© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0402300.1
GGGCCTCTAAACTTCTTCCCCCGAATTTGGGCCTTTTCTTTCTACATGGGCTGCCCATTTCACCAAGACAGGCCGATCCCCGGCAAGATTTCCAGCCCATCATTTAATTTGTTTCCATGCTTACTCGAATAGCCTCTCAACTCTCAATTGTGTCCCGTCCCGCGATTGATTTGCATTTGATTCGGCTTCGGTTCTTTTTTGCCCCTGATTCATATATATATGACTATGCATAAGCAGGTGCGGCGCCAGCCTCAATCCAATCTGTCCGTTTTTTGAAGAAAAAAAAATCAACTCGAGGTCACCACGGATCGTTGTCCAGTATGTTCTTTTGTTGTTAATACTAGTAAACAATCTATGTCCAGCATGTTGCCCATGTATGCAATGGCCAGCTTCTTATTGCAGTGAATTTCTATAACTAATTGTGCATCCAGGACTTTACTTAATTTGTTACCAGAGATGCACGAACAATTACGAGCAGTGACTCCCTCCAGTTCTATAATTCTTGACATTTTAAACAATATTATCCAAAATGTCAAGAGTTGTGAAATTGGAAGGAGTAGCTCACTACTAACAGAGAAAACCTTATTAGTGCCGGGTCATAACTGGCATGACATAAGTGCTCTGCACATTGATCTGTTCTAGTGACTCTGGCCGAAGCCCGAAGCTGTCTCCTGGAGCTGATGAAGGGCCCTGTTCACTTTGATGCCATTTTCAACCTTATCAAATTTTAGTAAAGTTATCAAAAAGTGGCTATATTTAGTTTGCTGTCAAATTTTAGTAATTATATAAAAAATCCTGCCATTGCCAAAATTTTGGACAATGATAAAATTTGGTAAGGTTTTTTTTTGGCATCAAAGTGAACAAGCCCAAAGAGATGTGAAGGGCACCTACCATTTAACAGAATGTTCTTCAAGGAAACATTGCTGCAGCTTGAACTAAAAACATGAATGCGTCCCCGCGCCATTTCAAGATAGAAGGTAGCCGATCAGTCATTCTATGAGGCTACCACTTCGGATCCGGGCGAAGCGCAGGTAAGGTTCAGCACCACCACGGCTTGTATGTGCTCTTATAGCTTCTGTGAATGCGAGGCTGATACGCTCGGCATCCACTGCTGTGTCAGTAACCGGATGTAATTGGATGTATCGGAGTTGTTTGTTCAGTAGGTGCTCAATGCCAACTGGTGCGGTGCCGCTCCATTCAATATCTATGTAAAACAGAATGATCTTTCTGAGATTGGGCATAACCCCTGCCTCAAAGCACAGGTGTGATATATCTCCACCGCAAAAGAATTCAAGACACTCCAATGCTGGGAACCCTGCACCGAATACGAGGGATGCGCTGCATGGAGCCAAACGCTTCACGCTCAGGCAGAGTTCACTGAGTGAAGGTAGCTCTCCAAGGAGCCGAACCTCATCAGTTGACATCTCTGTAACATCAAGAACGAGGAAGCAGAGGTTTTGGAGGTGACCATTGATCCATCTAGGAACTCGACGCAACCTCCATCCTCCCAGGTGGAGTCTCTCAATATTGAGAGGAGGATTGGACAATGAACCGAGCCGGTTATCCTCATCATACCAGATACATTCTGCAAACTTAGACATGCGCAGAGATATGAGCTTATGAAGTTTTCCAAGGGAAGTTACCAGCGCATCAATCTCTCTCTCTGACAGAGCCTGTTTACTGTACAGCTCAAGGTCCTTTAGATTGGTCAGCTCACCAAGGCCAATGGCGCTCTTGATATCTAATATCTCAATTTTTTGGAGAGTGCATAGGGACTTCATGCTGCCTATCTTCCCATCAGGTAACCCTATACCACTTGGAACAATCAGGTGGGACAAGCGGGACAAATGAACAATATCTGATGGCAAACTGTTCTCATTTGTGCAATCTATTTCCAATGTTGACAAATATTGAAGTCCTCGAATTTCAGTAGGAAGCTCTAGTACGAGCGCATGATGGAGGCTTACAATCTTCAAATACCTCAACTGGAATAATTGCCCAATTGCGGTCACATCAACTCTTTCATTGCCTCCTGTCCCGGTTTTTCCCAAGTGTAATATCAACACTCGGATATACTTAGACAGTGGCAACAAAGACAGGGATACAGATACTCCAAACAGCTGAAGTGATCTGAGTTGCAACAATCTAGGAGCAGGTGTTCCTGATATTTTGGTATCTCCTGAATCACCAACTCTAGAGTCGACCAATAATCGACGGACTTTGAATTCATGTTTTCCAGACAATTCTTCTAGATTGTATGCCACGCAGATAAAATTATCCTCTGCACACCTACTTAAGATCAAATCAAGCATCATATCATGTACTCTACAAGAAACTACCTCCCCATATTTGGTTTCTTCTGGTTGAATTAAGCTTCTATTGATCAGTTCATTGAAATAACTCTTAGCAACTTCCTCTGAACTCCCCCCATGGAAATGATGGACAAAGCCTTCAGCCAGCCATTGTCTAATCAAATCATCCTTCTTGATGGTGAAGTCCTCAGGATAAATACCAAGGTATAGGAAGCATGTCCTAAGATGACGAGGAAGATCCTTGTAGCTAAGGTGTAAAATTTGCCTCATCCCTTCCAACGTGGGATTTGTGCCAGACCCCCAGGTGCCAATAGAATTACGAATACTCTCCCAATATTCTTTCTTGTGTGGTGCAGGCTGATTAGCCAATAGGCTAGCAATGGTAATGATTGCAAGTGGTAAACCGCTACATTTTTTCAGAATCTGAGCGGAAATTTCTCTAAATTGGGAAGGGCAACCATCTTCCGAGCCAAATATCCTGTTAAAGAATAGCCATCTTGAGTTTTCATCACTGAGGGGCTCCATTCTGTAAATGAATCGTCGATGATTGCAGCATACCCATCTAGCAACATCTTCCGATCGTGTGGTCACAATTATTCTACAGCCCATGCCATTTTCTGGAAAAACAGACCGAATAATATTCCATGTAGGTGCATCCCACAAGTCATCAACAACAAAAAGGTACCTTCTATGTTGTAGATATGCTCTGATGTTGTCAATGATGTCTTTAACTTCACAATATTCAGAAGACAGCCTTATCGGAAGTTTTGATTGTATTCCTTTGAGAAATCTTGTTACATCAGGCCTTTGGGAAACTGAAACAAATTCCGTGGTGTTGAATTGCTGTCCAATTTTTTGATAAACCTCCTTGGCGAGCGTAGTTTTACCCAGACCTCCAAAGCCAACAATTGGTAGGACCATTATTTGTTGATCCGCATCTGTCAACCACTTTATAACCTGTTCCCTTGGGCCTTCAATACCCACAAGATTAGCGGCTTCACTGTACAGTGCTGGCAACCGAGGATCAATGGCCACAAAGCTAGAACTAGGAGTGTCATCTAGATCAAATTTGTACCTCTTGTGCCGTTCATTTATCTCTATTAGCTGAATCTTGAGATCCTTGATATGCTCGGCAGTCTCAAGACGGGCCCTCAAAGTTCTGAGAAAGTGAGAAACCTTATCGATGAAGCCAGCTTCCACATCACCACCTCCCACGTGGTGCACAAAGTCATCGATGCAATCTTCAATATCATATGCCATCTCCCTGACCTGGTTCCTCCAAGCCTTCACCACTGGATCAAGTTCATCTGCATCCTCTAGCTTCTCGAGTAGCGCGCTCATGGTTGGGAGCTCATCTTTAAGGAACACAATATTTTTTGACATGCCTACGAGATTGGTGCACTTGTCCTCCACCAGCTTAGTGAGCTTCTCAAAAAGGGCACCTATCACACCCTTAGATGCACTCACCGCGGTTTCTGCCATTGCCCCTCCCAAATATTTTCCTCGGCTCTCCTTGAATTCGACTAGGAAGCACCAGATCAGGTTGAACCCAAGCAGCCAGCAGCAGAGCAAACCAGCATTTTCGAAGCAGAAACCTAATAATCAGACAACCAAGAAGAACTTAAATGGAAGAAATTGGGAGAATTCGCCGTGAAGGATGAACAAAATCACCATCCTCTGTGCTCTTCACTTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0402300.1 | 8 | 5965550 | A | C |
| Osa08LNT0402300.1 | 8 | 5966372 | G | A |
| Osa08LNT0402300.1 | 8 | 5967019 | G | C |
| Osa08LNT0402300.1 | 8 | 5967239 | A | G |
| Osa08LNT0402300.1 | 8 | 5966374 | G | C |
| Osa08LNT0402300.1 | 8 | 5967937 | G | T |
| Osa08LNT0402300.1 | 8 | 5967094 | C | T |
| Osa08LNT0402300.1 | 8 | 5965687 | A | G |
| Osa08LNT0402300.1 | 8 | 5965988 | C | T |
| Osa08LNT0402300.1 | 8 | 5966061 | A | C |
| Osa08LNT0402300.1 | 8 | 5966082 | C | T |
| Osa08LNT0402300.1 | 8 | 5966133 | A | C |
| Osa08LNT0402300.1 | 8 | 5966279 | T | C |
| Osa08LNT0402300.1 | 8 | 5966354 | G | A |
| Osa08LNT0402300.1 | 8 | 5966516 | A | G |
| Osa08LNT0402300.1 | 8 | 5966576 | A | G |
| Osa08LNT0402300.1 | 8 | 5966973 | G | A |
| Osa08LNT0402300.1 | 8 | 5967005 | C | A |
| Osa08LNT0402300.1 | 8 | 5967340 | T | C |
| Osa08LNT0402300.1 | 8 | 5967435 | C | T |
| Osa08LNT0402300.1 | 8 | 5967585 | C | T |
| Osa08LNT0402300.1 | 8 | 5967659 | C | T |
| Osa08LNT0402300.1 | 8 | 5967902 | A | G |
| Osa08LNT0402300.1 | 8 | 5967911 | G | C |
| Osa08LNT0402300.1 | 8 | 5967992 | A | G |
| Osa08LNT0402300.1 | 8 | 5968106 | A | G |
| Osa08LNT0402300.1 | 8 | 5963711 | T | A |
| Osa08LNT0402300.1 | 8 | 5963738 | C | G |
| Osa08LNT0402300.1 | 8 | 5963759 | G | T |
| Osa08LNT0402300.1 | 8 | 5963848 | T | G |
| Osa08LNT0402300.1 | 8 | 5963874 | G | A |
| Osa08LNT0402300.1 | 8 | 5964306 | C | G |
| Osa08LNT0402300.1 | 8 | 5964320 | C | T |
| Osa08LNT0402300.1 | 8 | 5964335 | G | C |
| Osa08LNT0402300.1 | 8 | 5964360 | A | C |
| Osa08LNT0402300.1 | 8 | 5964428 | A | G |
| Osa08LNT0402300.1 | 8 | 5964772 | C | T |
| Osa08LNT0402300.1 | 8 | 5965029 | A | G |
| Osa08LNT0402300.1 | 8 | 5964989 | C | T |
