© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0400900.1
TTTAAACAGCATACTTAAAAACAATCTAGTCTGAACTTGACATGTGCAAACATATCAGCAAGATGAGTCATACATGCGACCAAAATGAACTGTTGTGTTAATACCAGAACGCCATGCCATACAAAAGAGTATGAAAAAAGGGGGAAAAATTCAAGAAGAGAGCATCTCCTTCATTTTCTGGAAATTAAGCTGATGATTTTGCTTCCATCCTTGATCGCCTTACATGTCCTTTCGATTTTGGAAGTTACCAGCCAGGTAGCCGACTGATATTGTCCAAAATCTGCTCTCTCCAGTAGTTTACATGTCTTGTCTACAGCCCCAGCCACGAAACAAATGAGGCAAGAGTACCAGCAGCTAGGCCGGCCTAAGTATTGTTTGGCCCAGATAGACATTTAGCATGGACAATAGGTCCCAACTGCGACCTTTCTAGACCACCAATATTTCCATCTGGTGCATTCATATAAACTGCACCTTTGTACATCCACTCTTCAGTTTCATCACTGTAGAAATCTTCAAATGGCTCTTGACATAAAGCACATGTTGTTTGGTCCTCATCAGCAGGAACAGCCAATTCTTTCTCTTCCTTTGCGTCTGCAACTGGTTCGGCAGGCTCAAAAGAAGGAACACCATCGTTTCCTACTGTTTCTGCTGCTCTTAACCATTCACCCACAGTGACAAAATATTTACGTGAAGTTTGCTTACGATTCTTTGAATTTCTGTTTTTCGTAACATGCCAATCCATGTGAGCACGATGTTCTTCTTGGCATTTAAAACGAAGGCCACAAGTTTTGCATTGCCTCGGAAGATCCTGATACAGAGCATTAATGACAGACTCGTTCCGTACCTTGAGGTCAACATTGAAGTCAACACCCACAGAATCCTGAGGTTGGCTGGGTGGTTGCAATGAGATTATACCATGCTGCATAAGGTTACTTAACAATCCAGAGACAAGTGGAGGGCCCCCAACTTGCGATGATGATGGACCTATCTGCGATGGAGGAGGTGGTCCTGAAGGTAACGATGGCAAAGGAAATCCAGGCATAGACTGCAAGCCATAGGGTGGTACTGCAGGTGGTACAGGGAAAGAACTTGGCAGGAGTGCAGCTGCGCTACCTCCTTGTCCATGGAATATATTTTGTGGAGGTGCAACAGACATACTGGGGGCAAAGCTTCTAATTGTCTCTTGAAGGTGAGAATGAGGATGGGGATGAAATTGCGGCGGGTGATGAGGTTGACCTTGGTTTCCCAAAACTGTGCCCTGATTTTGTTGACTCAATGACAACAAATCTGGATGCTGATATGATGGTTGAGCTAAATCATCAGCATTCATTGTTCTCCGATCCAAGGCATGATGCTGTGGAACAAAAACAGACGAACTGGACCCTTGGCTAATAAATGGTCTAGAATCTAGACCATCTGATGCGCCTCTAGGATGTTTGGTATCAGGTGGAATTGGTTGTATAGTTAGTGACTGTGTATTAAGAGGCCATTCCATTGGAGCATGAGCAGGTGAGGACCTTTGCTTCTCCAACAATGGAATATCTACATTCAGCGCATCATATGTACCACCAGTGGCCAACCTCTTGACTGGCACTTCACTATCAGTAGGCAGTGGCATTCTATTCAGAATTGATGCAGGCTGGGGCGCTTGTACCCGCAACGGCTGACCAATAGTCTGCTGCCAAGGTGGAACTGGCATGGTAGTTCTCCCAGGATCAAGAGTATGTTCAGAACTCTGGTAATCTAAAAAGGCACCATTCTGAACACCAAAATTGCCTGGATATCTCCTGTTATTAGTTCTGTCAACGGGCCCGTTAGTAGGAATTCTATCTTCGAGATTTAGTGGTGGCCCATCAATTGCTGGTCGAGGAGCCTGGCCTGGCCAACTGTGCCTCACAATATCAGATTCCAGTAGTCCACTGTTTGGCCCAAGAAATCCAGCTCTCAGGGTTCCAAGGGGAGGTAAAGAGGGCACGCTGGTTCTGTTTCGATCAGTTAAAGTAGGACTCATATCTTCCCAAGTATACTCTTCTTCCTCCGAAGTTAGCCATTTTTGTGCACTAGGTCTGCCTGCCATGCCATTTGAATCTAGACGTTGCATCTTGGGAAGCCTTTCATCGACATCTTTTCCTTGAGAATTTCCATAAGCATCAATAAGTTCCCTTGCACTTTGCTTTCTATATTCTTCATCAAGTATGCTCATCGAAGGCCGTTGTGCACCATCCTCAAAAGCCCACTTCCGTTCAAACCAACCATTTCGATCAGGCAATCTTCTGGGGTCAGGTCCTAGAACAGAATGCGATAGTGGTGGCCTCTCCAGAGCTCTCTTGGGGGATGCATTTCTAGGGAGCACATCAAGAGGTGGTGATCTTGACATGGTTCTTCTTGAATTGGCTAATGGTCCTTCTGTATTGAGTATGGAAGGATGTTTGCTTAAAAGATGTGGCGAACTTGGCCTTATCAACCCAGTATGTGAACAAAATGCCTCTTGTTGATCAAGATCGTCAGCATACAGCATAGTAGACTTCTGGAGCTTTGAATTAGTTGCAGGCCATCCTCGCGAACTTTTAGATGTTAAACCATTTATTTGATCCTCTTCCACATCATTCATTTGCCGATTTCCACGAGTTATTGGTTGATGCACCGAAGTTGACTGCTTAAATTGTTGTTGTGCTTCTAAATATTTTGGATTTACATGAATGGCATGAGACAGTCTAGGAGATATCGACTCTGACTGTCGGATATCAGTCGCTGTGGCAGAGCGCTTATTCTCTAAGGGGGAAAACTGAAGCTCATCCTCAATTCCGCGTAGCACAGAGGAAGGGAACACTTGTGACCAGGTACCAAAGAGGTGTCGCATTGCAGCATGCTGATTGCGGTGAACTTTCCTATAGGCATCACAAAATACCTTCTGCAACCTAGCGGCAAAATGCCCTACATATTCTCGTCCTATGTTCTTCACAATACTGTCTAGCAGATACAAAGATGGTAATTTCTGGTCGGCAGACACCTCCGCGATGCGGGCGCAGATGGCGTCGGCGATCCCCCTCGCGGCGAGGGCCGCGTGCTGCCCGGCGATGATGGTGAGCTCGGTGATGATGGGCTTGCAGTTGAACGTGAGCTCCGAGAGCACCTCCACGTACACCCGCACCACCGCCGCCGCCGCCACCTCCCCGCCTCCCCCCTCCTCCTCCTCCTGCTCCTCCCGCAGCCTCGCCCTGAACCTCTCCACCACGTGCCCCACCCCGCCCGCCCCCGCAACCGCCGCCGCCGCCGCCATGTGGGACGGAGGAGATCCCGCCTTCCCGCCTACTCCCGCCGCTCCCGCCGCCGATGGGGGACTCGCCGCGCCGGGCTAGGGTTTGGGGGCGCCGCGACGAGGCGGAGGCGGAGGCATATGCGTCGCGGAGGCGAAAGGGGGAAGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0400900.1 | 8 | 5119541 | C | T |
| Osa08LNT0400900.1 | 8 | 5120627 | T | C |
| Osa08LNT0400900.1 | 8 | 5119797 | A | G |
| Osa08LNT0400900.1 | 8 | 5119813 | C | T |
| Osa08LNT0400900.1 | 8 | 5119933 | T | C |
| Osa08LNT0400900.1 | 8 | 5119012 | A | G |
| Osa08LNT0400900.1 | 8 | 5119977 | G | A |
| Osa08LNT0400900.1 | 8 | 5120019 | T | C |
| Osa08LNT0400900.1 | 8 | 5120490 | C | A |
| Osa08LNT0400900.1 | 8 | 5121546 | T | C |
| Osa08LNT0400900.1 | 8 | 5121937 | T | C |
| Osa08LNT0400900.1 | 8 | 5122091 | A | G |
| Osa08LNT0400900.1 | 8 | 5122140 | T | C |
| Osa08LNT0400900.1 | 8 | 5123011 | G | A |
| Osa08LNT0400900.1 | 8 | 5123345 | G | A |
