© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0036700.1
CATTAACATCAATAATTATGATACTAACTGAGGATAGTTCTTCAGTATCTTCACAGGTACTTGTGTAACTATATCATATCATCGTAACTACGTGTAGAGCTGGTATCTGGTACTTTAAACTGCACAAAACTACGTGTAGAGCTGGTATCTGGTACTTTAAACTGCACAAAATGGAATCGTGTAGTGATCTTAATTTATGTACTCTCATGTTAGTCTACCATCAAGGACAGCTGAAGCCTTGGACACAGCCCTTGCAGCCCTGTAAATTTCATGCTGCAGGAGCTGCCAAGATTCGGTTGTGTTGAGCTTATTTGCCTTGTCGATGGCCGACACGATACCAGGGAATGCCTTGGTGCCCCAGTCGTCTTGGTCAGACGATGCGTATATCATATGTTTGTACCACGGCCTACCGTCGAGCCCTTCCCGGTTGATGAAGCCTCGCTCCGCCATCATTAACCGGTCGTTGATATCTCTGACTTTTACTGTGTACGCTCTCGTTTTTAGGCTCCAGTTTTCTGCTTGTAGCATCATCTTTTCTTTGTGAATTTTGTTGGCTGCTTTTCTAAGCTGGTCAATTGACTTGTGTAAAGGAGCGAAACTGACAGGACATCCTGTACACCCACCTTCCACAAGTTTTGTGCATTTCTCCAGTTCTGATGCGTAAGAGACATAATTGAGGGGTAAGATCTCATCATCTGCAAGCCTCAAAGCAATCAGACCCCATACACTTGCCAATGCAACATGTCTGTGAAACAACGGATCTCCGAATCTCTCCATCCAAACATAATCATCGTACAGTGAGTGGTAAACAGGGTAATCTTCCATTGTTCCGTAAGACATGTCAAGTGAAGGTACTCCAATATATTGTAGAAAAGCTGCAAAATCTGTTCCTGCTCCAGCCACTCTATCAATCGGAGGATGGTGGCGAATCATAGTGTCATACAATGTCTGCGATGGATCATCAGGATCTTGCACCATTTTACTTGCTTCTTTGATCAACTGATCAAGTTGAGGGGTTGCCCGGGGCCTAAAACCTCCAGGGCCAAACACTGTTATATCCACATTCAAATAAGCAATAGCTCTTGAAGCCAGCATATCCATGTTGTCCTCGACCCATTCAGTAGACCCTATCAGAGCAAACTCTTCTGCATCCCAACTACACACAATGATTGTTCGTCTAGGCCTCCATCCCTTCTTCTCAAGCTTGGACAGCCTTTCTGCGATCTCGAGCATAGCTGCTGTTCCACTGTTGGGATCAACTGCTCCGAATGTCCAGGCATCACGATGGTTCCCTATGATCACATATCTATCAGGCTCTTCTTTTCCCTCGATCACGGCAAAGACATTTTCGATGGTTGCTAAGGTGTCATTTCCAATGTACGTGAGATTCAGCACAGCAGGACCGGGTCCGAGGCGGTACATGGGCGCGCCCTCGCCGCCCTGCCACTCCGTCGGCGCCGCGTCGCCGCCCATCGCCTTGAGGATCGTCTCCCCGTCCCTCGCCGACACCGGCAGCGCTGGGATGCTGGGCATCGCGGCGCTCCCGTCGAGCTCCCCCTGGCTCAGCCGCTCGCAGTCCTCCCCGGCTGCGCAGGACGGCCACAGCGGCGTGGTCGGGTCGCCGTTCCCGTAGTACAGGGTCCCCACCTGCACGCCGGTCGGCGGCAGCCAGCGCGCGTCGGGGAACCACTTCCGCTTCCCCTTCGCTCCTGCGCCGCCAAAGTCCTTGGCGTCGGTGTAGACGATCGCGGCGGCGGCGCCCGCGGCACGGGCGTTCCGCACCATGTCCTCGCAGTGCAGGTTTCCGTAGCGCACGAGCGCGACCTTCCCGGCGACGTCCACGCCGCGGGAGGCGAGGTACTCGTAGTCCTTGGTGTTGCCGTAGTTGGCGTACACGACCTCGGCGGCGACGGAGCCGGAGGCGGAGTAGGCGAAGTACGTGGGGATGACCTCCGCCGCCGCCTCGGAGTAGGGGTCCCCGGGGTAGGTCTCCTGGACCAGAGCGAAATTGAAGGCGGCCGCGCGGCCAGGCACGGAGAGGGAGAGGGAGCGGTGGATGGGGTAGGAGAGCAGCACGGAGTAGGGCGTGACGCGGGTGGGGAATGAGAAGGAGGAGAGCGCGGCGCGGACGTACTCGGCGGCGACGGCGTTGGCCTCCGTCCCGGCGACGTGGGGCCGGAGGGTGAGCGCGCGGAGGTGCGCGGCGGCGGTGTCGTTGTTGCCGAGTGAGAGGAAGAGCGCGTGGTAGCGCGACGCGGGGGCCGGCGCGAGGTGGTGGTAGGAGGCGACCAGGGCCACGGAGATGGCCAGGAAGGCGACGAACCTGCGCCTCCTCGTGGCCGCATCACCGCGCCCGCCGTCGCCGCCTCCCATGGGCGCAGCATCGGGGAGGATCAGCGGCTGCCGCTGCTGTGGCTTGCCGTGGCGAGACATGGGTGATGGGCGCAGTGGCTTGGGTGGAGTTTGGAGAGGCGTCGTAGTTTGCGGTTGCAAGCAACGTCACTTTGTCAGCGCCAAGAGCCCAAGAGGTTGTATCGTCTCGATTTAATTGGGTCGTTCGCATCGCACCGCAGCGCGCGGTGCTCGCACACGTTGCAACTTGCAAGTTGCCGCGCAATGCTTCGTTCGGCTTCAATAATTAAACGCTTATAATAAGTGTGGAAAAATATCAAGGCTGATTATGAGCGTCAGCCATCAGCTCACTTTTGTTGATGCCCACGAGTTTTTCCTCTAAAAAATATTAGCTCGTGAGCAACGTTCCAACTCCGCGAGCGAAAAGTAGTACTTGTCTCTCTAATAAACGAAGTTACGGATTGTCTCTCTAATAAACGAAGTTACGGATTATGACACGTTGAAATGCAAACCATGTTTTTAATATACTCCCTCTGTTTTTTAATAGATGGCGCCGTTGACTTTTGAATATATGTTTGACCATTTGTTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0036700.1 | 1 | 30933825 | A | G |
| Osa01LNT0036700.1 | 1 | 30934347 | G | A |
| Osa01LNT0036700.1 | 1 | 30935036 | A | G |
| Osa01LNT0036700.1 | 1 | 30935181 | T | C |
| Osa01LNT0036700.1 | 1 | 30935706 | T | C |
| Osa01LNT0036700.1 | 1 | 30937824 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0036700.1 | osa-miR5799 | Translation | 3.5 | 15.379 | 1 | 24 |
| Osa01LNT0036700.1 | osa-miR5830 | Cleavage | 5.0 | 13.625 | 1 | 24 |
| Osa01LNT0036700.1 | osa-miR5830 | Translation | 4.5 | 18.156 | 1 | 24 |
| Osa01LNT0036700.1 | osa-miR6248 | Cleavage | 5.0 | 16.506 | 1 | 21 |
| Osa01LNT0036700.1 | osa-miR6248 | Translation | 4.5 | 14.806 | 1 | 21 |
| Osa01LNT0036700.1 | osa-miR7692-3p | Cleavage | 5.0 | 13.737 | 1 | 24 |
| Osa01LNT0036700.1 | osa-miR166k-5p | Translation | 4.5 | 13.711 | 1 | 21 |
| Osa01LNT0036700.1 | osa-miR535-5p | Cleavage | 4.5 | 13.605 | 1 | 21 |
| Osa01LNT0036700.1 | osa-miR2103 | Cleavage | 3.5 | 17.544 | 1 | 22 |
| Osa01LNT0036700.1 | osa-miR2868 | Cleavage | 4.0 | 23.395 | 1 | 20 |
| Osa01LNT0036700.1 | osa-miR2868 | Cleavage | 5.0 | 20.131 | 1 | 20 |
| Osa01LNT0036700.1 | osa-miR5077 | Translation | 4.5 | 19.794 | 1 | 19 |
| Osa01LNT0036700.1 | osa-miR5147 | Cleavage | 5.0 | 15.572 | 1 | 21 |
| Osa01LNT0036700.1 | osa-miR5157a-3p | Translation | 5.0 | 19.507 | 1 | 24 |
| Osa01LNT0036700.1 | osa-miR5157b-3p | Translation | 5.0 | 19.507 | 1 | 24 |
| Osa01LNT0036700.1 | osa-miR5509 | Translation | 4.5 | 15.897 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0036700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0036700.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0036700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0036700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0036700.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0036700.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0036700.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)