© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0401200.1
TTTCAACCAGTCGATGCTAGGTCAAAATCGAATGGCATATGACATCCATCTGGGTAACAAGCTGTGCAGAATACATAACAGCAAAGCAATGATAATTTTAAGGCAGAAAACAAACCACGAAAGATTTTTTTACTACATGCAGTTCACATGTACGACAGAATCACAATGTGCACCAGCCCAGGCTCACAGAAGTACAGAACATGTCGCTTAATCAAAACACCTCATAAGCAGTCAAAATCTGGAGAACTACAAATCACAATCTCTATTGACATAACCCAGACATGCTCCGGAATGCAGAAGCATCACCTCGTTCGACGGCTTTGATCAGTCTCGAAAACCAAATCTTCCATTGGATCTCACTGTTGCTGCTGCGGCTGCTGAGCTAGGGGTTGTTGGTAGTTGGGATAACCAGCATAAGCTCCATACCCGTACATATTAGGGTCCTGAGGTTGAGCATACCCATAACCCTCATATCCTTGCCCATAACCGTAGTATCCAGCATTAGCACCACCCCACTGGTTGGAATCCTGTTGAGGCTGAGCTTGTCTATTTGAAGGGCTGCGGCCCCATGAAAGCCTCACATTCTGTCCTCCAATCAAGGTACCTTGTAGAAGTACCAAAGCTTCATCTGCAGAAGCTCTGTTAGCAAATTGAACAAAACCACATCTTTTTCCAACTGGGATCTTAACATGGACCACATCTCCATAGGGAGTGAAAACTTGTTTCAACATATCGTCAGTGACACTGGGATCAAGGCCACCAACAAATATAGTGGTATTGCTAGGATCACTGTCAGACTGAACTCCTTGAGCACTCGGTACTAACAGAGGCCACGAATTACAAGACATGCATTGCAGCTCAAGTCAATTCCAAGGCTCCTATATGAAGAGAGCCTGTTGGTATCCTTTCTCTTGAACTCCAGTTGCTTTCTTATTTGCAGCTGGGCCGATACGCATAGGTCTTGAAGAACAAACCATCCCATTCATTTCTGTCATTGCACGGGCTTGCTCGGAAGGATCACCAAATTTGACGAAGCCATAGCCCTTTGAACGCATTGTCATTTTATCTGTCACAACCTTTGCACCCTTCACAGATGGGTAATGTACCCTGAACGTCTCTTGCAATATGTAGTCTGTAACATCAGCAGCCAAATCACCAACAAAAATTGTGTAATCAGGGGTATCATCACGTTTTTCACCAGCAGAGGCCCAATTCAACCGGTATGTCTGCTCAACATTTGGCATCATTGCCCCATTGTATGTTTGAAGAACTCTTTCAGCACCAGCATGGGATGTGAATTCAATAAAGCCATAACCCTGAAGTTGTCCAGTCTGCTTGTCACGAATTAGCTTCACAGATTGTAGCTCGCCGGTGGGCGCAAAGCAGGCGGAGATGTAGTTCTCATCCATCCAGTACTGGAGATCCCCGATCCAGAGCGTCCTGACCTCGTTGGGCCCCGCGGGGACGGCCGGGGCCGCCTGCGGCGGCGCCCCGTAGTACCCCGCCTGGGCCGGCGGCGGCTGGCCGTACGCGGGCTGCGGCGGCGGGGGAGCCTGGCCCCACATCTGCGGCGGCGGCGGGGGAGCCTGGCCCCACATCTGCGGCGGCGGCGGCGCGTACTGCTGCTGTTGGTGCGGCACCGGGGGAGGGATGGCGCCCCACTGCGGCGGCGCGCCGCCGCCCCCGGCGACCCCCGCCTGCGGGGGCGGCGGCGGCGGGGCCATCCCTGGCTGCGGCTGCGGCATCATGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGGGGATGGGGGGTGGCGCCGCGCGACGCGAACCCTAGGCGGCGAGGAGGAGGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0401200.1 | 8 | 5268051 | G | A |
| Osa08LNT0401200.1 | 8 | 5269934 | C | T |
| Osa08LNT0401200.1 | 8 | 5268308 | A | G |
| Osa08LNT0401200.1 | 8 | 5271104 | C | A |
| Osa08LNT0401200.1 | 8 | 5268078 | G | C |
| Osa08LNT0401200.1 | 8 | 5268323 | T | C |
| Osa08LNT0401200.1 | 8 | 5268489 | T | G |
| Osa08LNT0401200.1 | 8 | 5268511 | A | G |
| Osa08LNT0401200.1 | 8 | 5270109 | A | C |
| Osa08LNT0401200.1 | 8 | 5270355 | C | T |
| Osa08LNT0401200.1 | 8 | 5269070 | A | G |
| Osa08LNT0401200.1 | 8 | 5270886 | T | A |
| Osa08LNT0401200.1 | 8 | 5271379 | G | A |
| Osa08LNT0401200.1 | 8 | 5271716 | A | G |
| Osa08LNT0401200.1 | 8 | 5272350 | T | G |
| Osa08LNT0401200.1 | 8 | 5272833 | A | C |
| Osa08LNT0401200.1 | 8 | 5271162 | G | A |
| Osa08LNT0401200.1 | 8 | 5270741 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0401200.1 | osa-miR159c | Translation | 4.5 | 20.21 | 1 | 21 |
| Osa08LNT0401200.1 | osa-miR159d | Translation | 4.5 | 20.21 | 1 | 21 |
| Osa08LNT0401200.1 | osa-miR166k-5p | Translation | 3.5 | 9.833 | 1 | 21 |
| Osa08LNT0401200.1 | osa-miR1430 | Cleavage | 4.0 | 19.102 | 1 | 21 |
| Osa08LNT0401200.1 | osa-miR2090 | Translation | 4.5 | 11.728 | 1 | 22 |
| Osa08LNT0401200.1 | osa-miR5500 | Cleavage | 4.5 | 20.101 | 1 | 22 |
| Osa08LNT0401200.1 | osa-miR166k-5p | Cleavage | 5.0 | 17.328 | 1 | 21 |
| Osa08LNT0401200.1 | osa-miR3980a-3p | Cleavage | 5.0 | 17.539 | 1 | 21 |
| Osa08LNT0401200.1 | osa-miR3980b-3p | Cleavage | 5.0 | 17.539 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0401200.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0401200.1 | 8 | nan | Morphological trait | Panicle/flower | RG333 | RZ562 |
| Osa08LNT0401200.1 | 8 | nan | Physiological trait | Flowering | C166 | C1121 |
| Osa08LNT0401200.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0401200.1 | 8 | qRRE-8 | Resistance or Tolerance | Other soil stress tolerance | C166 | C1121 |
| Osa08LNT0401200.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)