| Osa08LNT0400900.1 | 8 | 5123848 | C | T |
| Osa08LNT0400900.1 | 8 | 5124921 | G | T |
| Osa08LNT0400900.1 | 8 | 5125264 | G | C |
| Osa08LNT0400900.1 | 8 | 5125920 | A | T |
| Osa08LNT0400900.1 | 8 | 5126057 | C | T |
| Osa08LNT0400900.1 | 8 | 5126506 | T | C |
| Osa08LNT0400900.1 | 8 | 5127097 | T | G |
| Osa08LNT0400900.1 | 8 | 5127098 | C | T |
| Osa08LNT0400900.1 | 8 | 5124226 | A | G |
| Osa08LNT0400900.1 | 8 | 5124293 | T | A |
| Osa08LNT0400900.1 | 8 | 5124434 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0400900.1 | osa-miR5829 | Cleavage | 5.0 | 24.232 | 1 | 24 |
| Osa08LNT0400900.1 | osa-miR5834 | Cleavage | 4.0 | 14.171 | 1 | 21 |
| Osa08LNT0400900.1 | osa-miR166a-5p | Cleavage | 5.0 | 18.943 | 1 | 21 |
| Osa08LNT0400900.1 | osa-miR166c-5p | Cleavage | 5.0 | 18.943 | 1 | 20 |
| Osa08LNT0400900.1 | osa-miR166e-5p | Cleavage | 5.0 | 18.943 | 1 | 21 |
| Osa08LNT0400900.1 | osa-miR166l-5p | Translation | 4.5 | 19.995 | 1 | 21 |
| Osa08LNT0400900.1 | osa-miR414 | Cleavage | 3.5 | 18.467 | 1 | 21 |
| Osa08LNT0400900.1 | osa-miR419 | Cleavage | 4.0 | 16.252 | 1 | 21 |
| Osa08LNT0400900.1 | osa-miR419 | Cleavage | 3.0 | 19.731 | 1 | 21 |
| Osa08LNT0400900.1 | osa-miR396e-3p | Cleavage | 5.0 | 23.812 | 1 | 24 |
| Osa08LNT0400900.1 | osa-miR1860-3p | Translation | 4.5 | 19.204 | 1 | 22 |
| Osa08LNT0400900.1 | osa-miR2931 | Cleavage | 4.5 | 13.436 | 1 | 20 |
| Osa08LNT0400900.1 | osa-miR2931 | Translation | 5.0 | 17.905 | 1 | 20 |
| Osa08LNT0400900.1 | osa-miR169r-3p | Cleavage | 4.5 | 22.907 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0400900.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0400900.1 | 8 | nan | Morphological trait | Panicle/flower | RG333 | RZ562 |
| Osa08LNT0400900.1 | 8 | nan | Physiological trait | Flowering | C166 | C1121 |
| Osa08LNT0400900.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0400900.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Osa08LNT0400900.1 | 8 | qRRE-8 | Resistance or Tolerance | Other soil stress tolerance | C166 | C1121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)