAGCGTCGTCCAAAATTTGCCGACCGAATCCAAACTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0036500.1 | 1 | 30915346 | A | G |
| Osa01LNT0036500.1 | 1 | 30916101 | T | C |
| Osa01LNT0036500.1 | 1 | 30910440 | A | G |
| Osa01LNT0036500.1 | 1 | 30910487 | T | C |
| Osa01LNT0036500.1 | 1 | 30910499 | T | C |
| Osa01LNT0036500.1 | 1 | 30910661 | T | C |
| Osa01LNT0036500.1 | 1 | 30911044 | T | C |
| Osa01LNT0036500.1 | 1 | 30911046 | A | G |
| Osa01LNT0036500.1 | 1 | 30911478 | G | A |
| Osa01LNT0036500.1 | 1 | 30911855 | T | C |
| Osa01LNT0036500.1 | 1 | 30912010 | T | C |
| Osa01LNT0036500.1 | 1 | 30912041 | T | C |
| Osa01LNT0036500.1 | 1 | 30913538 | G | A |
| Osa01LNT0036500.1 | 1 | 30914045 | A | G |
| Osa01LNT0036500.1 | 1 | 30914490 | G | T |
| Osa01LNT0036500.1 | 1 | 30914693 | A | G |
| Osa01LNT0036500.1 | 1 | 30914748 | T | A |
| Osa01LNT0036500.1 | 1 | 30914751 | A | G |
| Osa01LNT0036500.1 | 1 | 30914771 | A | G |
| Osa01LNT0036500.1 | 1 | 30914850 | T | C |
| Osa01LNT0036500.1 | 1 | 30915735 | T | G |
| Osa01LNT0036500.1 | 1 | 30916043 | T | C |
| Osa01LNT0036500.1 | 1 | 30916349 | T | C |
| Osa01LNT0036500.1 | 1 | 30916397 | A | G |
| Osa01LNT0036500.1 | 1 | 30916526 | A | G |
| Osa01LNT0036500.1 | 1 | 30917291 | A | G |
| Osa01LNT0036500.1 | 1 | 30917293 | T | G |
| Osa01LNT0036500.1 | 1 | 30917554 | T | C |
| Osa01LNT0036500.1 | 1 | 30917803 | A | G |
| Osa01LNT0036500.1 | 1 | 30916221 | C | T |
| Osa01LNT0036500.1 | 1 | 30913946 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0036500.1 | osa-miR5543 | Cleavage | 3.5 | 17.791 | 1 | 21 |
| Osa01LNT0036500.1 | osa-miR5516b | Cleavage | 4.0 | 24.527 | 1 | 21 |
| Osa01LNT0036500.1 | osa-miR396a-5p | Cleavage | 5.0 | 20.776 | 1 | 21 |
| Osa01LNT0036500.1 | osa-miR396b-5p | Cleavage | 5.0 | 20.776 | 1 | 21 |
| Osa01LNT0036500.1 | osa-miR396c-5p | Cleavage | 5.0 | 20.776 | 1 | 21 |
| Osa01LNT0036500.1 | osa-miR167h-3p | Cleavage | 5.0 | 12.987 | 1 | 21 |
| Osa01LNT0036500.1 | osa-miR167h-3p | Cleavage | 5.0 | 15.845 | 1 | 21 |
| Osa01LNT0036500.1 | osa-miR1435 | Cleavage | 4.5 | 22.98 | 1 | 20 |
| Osa01LNT0036500.1 | osa-miR1850.3 | Cleavage | 5.0 | 17.917 | 1 | 22 |
| Osa01LNT0036500.1 | osa-miR2867-5p | Translation | 5.0 | 15.037 | 1 | 22 |
| Osa01LNT0036500.1 | osa-miR5516a | Cleavage | 4.0 | 24.527 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0036500.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0036500.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0036500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0036500.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0036500.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0036500.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0036500.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)