© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0400500.1
TATATTATGAAACAGAGGACTGTGAAACAGAGCAAGTAGCTTGGTGGTAGTAGTAGTAGTTAATTAGCGATCGATCGAGCTACCGGAAGGCTGCACCGAACGGCGTCCAGAAATCGACCGGCGTCTCGCTGGCGACGGCGAAGGTGCTCGATATCGGGACCAGGCACAGCCCTCTTCCGGTGAGGTCTCTCTTGCTAGCCGCCGTCGCCTCGCCGCCGCCGCCGCCGCCATCGTTGTCGACGCCGGTGGAGTTCTTCAAGTGGGGCACTTGTTGCCTGTTCTTTAGGTAAGGAGCACTAAGTGCACCAACTTGATCGTGCAGGAACTTGATGTACTCGATTGTCTCGTGGAGCACCGATGCCGTGTCCGTCTTTCCAAAAGGGGAGACTAGTTGTTGGAGTGCTGTGACCCTGTCCCCTAGCTTCTCTTTCCTCACCTTGAAGGTCGTCGGCAATGGCGATGGCGTCCCGGTTCTGGATTTCTTTAGTGGCGTGGAATCAGCCTTCGCCTTCTTCGTGATGATTGAGCTGGAGTCTCCTACTCCTTCTAATGCCCTCTTAGCTGCAAGGCTCGCCGGCGTAGGCTGCGCCGGCGATGCTCCGGCACCACCTAGTGCTGTACCCTCCGCCGCGACGGTGAACCTGGAGGAAGGGTTCCAAAACGGCGCCGCCGTGCTGTTGGTGAACTGCAGTGGCTCTCTCCCGGCGGCGGCGGCCGGCGGCTGCAGGTTCATCGCCGGCTGATGATGATGATACTGCTGAAACCCCGGCGAGTCATTAGGCTTCGCTGCCGCCGCCGGCTCCGTGAGGCTTCTGAGCAGCGAGGAGCGGAAGCCGCCACCGCCGCCGTACGGCGAGGTCGGCGACGAGAGCAGCTCGAAGCCGAGGTTGGAGAGGAACTGGTAATTCTGGTCATGTTGGTGCTCTTGCAGCATCACGCCGTTATTTGATGATGAGTTGCTCATCAAACTCGGCGTGTTGATCTGATGATGATGATGATTGGTATGGTGATCATTTCTTGATGAGCTCATGTAGCCATGGAAACCACTCCCATCCAAGAAAGGCTGCTGATTCCAGCCGCCGCCGCCGCCGCCGGCCACCGTCTGCGCGTGCACGGCGATGGCGGCCGGGTCGGCGACGCCGCCGGCGGGCTCCTGGAAAGTGATGGAGCTTCCGGTGGCGAGCGATCCAGGCGACTCCGACGAAGCAGTGTTACCAGCAGCTGACCTCGACGTGTTGCCACCGCCGTCGACGGCCACCACCGCGGCCGACCAGCCGCCGAACCCTTGCATCGTCTCCGGCGCCGGCGCCGAGCACGACGACACCGCGGCGCTCCACCAGTCGCCGCCGCCGCCGCCGTGGCTCCCCGTCGTCGTCGTAGCACCACCCGCTGCCGCGCCGCCGCCGTACATGGCCGGCGCCGCCGCGGCGTGGATCATCTCCTGGTGATCTGCCATATATACGAGCTTAGCTTCGGTAATTAGCAATCAAGTGGCTAATACGATATGTATATATATCTGTCTATATATGTATATATATTGGATTGTTCTTGTTGATTTGGGTTTTTTTTCTCTCGCTAGAATTTCGAGCTAATAGCTAGCAATGGAAGAGCTAGAGGAGGTTGGGCTAGCTATGCAGGTAGCTAGTGGTGAGCAATTGAGTATCTATCCTAGTGCTCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0400500.1 | 8 | 4646986 | A | C |
| Osa08LNT0400500.1 | 8 | 4645707 | A | G |
| Osa08LNT0400500.1 | 8 | 4645721 | G | A |
| Osa08LNT0400500.1 | 8 | 4645748 | T | A |
| Osa08LNT0400500.1 | 8 | 4645870 | T | A |
| Osa08LNT0400500.1 | 8 | 4645886 | A | G |
| Osa08LNT0400500.1 | 8 | 4645926 | C | T |
| Osa08LNT0400500.1 | 8 | 4646003 | A | T |
| Osa08LNT0400500.1 | 8 | 4646796 | G | A |
| Osa08LNT0400500.1 | 8 | 4647320 | A | G |
| Osa08LNT0400500.1 | 8 | 4647712 | C | T |
| Osa08LNT0400500.1 | 8 | 4647857 | C | T |
| Osa08LNT0400500.1 | 8 | 4645739 | C | T |
| Osa08LNT0400500.1 | 8 | 4645779 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0400500.1 | osa-miR414 | Cleavage | 4.0 | 24.296 | 1 | 21 |
| Osa08LNT0400500.1 | osa-miR1857-3p | Cleavage | 4.5 | 18.59 | 1 | 21 |
| Osa08LNT0400500.1 | osa-miR2876-5p | Translation | 4.0 | 23.24 | 1 | 21 |
| Osa08LNT0400500.1 | osa-miR3981-3p | Cleavage | 4.5 | 18.729 | 1 | 21 |
| Osa08LNT0400500.1 | osa-miR5501 | Cleavage | 4.0 | 24.886 | 1 | 21 |
| Osa08LNT0400500.1 | osa-miR5488 | Translation | 4.5 | 22.623 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0400500.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0400500.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Osa08LNT0400500.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0400500.1 | 8 | qRRE-8 | Resistance or Tolerance | Other soil stress tolerance | C166 | C1121 |
| Osa08LNT0400500.1 | 8 | nan | Morphological trait | Panicle/flower | RG333 | RZ562 |
| Osa08LNT0400500.1 | 8 | nan | Physiological trait | Flowering | C166 | C1121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)