© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0401300.1
TCATCTCCACAAATCTCATACTGTCCTAGAGCCTAGAAATGTGCTTCACAAGTGCAATCACGACACTTCAATCATAGAGCAAAGTATTGGTATTCTGCTCCCTATCTAATATTAAAATCTTTATCTACATCTATATCTATAACTATATAATATGACTATGTCAAGATCTAATCTTCAGTTTGTGTTTATCATATTACACATTTCTCTCACCTAAAATTAGCTGCTTTGCATTGAAATCAGTAAAGTTTTCTAAAAGAGGAGTGTATTTAAGCAAGGCCTTTGTACAATTGTTGGTCGAGTATATACAACTCTTTTAACTTCCTACTAAAAATGTGCCAATCTGCTAAGTCAGCCCAACAGTTTAGGTGTCCTTTGCCTGCTCAATCGGATTTTGGCTAGCCTCCAACGTGAGACACGTCTATAATTTAGCATTTAGCTTCCTCTTCACTATCTTCCTTTTTCGGAAGACCTTATTCACTATTGACCTCGCTGTAGCCCTTAACTGTATCACGCAAGAATTTGGCTTCCTTGTTGTTTTCAAAGTGCTCACGGACAGGTTTCAATATTTGGTTTATTGCTTCTTTCAGAGCAGGCTTTACATCAGCAGGATGCAAGGAACCACTCTCATAGTCCATGACTAGTTCTTCCACGCTCATAAATGTCTTGTTTCCACCATTTTTAGCCTTCCGGACCACCTCAAATTTGCCAAACCAAGGAAAAATGATGTATTTTATGTACTCAATACATGGATTTCCCTTGACAATCTTTGGAGGGCAGAAAGCCTGTTTTATCTTTAAATCTATCTCAGCCTTCTCATCATCCATGAAGATGGCTGATGCTGGATCACTAGCAGACATCTTGTTCTGCCCTTTCAAGCCAGGGAGCAAGTAGTGTGACAGAATAATTGGCTTCTTTTCCTGTCTGTTATCAGAATACGTTGTTGCTAGCTTGTTGACCTCATGCTGATCCATGCCCATCTGACAAATGTCTGCCTCTAGGAAGAATATGCCAGCACACTGCATGCAAGGGTTGAAGAACTGGGCAGTAGGCTTTTTGCATTCCCTGAGCTCCCTCACAACTCCAATCTTGCGGTGTGTGCTAATACCCATGACACGTGGCCAATATTCATCTGCCCGACTATTGATCTCAGCCGATGAACAAAGAAATTCTACCCCATCATGGTTCATACCAATGGATTTCCAGACCTCTATCATGTAGCGGCCAACAGTCTGGATTTTTTCCATGTCACCTCCCAGCTTGTTGTTCAGGAAGGCAGACCAATCATCTATCCAGATTTTTACTCTGCATCCAGCTTCTACCATTTTTCTCACATGTATTGCTTTCAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0401300.1 | 8 | 5379349 | C | T |
| Osa08LNT0401300.1 | 8 | 5381072 | C | T |
| Osa08LNT0401300.1 | 8 | 5381834 | G | A |
| Osa08LNT0401300.1 | 8 | 5382246 | T | A |
| Osa08LNT0401300.1 | 8 | 5382318 | G | T |
| Osa08LNT0401300.1 | 8 | 5382340 | T | G |
| Osa08LNT0401300.1 | 8 | 5382453 | T | C |
| Osa08LNT0401300.1 | 8 | 5382848 | A | G |
| Osa08LNT0401300.1 | 8 | 5382884 | T | A |
| Osa08LNT0401300.1 | 8 | 5383030 | A | T |
| Osa08LNT0401300.1 | 8 | 5383122 | C | T |
| Osa08LNT0401300.1 | 8 | 5380009 | G | A |
| Osa08LNT0401300.1 | 8 | 5379932 | A | G |
| Osa08LNT0401300.1 | 8 | 5381616 | T | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa08LNT0401300.1 | DTM_#DNAt_MULE_japo_Os1560 | Chr8 | - | 5379788 | 5380141 | 353 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0401300.1 | osa-miR5535 | Translation | 4.0 | 22.351 | 1 | 22 |
| Osa08LNT0401300.1 | osa-miR408-3p | Translation | 5.0 | 19.827 | 1 | 21 |
| Osa08LNT0401300.1 | osa-miR1430 | Cleavage | 5.0 | 17.961 | 1 | 21 |
| Osa08LNT0401300.1 | osa-miR1440a | Translation | 5.0 | 15.83 | 1 | 20 |
| Osa08LNT0401300.1 | osa-miR3981-3p | Translation | 4.5 | 20.003 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0401300.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Osa08LNT0401300.1 | 8 | nan | Morphological trait | Panicle/flower | RG333 | RZ562 |
| Osa08LNT0401300.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0401300.1 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)