© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0402200.3
ATAGAATATATCGGTTTACAACCAGATGCGAATTGCTCAAAATTGCATAGCATGGACTAGTCCAAGACAACAGTTTACCAACAAGACCACATATTCTGCATTTCAGAAGAAAACCGTTGAAATTTATCCTCAAGAATACAGAACATGCGAATGCCACTCATCTACACAAGGGTGAAAAAATCATTGACTATTTGCTACAAAAATTCAGAATCTCGTATCCTCTATTTACAAAGGAGACTCCAACTATTACGTTGCACCAGTGGCAACTGCATGCCCTAACCATCTAAAAAAACTGCACGCCCTAGTCAATGTACTCATGTTGTCAATTGTAACTCTTGCTTGAGTACAAGTTTGTACCCAGTGTTGCTATGACCAAAATTGCCTACAATACACAGTTGATAACAAACCAAATCTGAGAACATGCCAAAGGCTCCTGCCAACGATGAGATTAAGAAATTTGAGCCAAAAAAACATTGAGCAATGGAACCTATCTGGAAAATGTAGGGCCTGTTTGGTAGGCCATGGCTCTAAAATCTGAATTGAAGTGGAAGTTCAAAGGAGATGACAGCTAAGTGAGTTTTACTAAAATAATTAACTTCTAAAGTTAAATATTAGCGTAGTCCTTATATCCAGCGGAAACAATCGCAAGCAATATGCAGAACACCAGAAATTCTGTCTGCATATTGTGATTGAAGAGGTTGGCAAAGATTATACACAAACGATTATAGCTATGAAAAACCCATCATAGGACATGGGGTATTTGAAAAGAAAATGAAGCTTTGGTTCTGAAACAGAACAGTTAGAAAAAGGAACTATCCCCCCACACTAACAATGGAAGGAAACAGCCATCACTGCAGAAAGGACATAATCATGAGAAGGAATCAGTCATCACTCCTGAAAGGACACAATATAGAACTAATCGACTGGGAATATTTGAGCATGCCAAACAAGGCGACCAAATTCTTGTGATTGAAGAATTTGGCAAAGAGCATATACACATGATCAATGGTAAGAAAAATCCACCATAGGGACATACTGCATTTGAAAAGAAAGGAAGCTTTGGCTCTGCAGCAGAGTAGTTAGAAAGAAGAGTTCTTCCCCTGTGGTAACAACTGAATGAATCAGCTATCACTGCTGAAAGGACACAATCATAAGTTAAACCACGATGAGATTGAACTAACCATTTGAGAATCATTTGAGATTAACCGGGTATATTTGAACATGCCAAATAAGATGGACAAGGCAACACAAATAGGTCAAGGTTGAGAACCTAAGGAACATAGAATGCTAGGTTCACCCTGGGAACACACTTGGATAAGCATGAGATTCATCGAAACTTGTGTGGACGGGTATTTGATGCTCTTTCCTGGACCCAAGGAAATTATGGGATGGCACGAGAAGTTGAAAGGAACAGATTGAAGTGTCCAGCTATATTGAAAACTATAACAGGAACCTTAAGTAGACATAATGAAAGCTTTGATCAAATTCTCTGCCGATTGCTTCTGTTCAGTGGTGCCAGATATGCGAGCAACATGGCCATGACGAGACGATTTTGATTCAATAATTTCAATGTGAGCTCCAGAAATCTGCAATGGTACTTTATAATGTTGTCCAGGTTTGTGCCATGTTTCCCCATTACTTTTGACAGGCCACTAGCAGGAATAGTCATTTCCATATGTGGAGGACGTCCTCCATATCCCTTTGATGCATATGACGAGACTGCTGAATAGCCATCATCTATAGCCTGCAAGGAGCTGTACCCATACAAACTGCTATGCGGATATACTTCCAAACCACGTTCTATGTCACCCCTATGATCATAGCCCAGGGGAGTGATCTGTTGTCTGTAAGGTAATAATGCAGGCAAAGGATAACTGCTTGCATACAAAGGATCAGTAGTGGCAACAGTTAGCTTCCCATCTTTCTCAGAATTTTGCCTGTCCACACTGTCCCTCAAAACATCATCCCTGAGTCTTAAAACTATCTGTACAAGAGCATCACGCAGATTTTCCACTTCTCCAAACACCTCGACAAGCTCATCACTGGAAGATGCCTTCCGTGGTTTTTCACCCTTTGATATGTAGATAGCTGCCTTAGTCTTACTCCGCATGTCATTGACAATCGAACCGCCCTTGCCAATAAGACAGCCTATTACCTTACCTGGAACAAGAAGGCGAAGATTCATTTTACCTTCATTGTCATCATTGATCTTCGATTGCAGAAGCAGAACAGCTTCCACTGCTGCAGACTTAGCATCATCGGTGGCCTCATTGGATGTAATGGTGATTATACTTTCCTCTCGGTCATTTTTTGAGTCATCAACATCTATCCTTGCACCACTCTCTTTCCTTATACTCTTTATGGTCACCCCACCTTTACCAATAACCAACCCAATCTTGCCAGCAGGGCATAAAACACGCAATACTAGCTCCCCAGAACATTTCGGTGTATTATAAGCAGGAATTACAGGAAGCACAGATTGGTAAATGGGCAGTCGACTATGAGCATCAGCCGATACTGTAAGTTCAGGAACATGAGGTGTTGACCCTAAGATTGATAGACTTGGATGTCCAGAAGATATGGCAGCATCAGAGGGTGAGTAGAAGTTACTAGATGGGTAAACAGGAAGCTCAGAAGGAACTATAATGCTTGGAGGAAGGTCTGAAACAGAAGTTTCAAGAGGAATGGTCTCTTTTGATGGGCACTTGTAAATGATGGTTGATACTGCAAATAGTGCCTTTCTGACAGCTCTAGCATCACCGGTTATCTGAACAAAATTATCAAAGCTCATAGCACATGAATGTGTAACTTCATTTGGATCTTTTGGGCTCACTTTAATAAATGCTTTCGAAGTTGACCGAAGCCTCTTGATGACAGCACCAGACTTTCCTATGACACTTGCAGATTGACTAGCTGGTACAAGGATATTTGCTTCTTCATCATCAGAGTCCCTAGTGATGGACAGAGCATCAACAATTGCATCATGTACCTTGAGTAATGCATCTTGTGCTGTGCAAACAGGCTCCCTGTCATCGTCGTCATTAACATCTAGGTTTCTATGCTTGACAAAACAATATACCAAAATAACCCTCTTGTCTGCACCAGGGTGAGGGTCGACAACCTTGACTTTAGCACTCGTCTGTTGTCGGATAGAGTTTATCACCTTGCCGTTCTTGCCAATTACATTACCTATTACTCTGTCCGGACAGAGTATGCGGTAAACAACCAATTCATCATTACCAGAGTTTTCCTGGGCACGTGGCACTGGCCTCCTCTTTTGGTCCCTCCTTTCTTCTCTGTCATGGTCCCTGTGTTGCTGAGGGCGTTTGCCAGTATGCCTCATTTCGTTAACTGCAAAAGAGGATGCAGGATAAAAATCATATTTTTAATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0402200.3 | 8 | 5811722 | G | A |
