© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0036900.1
GATCAGATCATTTGAGCTTTGATACCAGTGTGTAAGAGTACATACATAGTTCAAACTGACATACGAAAAGTGAAATTATGTCCCCCTCTTTATTCTGAAATCTGAATGACAAAAGGCTACACGCGAAACCGCTGTGATTGGTTTGCGACATCGCATCACAATACAAACTTACAGGGAAAGGGGGAAAATAATTTGCAGGAAAAGAACGGCATCATTCAAGCCCCCGTTTTCACTTCCCTGCAGTTGCAAATGCTTGTTCATGTGATAACTGCAAACTCTTTGGCGCCATACTAGCTACATCCCGCTGCACAGGCACTCGTTTATGTGACTGCAGAATAGCAAAAGGAGATGCGAATCGCAGGAGGGAAACGAACTCCCATTGGAAAGAAACGGGGAAAATGGGAGGAAAACAAGCTACACTGGGAGCTCAGTCCCATGAGCTCCTGTTACTACTCGACGCTAGCATACTGGGAGTGAGATGCTGCAAGAAGTGCAGCTCCGATGCCAGAGCCATCGTTTGCCAACTTGACAACAACTGATGAGGCAGCCTCCTCTCCAAGCAGGTCTGCAAGCGTTGCTTCTAGGCAGGTTCTGAACTTCTTGTAATGCTCATAGAGACCACCATCCAGAGCAATGACAGTCCTCTGCTTTTGACTACCGTCACTTGGCACTCTGTCCCTGCCCAGCTTCTTTAGAATGCCATATATACCAGCAGCAGCTAAGCGTGCACCTCTCTCTGCAACGAGGTCGCAGACATGAAGGGTGATGTATCGTGCTTCCAGGGAAGTATCAGCGACCCCCAGGATATCCTTCAGCTTAGCTCCCAGGTGTTTCAGATCATGTGAGGTATCATGATGCATCGCTGACATGTCCGGCGTCCTCAGTATAAAGCGCTGCTCCAGCTTTGTTGGAACAACATCTCCAAACAAGGAAGCATCATGAGCAAGCTTAAGCAAGATTCTGCGCACAATCTCTCCAAGATACATGCCGGAAATCATCTTTTCATATATCTGCTCGCCTGGGTTTAAACTTTCAAAGTCCAAGGCATTATCGTAATCTGAACGAGGAAGCCTTTCTGACTTGAAGTTTCCCCATTCCATGTTAATCACCATATTTCCTGATCTAGGTAGTAATCCAGTCCATTTTGGAATTGCATTTGCATGCTCCACGTAGGCTGCGTTTGTGCCAGTGCCTAATATTACAGCAGCAGCAACGTCATTATCAACATATCTTCCGCCAGCCAATGTGCCTACAGTGTCATTAACAAGAGCTGTAACTTTCATATCAAGCCCTTGCCTTTCCATAGCCCTGCTCAATTCAGCCACAACATCTTCCCCCACCGTGCCATTGATGGAAAATCCCTTTGTCCACTTAATAAGAGTGCCTGATGATATTGATGTTTGGTGCACTGGGAAAGAAAAGGTGAAGCCTAACTCTCTCTGCCTGCCCTCTGGCAAGTGGAAATCCTCTCCCTCGGTCTTGACAAAACTTTCCAACTCAGCCGCAATGAAGTCAAACAGTTCCATAGAAGTCCCAACCATCAGGTGAGGTGGAATGGCAACCTCTTCGTACTGTTGACTAACAACACGCTTTTCCCTTCCTCCAAGCTGAACACGTATAACACGGAAATTGGTGCCCCCAAGATCGAGAGCATAGAACAGTCCGTGCTCATCCCAAACGAGGAATCAAAACTTTTATAGCTTCCAAGGCACCCCTCATGCTGTGCTTGAAAGACAGCATATCTCTTTGCCTCTCTAACTTTGTTGAGATCCACTCTCAACGGTGGTGTACCTGAAACCAATGAACTGGATGATGCTGCCACCTTGTCCTTGTCCCTGTCCAGAGCAACTTGAGAAGGTCTGTCCCTCCGCGACGGCTCGATCTTCCGACGCTTGGGAGGCGGCGCCGCCGCCGCCGGTGGGGAGCCAAGCTCTGATCCCTCCGCTGCCATATGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0036900.1 | 1 | 31010773 | A | T |
| Osa01LNT0036900.1 | 1 | 31012484 | T | C |
| Osa01LNT0036900.1 | 1 | 31013416 | C | T |
| Osa01LNT0036900.1 | 1 | 31014758 | C | T |
| Osa01LNT0036900.1 | 1 | 31014760 | A | C |
| Osa01LNT0036900.1 | 1 | 31014773 | T | A |
| Osa01LNT0036900.1 | 1 | 31017069 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0036900.1 | osa-miR164a | Translation | 4.5 | 16.494 | 1 | 21 |
| Osa01LNT0036900.1 | osa-miR164b | Translation | 4.5 | 16.494 | 1 | 21 |
| Osa01LNT0036900.1 | osa-miR164c | Translation | 5.0 | 16.494 | 1 | 21 |
| Osa01LNT0036900.1 | osa-miR166l-5p | Cleavage | 4.5 | 11.224 | 1 | 21 |
| Osa01LNT0036900.1 | osa-miR166h-5p | Cleavage | 5.0 | 7.919 | 1 | 21 |
| Osa01LNT0036900.1 | osa-miR164f | Translation | 4.5 | 16.494 | 1 | 21 |
| Osa01LNT0036900.1 | osa-miR530-5p | Translation | 5.0 | 22.441 | 1 | 20 |
| Osa01LNT0036900.1 | osa-miR2097-3p | Translation | 4.0 | 20.041 | 1 | 22 |
| Osa01LNT0036900.1 | osa-miR2118d | Cleavage | 5.0 | 21.868 | 1 | 22 |
| Osa01LNT0036900.1 | osa-miR3981-3p | Cleavage | 5.0 | 20.282 | 1 | 21 |
| Osa01LNT0036900.1 | osa-miR2275d | Cleavage | 3.5 | 18.839 | 1 | 22 |
| Osa01LNT0036900.1 | osa-miR5524 | Cleavage | 5.0 | 12.03 | 1 | 21 |
| Osa01LNT0036900.1 | osa-miR396a-3p | Cleavage | 4.5 | 16.215 | 1 | 20 |
| Osa01LNT0036900.1 | osa-miR396b-3p | Cleavage | 4.5 | 16.215 | 1 | 20 |
| Osa01LNT0036900.1 | osa-miR5490 | Cleavage | 4.5 | 11.637 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0036900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0036900.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0036900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0036900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0036900.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0036900.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)