| Osa08LNT0402300.1 | 8 | 5964937 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0402300.1 | osa-miR5530 | Translation | 3.5 | 17.396 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR818f | Translation | 5.0 | 13.193 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR168a-5p | Translation | 5.0 | 22.29 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR1850.1 | Cleavage | 4.0 | 24.446 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR1850.1 | Translation | 5.0 | 13.162 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR1853-3p | Translation | 4.0 | 23.994 | 1 | 22 |
| Osa08LNT0402300.1 | osa-miR2864.2 | Translation | 5.0 | 15.857 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR2864.2 | Translation | 4.5 | 19.837 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR2866 | Cleavage | 5.0 | 21.36 | 1 | 20 |
| Osa08LNT0402300.1 | osa-miR2870 | Translation | 4.0 | 20.332 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR2931 | Cleavage | 4.5 | 12.575 | 1 | 20 |
| Osa08LNT0402300.1 | osa-miR5159 | Cleavage | 5.0 | 20.63 | 1 | 24 |
| Osa08LNT0402300.1 | osa-miR5497 | Translation | 4.5 | 14.222 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR5827 | Cleavage | 4.0 | 18.466 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR166c-5p | Translation | 4.5 | 14.026 | 1 | 20 |
| Osa08LNT0402300.1 | osa-miR395b | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395d | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395e | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395h | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395i | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395j | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395k | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395l | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395s | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395c | Cleavage | 3.5 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395a | Cleavage | 3.5 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395m | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395n | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395o | Cleavage | 4.5 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395p | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395r | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395y | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395g | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Osa08LNT0402300.1 | osa-miR395q | Cleavage | 4.0 | 11.567 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0402300.1 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Osa08LNT0402300.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Osa08LNT0402300.1 | 8 | nfb8 | Morphological trait | Panicle/flower | RG108 | RZ562 |
| Osa08LNT0402300.1 | 8 | hd8 | Physiological trait | Flowering | RZ562 | RG978 |
| Osa08LNT0402300.1 | 8 | nfb8 | Morphological trait | Seed | RG108 | RZ562 |
| Osa08LNT0402300.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)