| Osa08LNT0402200.3 | 8 | 5813580 | T | C |
| Osa08LNT0402200.3 | 8 | 5811644 | T | C |
| Osa08LNT0402200.3 | 8 | 5811574 | T | A |
| Osa08LNT0402200.3 | 8 | 5812284 | C | A |
| Osa08LNT0402200.3 | 8 | 5813770 | A | G |
| Osa08LNT0402200.3 | 8 | 5814209 | T | C |
| Osa08LNT0402200.3 | 8 | 5814787 | A | T |
| Osa08LNT0402200.3 | 8 | 5814207 | C | T |
| Osa08LNT0402200.3 | 8 | 5812467 | T | C |
| Osa08LNT0402200.3 | 8 | 5813919 | A | G |
| Osa08LNT0402200.3 | 8 | 5810114 | C | T |
| Osa08LNT0402200.3 | 8 | 5811083 | G | A |
| Osa08LNT0402200.3 | 8 | 5811281 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0402200.3 | osa-miR812q | Cleavage | 4.0 | 19.481 | 1 | 24 |
| Osa08LNT0402200.3 | osa-miR5820 | Translation | 4.5 | 14.915 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR1440b | Cleavage | 4.5 | 13.591 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR6255 | Cleavage | 3.5 | 16.326 | 1 | 22 |
| Osa08LNT0402200.3 | osa-miR395b | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395d | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395e | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395g | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395h | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395i | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395j | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395k | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395l | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395s | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR398b | Cleavage | 4.5 | 14.688 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR164d | Translation | 5.0 | 11.238 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR167d-3p | Cleavage | 4.0 | 14.405 | 1 | 22 |
| Osa08LNT0402200.3 | osa-miR426 | Translation | 4.0 | 13.939 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395m | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395n | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395p | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395q | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR395r | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR1432-3p | Cleavage | 4.5 | 11.244 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR169r-3p | Translation | 4.0 | 15.229 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR1846a-5p | Cleavage | 4.0 | 18.113 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR1846b-5p | Cleavage | 4.0 | 18.113 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR1846c-5p | Cleavage | 4.0 | 18.113 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR1846e | Cleavage | 5.0 | 17.979 | 1 | 20 |
| Osa08LNT0402200.3 | osa-miR2099-5p | Cleavage | 3.5 | 17.466 | 1 | 22 |
| Osa08LNT0402200.3 | osa-miR2867-5p | Cleavage | 4.5 | 16.094 | 1 | 22 |
| Osa08LNT0402200.3 | osa-miR395y | Cleavage | 4.5 | 9.467 | 1 | 21 |
| Osa08LNT0402200.3 | osa-miR5150-3p | Translation | 4.0 | 11.166 | 1 | 24 |
| Osa08LNT0402200.3 | osa-miR5503 | Cleavage | 4.0 | 18.756 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0402200.3 | 8 | hd8 | Physiological trait | Flowering | RZ562 | RG978 |
| Osa08LNT0402200.3 | 8 | nfb8 | Morphological trait | Panicle/flower | RG108 | RZ562 |
| Osa08LNT0402200.3 | 8 | nfb8 | Morphological trait | Seed | RG108 | RZ562 |
| Osa08LNT0402200.3 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0402200.3 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Osa08LNT0402200.3 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)