>Osa08LNT0404500.2

CCAGGTCATGCTTCAATACATATACAACACTGCAAGCTGGGATAGAACGAACAGTTGCAATCGGGCCAGTTCATTAAGAGGAACATGGCACCAATCATTCGAGTCAGGTACATAAATCCTCAAGAAATGCCTTCAAGTGAACAATGTTTGCTTTCCTGTATTTACAACCAATCAACCAACATGTTCTTGTTTGAAATTCTCTTCTTTTGTAGAAAAATAATCAGTAAGCCAAACCCAACGGTTCTAAAAAGATATTCCCTCCAGTCAAATTATTTGACATGTTCACCTACAAGAAGAATCAGCTACGGCTAAAATTTCTGGCAGTTGTTTCAGGCTTTCAGCACCCATGTTGCACCTCTTTGCAACATTGCTATTTGCTTCAGCAGGTTCTCAAACAGTAGGATATCCTTGGACAGTATGTGGTTCTGAACCACCATGCAGTTGTATGAAGGTGCAGATTGGAGGATTAGGACTTCAGCCTGCACAGTTATTCTTCCTAGTAGGTGGTCTCAATACATGAGTCATGACTATTCTATGATGAACTCGATATGTGGTTGGAAAGTCAATCCCAGGTTGACCTAATGTTCCAGTGCATCAGAAGCCACTCCCTATCGGATTCCATGAATCCTAGTCAAAAGTTCAGCAGAGAACATTGCTTTGTCATTTAGAGCACTCACCTGATGACTTTGGCCCATGCTATTTTAAGTTTCTGATGGCTGAGAACTATTAACCAAACTGGCTATAGAGTGTTGACACAAATTTCCTACGGACAGAGAATGATGCTCCAACAGTCCAGTGATCCAATCCATACAGATGTAGCAACAGAGAAACTGAGACAACTTCTGAGTATCCCTGAACCGTGATTGGCATAAACATAAAGCTTCTGAGTATCACTTGTGAAGCTTGTGCTTCTAGGCGCAGCTCCTGGGACTTAGCAATATTTCCAAAATCCTGTGCGCTTGTCGTCCAAACTGAAGTACCTGGTGTTGCCCGGGTTGGCGAAGCCCTTGCCGTTCTTCCGGGTGGTGTTGTTGAGGTAGCTGTGGATGCAACTGACACAACATTCATCAATGGTTTACCAGTTGTGCAACCTAATATCAAATCCAAGTAGTGGGTTCAGTTACTTCTCGATATCTCAAAGCAAATAACAAATTAAGCATTCTGTTGTTATAACTTTTTCACGTGCACACTCCATACCAGGTTCCCATAACAAACTTTGCACCAAATTTTTTGGAGCTCGTAATCTGACAAATGAGAAAAGAACGAATTGTGAAGGAAGTATTACCAGGACATGCTTCAATATATATATGGAATTGAAAGTTGGGAAAGAACGAATTGTTGCGGTCCTCCAGTCAATACCAAATGTTTGTATTCCAGTATGTACAATCTGTCATCTACATGTTCTTGTTTCAGATTTGTTTCTTTCCTACAAAAAGAACCAGCTAGCCATACCAGAAGGTTTTAAAAAGACATGGGAGACATTTCCCATCAATCAAATTTGCATGTCTTATCTGAATGAAATTAACGTTTGCAGTATGCTACACTAACAAAACATTGCTACGGTCAGCTTCAGCTAAAATTACTGGCAGTTATTCTTCAGCACCCATGTTTCAGATTTTGCGCCTCTTTGCGACAATGCTATTTCCTTCAGCATATTTACAAAGAAAAGGACAGTCATTTTTACAAATAAAAATTGAGGAAAATCATTTGACTCAAGGATCAGAATTATTGCTTACATGAATCCCTGAGCATCATAAAATACTTTTCAAAATGTAGGATTCTTCATCTACCTGATCAAAACTATGCTGCTATGGTCTATTTTTCCCTGTCCATGCCAGGACGAATTTGGTTCAGTCTCAACGGTTGTCTGCAACTCTGCACATACCTGATCTTGTTGCTAGTTATTTGCAACTTTGGTAATCACATCTTCAGACAATTGGCTGAAAATATTGGATGTTCCAGCCAAATCTTTACCGTCATAGTCTGGTGGTCTTCGCTGAAGCCGGCGGCGAGCGCGCCGTCGACCTGGCCGGAGCTGAAGCTTCCCACCGCCCGGCCGCCGCCGCCGATGCCACGGAGACTACGCCAGCGGGATCCAGATCCTCCTGGAGCAGCGCGGGCGCATCCGCAGCCGGCTGCTCGCCGCTGGAAGTCGGGAAGCGCCGAAGCGGCGCCGTCGGAGGAGAGCGAGCGAGAAGGGGAGGGGAAGCGGTGCCAT

Explanation	CPC Score
noncoding	-1.21741

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0404500.2	8	8175674	G	T
Osa08LNT0404500.2	8	8176258	T	C
Osa08LNT0404500.2	8	8176335	T	G
Osa08LNT0404500.2	8	8176835	C	A
Osa08LNT0404500.2	8	8176845	T	C
Osa08LNT0404500.2	8	8177066	A	G
Osa08LNT0404500.2	8	8177270	T	G
Osa08LNT0404500.2	8	8176522	A	C
Osa08LNT0404500.2	8	8175594	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0404500.2	osa-miR5791	Cleavage	5.0	13.27	1	21
Osa08LNT0404500.2	osa-miR5813	Translation	5.0	13.591	1	22
Osa08LNT0404500.2	osa-miR1865-3p	Translation	5.0	13.081	1	24
Osa08LNT0404500.2	osa-miR2869	Translation	4.5	18.568	1	21
Osa08LNT0404500.2	osa-miR2922	Cleavage	4.5	18.333	1	20
Osa08LNT0404500.2	osa-miR5504	Cleavage	3.5	15.734	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0404500.2	8	nan	Resistance or Tolerance	Drought tolerance	RM72	RM331
Osa08LNT0404500.2	8	qDSR 8	Resistance or Tolerance	Other soil stress tolerance	RM3572	RM404
Osa08LNT0404500.2	8	hd8	Physiological trait	Flowering	RZ562	RG978
Osa08LNT0404500.2	8	dth8	Physiological trait	Flowering	RG333	RZ66
Osa08LNT0404500.2	8	qALRR-8	Resistance or Tolerance	Other soil stress tolerance	RG978	C1121

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus