>Osa08LNT0404800.2

CAATCAAATATGGCTCACTGAATTCTCATTGAGAAGCAGTTATCAGAATGTGAGTAACATACATGCTATGTCAACATCTTGGAAGGATCACAATTATAAAGTATCTATACTGCATTAAAAGAACTTGAGTATACCATAACATAAAAAGGATTATTTCACATGACAATCTCAGGTTTCAGGATGCTTGATTTGATCTCTTTGTGCGGGAGAATAACACCGCCGTTGGTATAGACCTCATCACCTACATGTACGTCCTCTCCTAGGATAGTCATATTTTCTATCCGTGCCCATTGTCCAACAGTTGAGTGCCATCCAATAATGCTGTTTGATATGCAAGCATGCTTCTTAATACGCACGCCACGCATCACCGTGCAACGGGAAAGCCTCACACCATCCTCCACGACGCATCCAGGACCAATAGCAACATCAGGACCAATCAGACAGCCTTCGCCAATCTTCGCACTCTCGTGAACTAGCACATTCCCAACAATGTGTGCTCCAGTGGCTAACCTGTTGGCTGATCTCTTCCTAAGTGAATCCAGATAAAGGCGCAAGCCTGTAATGTAATCCCTTGGTTGGCCAACATCCATCCAAAAACGGGTTCAACAAGTAAATTCCTGCATTGATCTTGTTGCCTACAAATATTTTTGGTTTCTCAACAAATTTTTCCACCATTCCAGTGGCCTCCTCCATAACCACAACACCATATTTTGATGGTTCGTCCACCTTGGTGACCATAATTGTTGCCTCACCACCATGGTTCTTGTGAAATTTTATGAGCTCAGCAAAAGGGTATTCACTTATGACGTCACTGTTGAGGACAAAGAATGGCTCACCAGATCCATCCACAAGCTTGTCCCTTGCTAGAGCAAGAGGGCCAGCAGTTCCCAAGGGCTCAGTCTCTTGGGAACACGTGATTGTGATGCCAAGCTTATCCTCAAAGTCCTTCAGGAAATTGAGCATTACCTCCGGGCGGTAGTTGATGGCTAAAACAACTTCTGTTACTCCAACTTCTTTCAAGGCCTCAATCTGATGCAGAATCATGGGCTTGTTCGCGAAATCAACAAGAGGCTTTGGGAAACTGAGCGTTAAAGGCCGAAGGCGAGTGCCGAAGCCTCCAACCAGAATGAGCGCCTTCATGGTGAATCGCCTCCTGTTCTTCCCTCCCTAATCCCTACTCCGGCGGAGGGATCCTCAAGCAAGGCTTGGGAAGGGGAACCAATAGAAGGGATCAGCCTGGAAGATCTCTCTTCCTTCTCCACGACCAGCCCCATTGGAGGTAGGTAGCACAGCTGCGGTCGAAGGAGGAGCCTTTGTGCTGTGCTAGATTGGGAATCGAGAATTGGATGGGACTTTATAGAGGCGAAGTGGAGAGGCGACGCGAGGAGGGGAAGGGGGCCCACAGTAGAGATGCGGTTGTGTACTTGTGTGTGTCTCGCTCTCGCGAAAGAAAATTCGCGACCACAGGTGACACGTGTTCCATCACAAATCTCAAAGCAAATCCCATCATCTCCACAATCTTGTGTTTGGTTTATGGGTAAGGTATGATACGTTAAACTCATCAAGTTATTGGATATCTATATATCTATATAGAAACGACGGACGAAGCGGACTAATGGAAGCCTTACGAATTTTTTTATTAGATATAGATATCTATATACCTAATTAAAAAATAAGTAAGGCTTCCGGTTAATCTTTTCGTCCGTCATTAAGAGTGGGCCCACACGATAATTCGTCGCTAATCCATGATCCGAAAGCGTGGCCACGATCTCTTACGCCTGCAAATAAAGGAGAAAAGAAAAATAAAAAGAGAAAACCTTGTTTGTGGAGCAGCCCATCCAAAGCAGCCCGGATTGGATTAGTGACGAGGCAGCCCACCCAAAGCAGCAGCAGGCCGGCCCAGATAGCAGCCGCAGCCCACCAGCGAGCCCACAGAGCGGAGGAGAAGCAGCCCACCAGCCCAGCACAGTACGTCCGTTGTGTTGTGGCGGAGAAGAGGGTGAGGACGCCGCCGAGGAGCCAGGGGGAGGGCACCGCGGCTGAGACGCCGGCTGCCAAGGGAAGGGAAGGGCGCCCTGGGTGAGTGGTAGGGGAAGCGACGTCGTCGGTGGGGGGAGAGGGAGGGCGCGCTGGCTGAAGGGTAGGGGAAGCGGCGTTGCCGGTGGGGGAGGAGGGGGCCGGAGAGAGGGACTGAGGGAGAGGAATTAACGCGC

Explanation	CPC Score
noncoding (weak)	-0.897918

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0404800.2	8	8343405	A	G
Osa08LNT0404800.2	8	8344367	C	T
Osa08LNT0404800.2	8	8342477	T	G
Osa08LNT0404800.2	8	8342504	A	G
Osa08LNT0404800.2	8	8342669	G	A
Osa08LNT0404800.2	8	8343163	A	C
Osa08LNT0404800.2	8	8343226	A	C
Osa08LNT0404800.2	8	8343832	A	T
Osa08LNT0404800.2	8	8344180	T	C
Osa08LNT0404800.2	8	8344346	G	A
Osa08LNT0404800.2	8	8344390	T	C
Osa08LNT0404800.2	8	8344422	G	A
Osa08LNT0404800.2	8	8344551	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0404800.2	osa-miR6246	Translation	4.0	24.731	1	23
Osa08LNT0404800.2	osa-miR160e-3p	Translation	5.0	16.807	1	21
Osa08LNT0404800.2	osa-miR1860-3p	Translation	5.0	11.331	1	22
Osa08LNT0404800.2	osa-miR2097-3p	Cleavage	3.0	19.689	1	22
Osa08LNT0404800.2	osa-miR169f.2	Translation	4.5	22.215	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0404800.2	8	hd8	Physiological trait	Flowering	RZ562	RG978
Osa08LNT0404800.2	8	dth8	Physiological trait	Flowering	RG333	RZ66
Osa08LNT0404800.2	8	qALRR-8	Resistance or Tolerance	Other soil stress tolerance	RG978	C1121
Osa08LNT0404800.2	8	nan	Resistance or Tolerance	Drought tolerance	RM72	RM331
Osa08LNT0404800.2	8	qDSR 8	Resistance or Tolerance	Other soil stress tolerance	RM3572	RM404

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus