© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0400200.1
ACGTGAACAATGGCTTTTGCATTCACCAACTCGTGAGATAAATATACAGGCTTATACAAAAGGACGGCTGCCAACAACGTGGACCTCGCGGACAAAATATACAACCGGGCCCACACTGGGGTAACATTTTGACAACAAAAGAAATTTGCCGTTACAAGAACCACTCCCTCAGCAATCTAGAATCTAACCAAGCTGAGAGGTGGAGCCAAAATGGCGCGGAAATAATTATCTACCTGGCATTGAGACTACAATTAGCTCAAAGTTTGGGGAAATGAAGAAACCGCTACCCGCGCCGCTTCCACAGCACGAACACCTGTACAGTAACTTTACAAAGGGGTAAGAATTTTCTGCAAAAGCTACCAGCCTAATTTCAACATCATCCTGGTCCTGAATTTGAAGGATGAGCATACACACTGCCTTGAACAGCAGGCTTCTGCTGCTGTTGCTGCCGAGATTGCAGCTGCTGCCTCTGCCCACCAATACCATGCCCATGTATAGGCACGCCACCTGACATTTGCCTTTGCAACATGCCTTGGCTAGACACTGACAACAGCATTTCATTTCCAACAAAGGTATCTTGAGGCGAGCTAGCTAACTGCGAGGTTGATGGAACTGTAGTTGGATCATGAGATGACTCTTGTCTCCGCTGGTTTATAGATGAAACACCACCTGGGCTACCTGAATCTGTACTCTTTGCAATGGATGTGGAGGGAATTGCCTGATTATGTTGAACTTGGTCAACAGGTGATTCTATCCTACCATCAGTGTTCATATGACGGTTTTGTTGCATCACCAATCTCTGGATGTTGTTATGTGATGGATTCATGTACCGTTGTTGCTGCTGCTGTGCCAATGGAGATGACGAATGAAGTGGAGCTTGTTGAGAAGTTAACATAGTCTGGTTAGGAGAACCCTGCATTGAGCTTTGACTACCTACATCTGATGTTTGTATTGGTGAATGAGGCATCTGAGACCCATATATCTTGGGTTGATTACCAGGTTGAACCACTGATGGAACCAAGCCCTTATTACCAGCAAAATACCCCGGGCCCTGTTGCACCATACTTTTATCAGAAACTTGGTTTTTAGAGGTTGTAGAAATACCGCTTGCTTGAGTGGCATCAACTGGTGAACTCTGGTGCATCATATTCCCTCGGCCTAAGCTCTTCATAAGCTTAGCTTGCTGGCTACCTTGATTTCTTTGCTGCTGGTTTTGTCTAGACTGCTGCTGACCCTGTTGCTTCTTCTGCTTATGCGATGTATTAACAGGCTGGTTGGGAGGCACTGAGCTATCTAGTGAATTTTGTGCCGGATGCTGCTGTTTATGTTGTGACTGCGAAGATGGGATAGCACTGGAAGCTGGCCCTTGGCTCTGCTGTTGCATTTGTGAACCATTCTGTACAGTCGACACTGCACTGGCTCCAGAAAGTGGGTGCTGTTGTTGGGTCATCATGCATTGTTGCATGTGTCTATCTTTAGCCAAGCGCATAGCATAAGCCTGCTGCTGTGGGCTTGACTGGGTTGTTCCTTGAATATGGGGGTGATGTGTATTTCCAAGCACGTGTGATTGTTGTGGCATCTGATGTGGTTGGGATGACTGAACTGGAAAAGGTTGACCAGGTGAAGATGCTCCGACATTGGAAAATGGAGTACCACTGAAATGAATGGACTGGTTATTTCCCTGCGATACTTGCATCTGAAACTCCTGCATCATCTGCCTATGTTCTTCCATGTTCTGGCCAGGCCGAAGCATCTGCATTGGATCGCGTGGCCTCAACATAGTATTTCCATGGCCAGGTATGGTACCAGGATGAACATTCACCGTGTTTTGCATGCCTTGCCCATTGTTGGGAAGCATGTTTCCAGGTGAAACCATATTTAGCATTCCTGAGGAACCAAGCCTTGGAAAGGGCGGCCTGGTCACTGGAGTACCACGATTTAGTCCAGTCATCACCCCCATACCATGAGCACCAGGCATCATCCGAACACCACGATCAACTCCAGCAGGCGCACCAGGAACAGGCACCCCAGGTTGCTGAAGACTTCTGCTGTTGAGCATCTGATTGTACTGGATTCTTTGTTGCTCATCACCCTGCAGAGAGGTAGGTCTAGGCATTCCGTACCTCTGAGAATCCCTAGGAGTATTTGGTGTTGAAGGTGATGGCAAAGTATTGCCTAAAACCATACCAGGAGACCCTGGTAGCCTAGTATTCATATTACCAGTAGGAAGGGTGGGGCCAATGGAACTGGGATGGTTTGGAAGCATTAAACCACTTGCATGAGATCCCGAGTAACCAATAGAAAGTGCATCCGGGTTTGGAGTCATTGCATCACAAAGATCAAGCGGCATCAAAATGACTCCAGGTGCACATGCTTGAGAAAGTGCATGAAGATGAGAAGAATGGAGTGGGTTTATCTGCTTGAGCTCTTGGCTCTCACCCTTTCTACGATTTGGATGCAACTTTTGACCAAGGAATATTATTTTCTCGAAGTGTGCCTTAAGAGTCTCTTCCTCGAACGGTCCTTGAAGGCGCTGGAACAGGTGTCTAGCACTACCCTTTGGGATGCCAGGCAATGTGGACTGATAGTGTTGTGATGAGCCCGAGTCATCTGCGCTATCCGCACCATCACCTGAACCTTTTTCTGTGAGAAGTTTATGGCGATCTTTACACTCGTTAGGCCTTCTATATATACACTTCAATTGAACAATGCTGTTCAGTGCGTCACTAACCAGTTCCCAGTTTTGACCCATATCATGTACAAGCACAACAAGAGCCTGATCCTCAAAGCTCGACCATGGACTTCCAGGGCCTGAGTGACTAGCAGCCATCTTGAGCACTTTATTTTTTCTCCCACGATCCCGGTTTGTAATGATCTTTATAATCTTAGTAGGATTTGCCATATTACTCATTTGTGAAGCAGCAGGAGATACCATTGGGCCAACTGGTGTAAGTGCTTCTAATGAAACATCTGGTGCTTGGTTCATCAATTTAGGCTTCTTGGCAGCATGCTGACCATTTATCACAATATTTCCATTTGAATCGAATTGATGGACCTCTGATCTCTTCTTCAAATAATCCTTCTTCCCAGCAATCAAAGAGCAAGACTCAGCGACACTTTGAGGTGTCTTGTATCCAGGGTGCTTAGACTTTTTCTTCTTTTTTGACTTAGTAGATACCTCACTGCCATCATACAATTGTCTATCAAAATCAACTGTCGATTCAATATCCACATTCTTCCTTGGAAAAGATCCACCATGCAATGAACTTTGGTCATCTTGACAAGAGTTTGTGTCTCCACTAGAAGCATCTGTTTTACTTGTGAATGCAGTGGCTCCAGAAGCATTAGCAGGATATGGGCTTACAACTCGTTGTCTAGCAGCTGTCCGGATGCGTTTTGTAGGAATATTAAAGAAATCTGAAGGTCTTTTTCCATTTGATAAAAATGGCTGGTTTCCTGGCTTGCTCTCCACATATGGATCATAAGGCATGTCAACACCAGTACTGTAATGCCTTGTGCCATTCATCCTCTGCTGCATAAGGTGTTTCTTTTTGTGACTCGATTTTGATGGCAAACCATCATCATATGTACCATGCAATACATAAGTGGATGCCTCGACATCATCATCTTCATATGCATGTCCCCTATGTGCATCTGCAACAGAGCCTGTTGTAGATGGCTCATAATCATTCTTCTGTCGAGAGTTATTGGTTTTCTTATTAGCCACAAAAGGACCCTCCACAAACTCTCTGTATGCCTGCATCGCACCAGGGGCTACGCCATAAAATAGGTTTGCTTCTGAAAGCTGGTCTGGCACTTTCAAAATGCCAAAATCATTCAGCCTGTCAGGAGTAGCTGGTGCTTCAGCTAACGACAGACACTCAGATATATTACAGTTGTCCTTCAGAAACTTTAGTGCGTAACTTTGAATAGGAGACTGAAGCTTCTCTTGTTCCAGAGGTTCGTTACACTGTTCTTTTTCTGCATTGATTCCAGCCAGCTTTGTTTCCCCAATCCCAATTGACTCCTCTGCTTGCTTCTCTTTACGCATTTCACCACTGGTAGCTCGTAAAGTCTCAGCTGAACACCAAAACTTCATGATACTCTTGGCTAGGATTCTAGCAATTGATTTCTGTTTCCTTTGAATGTTTGCTTCCTCAAATGTTGCTCGACCACTTAAGGCAATCCAGTGGCACATCTGGGAAGCTGCTGCACTTTTCCACAGGCGCTCCTGCATAAATTCATTTGCCATCCAAGCCATCTCCTCCAGGACAAATTCCCAGTGACTCTTTGGCTTCTTCTCCAAAGAAATATTGCAGAGAGATCGTTCACCAGCTTTCTTGATATTGACCTCTATTAATCGTGCCCTTCTAAGGATAGTATCTTCATGTTCCTTCTTGGCAACAGTAGAATCTTCGCATTCCTTCTTTTCCATCATTGGAATATTTTCACCAGTTTTATTAACATCATTGTCAGGGTTCATTAATGACACAGAACTAGGCACGTCCTTCATGAGCAAACCAGACGCCACGGTAACAGAATCCAACTTATCAGCAATATTAGAATCAGGAGAACATTTATTATTTTTTTTCAAATTAGAACATGCTTCCTTATCGACTTTGTCAAGACCAGAAGTAGCAAGATTCCCTGTATCCTTTTGTGCATCAACCATCTTGTTATGGACATCAACGTCATCTTTGGCATAAATGGTATTGCTGACTTCTGGTTGAACAGAATTAGAAACGCCATCAACAACTGTGGGCATGTCACCACCTTCTGGTTGACCATCTTTGTTTCCATCCTTGTCAGAAGGTATAGCATCACCTAAATCTTCATCAGACACCTTCCCTGATAAGTTCTCACTTTTTCCAGGATGTTCATCAACGGTCTTAGACACATCTGCACATGGTATATCCGCTTCATTTTCATTCAAACTGGCAATTTCTACCTCAGAGGGAGGAACAGAACTCTTGCTAACCATATCATCTGCATGAACAACCAAATTTTTATCTGAGCATCCATTACCTGCTTCTTCCGCAGCACATGCTTCTTCCAAGACTTCATTGCATGAAGATGGAAATGAAGAAGTTGCCATTAAAGCAGCTTCTTTTGGACTTGTGTCAGGGGATTCTGCAGAAGTAGTTGCAGTAACTACCAAACCATCTCCAATAAGCTGTGAATTACCATTCACACTGTTTGGTGAGATTTCCGGTGTTTCAACACCATCTTTGAAGTTTGTTGTTTCATGAGTTGCTGCTTGGTTTCCTTCATTAGTGTTGTCCATCTCCATCGCATCATGATCACCTAATGAAGCAACCTTTGATGTGTTGTTCCGATCTGGACTTGCTGGTTTTGAGTTGCCAATAGATGAGGCACCATGATCTTCTGATTTTGTTTCTTGTATTATCCCTTTTGCATCTTTCCCTTGAGAATATAGTGGGGAAACTGGTAGAGACCCAACAGACGCAGTGGCATTCTCCCTGCTTGATTTCGATCTGCGACGAGCATACGCCTGGTTCTTTGCCCCAGGGCGGAACAAACTAGAATCTTCAGCCTCTTTTACATTGTTTTGACCATCACAGCGCAGGGACACATCAGGTTGAGATACATTAGTTCGTTTAGTACCACATTTGACAAGTTTCTCCCCACCTGTGTTGCTGGTATCTCCATCCAAAAGCATAAGATTATCAGCTGTGTTGGCATCACGGCATGATGAACTTCCTGGCTTGCCACTACTTTCAACTGAATCCCCATGGGGTGAGGCAGCAAACGCAAAGCTGCCCTTAGCTTCACTTATCACATTTTGTTCGGTTATATGATCTGCAACAGAAGTGGACTGGACACTAAGTGATGCTACATGTCCAAGTTTGAAATCCAAGGGGTTACCTCCCTTCTCTAAAAATTCAAGCTCCCTTCTTCGTTCTTCACGGACATCATATTCTTGCCTAAGCTCCTCTTGAGCTTTCTCTATGGCCGCACGGCGTGGCGAAGCTTTCTGATCAATGTTCACACCACATTCTGCAATTCCTCCCATAGAGCACAGCTCAGTATCCACACAGGATCAGGATATGCAAAGGCATCACTGCAAGCATTATCTACTCAGCTTGCCATGTCATCACTCATCAATGGACATGACCTTCTCAAAAGTCCGCAAAATGTGCAACCTGTTTCCTAGGCAGCCCCCGCGCCGGGGGTGGGCTAGGGCTAGGGTTAGGGTTTGCGGGGAGCAGGGGAGCCCCCACCTCGGGGCCAGGGCAGTGGGCGCCGGGAGCACGCGGCGGGGAGGGGGGAGGCACGCGGGAGGATCTCCGGGTGGTGGCGGCGGAGACGGCGGCGGCGGCGGCCGGGGGGTCGCCGGAGATCGGTGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0400200.1 | 8 | 4528618 | A | G |
| Osa08LNT0400200.1 | 8 | 4523798 | T | G |
| Osa08LNT0400200.1 | 8 | 4524149 | G | T |
| Osa08LNT0400200.1 | 8 | 4524204 | G | A |
| Osa08LNT0400200.1 | 8 | 4524441 | A | C |
| Osa08LNT0400200.1 | 8 | 4526585 | C | A |
| Osa08LNT0400200.1 | 8 | 4527141 | C | T |
| Osa08LNT0400200.1 | 8 | 4528648 | A | C |
| Osa08LNT0400200.1 | 8 | 4529349 | G | A |
| Osa08LNT0400200.1 | 8 | 4529881 | G | A |
| Osa08LNT0400200.1 | 8 | 4529932 | A | G |
| Osa08LNT0400200.1 | 8 | 4529988 | G | A |
| Osa08LNT0400200.1 | 8 | 4531797 | T | C |
| Osa08LNT0400200.1 | 8 | 4532487 | G | A |
| Osa08LNT0400200.1 | 8 | 4532844 | T | C |
| Osa08LNT0400200.1 | 8 | 4532876 | G | A |
| Osa08LNT0400200.1 | 8 | 4533273 | G | A |
| Osa08LNT0400200.1 | 8 | 4533908 | C | G |
| Osa08LNT0400200.1 | 8 | 4534095 | A | C |
| Osa08LNT0400200.1 | 8 | 4535034 | G | A |
| Osa08LNT0400200.1 | 8 | 4535838 | C | T |
| Osa08LNT0400200.1 | 8 | 4536255 | C | T |
| Osa08LNT0400200.1 | 8 | 4537411 | T | C |
| Osa08LNT0400200.1 | 8 | 4537881 | T | C |
| Osa08LNT0400200.1 | 8 | 4537906 | A | G |
| Osa08LNT0400200.1 | 8 | 4537994 | A | C |
| Osa08LNT0400200.1 | 8 | 4538508 | T | C |
| Osa08LNT0400200.1 | 8 | 4526219 | A | G |
| Osa08LNT0400200.1 | 8 | 4530396 | G | A |
| Osa08LNT0400200.1 | 8 | 4530446 | A | G |
| Osa08LNT0400200.1 | 8 | 4531176 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0400200.1 | osa-miR5525 | Translation | 4.5 | 9.923 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR5532 | Cleavage | 5.0 | 15.341 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR5817 | Cleavage | 4.0 | 8.17 | 1 | 24 |
| Osa08LNT0400200.1 | osa-miR5830 | Cleavage | 5.0 | 16.983 | 1 | 24 |
| Osa08LNT0400200.1 | osa-miR396c-3p | Cleavage | 4.0 | 11.707 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR166k-5p | Cleavage | 4.5 | 17.018 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR166k-5p | Cleavage | 5.0 | 18.202 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR167h-3p | Translation | 4.0 | 13.487 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR169i-5p.2 | Cleavage | 4.0 | 11.553 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR172c | Cleavage | 4.0 | 9.923 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR419 | Translation | 3.5 | 10.284 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR419 | Translation | 5.0 | 16.127 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR443 | Translation | 4.0 | 23.547 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR444a-5p | Cleavage | 4.0 | 21.987 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR814a | Translation | 5.0 | 17.702 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR814b | Translation | 5.0 | 17.702 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR814c | Translation | 5.0 | 17.702 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR1426 | Cleavage | 5.0 | 9.923 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR810b.2 | Cleavage | 5.0 | 19.209 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR1438 | Cleavage | 4.5 | 22.46 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR1854-5p | Translation | 4.0 | 11.201 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR1860-5p | Translation | 5.0 | 12.341 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR1866-3p | Cleavage | 4.5 | 15.289 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR1319a | Translation | 5.0 | 23.082 | 1 | 24 |
| Osa08LNT0400200.1 | osa-miR827 | Translation | 4.5 | 23.163 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR2105 | Translation | 4.0 | 15.937 | 1 | 20 |
| Osa08LNT0400200.1 | osa-miR2872 | Translation | 4.5 | 15.038 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR5081 | Translation | 4.0 | 8.341 | 1 | 22 |
| Osa08LNT0400200.1 | osa-miR5490 | Translation | 4.0 | 21.477 | 1 | 21 |
| Osa08LNT0400200.1 | osa-miR167h-3p | Cleavage | 4.5 | 13.052 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0400200.1 | 8 | qRRE-8 | Resistance or Tolerance | Other soil stress tolerance | C166 | C1121 |
| Osa08LNT0400200.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0400200.1 | 8 | nan | Morphological trait | Panicle/flower | RG333 | RZ562 |
| Osa08LNT0400200.1 | 8 | nan | Physiological trait | Flowering | C166 | C1121 |
| Osa08LNT0400200.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0400200.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
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