© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0002400.2
CCTTAATGCAAAAAACTACTGCACTGATAAAATTACATCCAGAATCATGTGCTCAACTGCTCATATGCTGTTCTACACTGATGCATCCTACCAAAATACTACTACAACAACTGAACTACCACAGGAATGCTCCTGCATTTTATTTTGCTACTGCAAGGAGCAATGGAGCTCATAGACTCCAAATCTTTATGACCAAGGCTAAGATAAATAAAACAGGGAGCCGACAGGTTACATACATCTCAGCATCTAACATAAATTTGGGAGGAAGAAAGCTTGTGACCTGTGACTGATTTTGTTTCACAAGTCAAAATCAGTTAGTTGTGATGGATCAAAGGGGAATGGGTAGGGTAGGCAGACAAGAAGTCCAAAGAGCAAGATGGCTACACCAATGCTGATGTAATTGTTCTCAGGTTCTGTTATTTCTTCAGAGAGAGGGGAAATCGGTCCTCTCTGCAAGAAGAAGATCAGCACCACCCAGTAGAACGCGACGTCGTTGAAGAGAGCTGAAATTCCAAGAAGTCCAATGGCCAAGCTGCTGATTCGAGACGATATCTTTCTTCCCCACATGGCAAATGCTATGCGGCCGCCATCAAGCTCTCCTGCAGGGATGCTATTGATGGCATTGATCAGGAGACCAGCCCAGGCCCATAAGACCAGTGGATTTATGGATAGTTTTGTTCCTTCTTTTAGAGCATCTCCAAGAATAAGCTTTGCAAGACCACCAACAAGAAATGATTCATGAAATACTGCTGGATCTATCACAAGGCCAAGGCCATCACTTGGAGGTAAGATGAAGCCTAGCAGCAAAAGAACAAATCCAAGGGAGAACCCTGCCAATGGTCCAGCAGCTGCTACCTTCAGTAGGTCCTCACGATTGCGGACTATATTGACAATTCTGGTAATAGCACCAAAAGATCCTATCTGCCAGCTAGGAACAAAATATGGTACGGCAAGCTTGATTCCAGTATCCCTAGCAGCAAGGATATGTGCAATCTCATGAACGCCTATTATGGCCGCAGTTACTAGGGCGCCATAAACTCCATCTTTTAATAGCTCAAGGTTATCAAATGTTGATAGCAAGTTGTCCTGTAGCAAAGGTACATTTCGGAGCAAAAGGGTGAAGATGGTAACTACTCCAAATGAAGCAGCAGCAAACCACTCTGGGACAGCTGTAGTTTCAGGCTGCAATGTTTGCCTAGGTACAACTACTGCAACTGGCTTATCATCCTCTGGGTTAATGAGAAGAAAAAGCTTATATTGATCACCAAATTTGTTCTGCAGCCGATTTGTGATCTTCTCATAACTTTTTGCTGGCTGACCACGCAAATTTCCCTTAAACAGTATTCCACCCTCATAAGGCTCCTGGCTGGTCACGAAAAACGTGTCAAAACCAAAAACTTGATCCTTGAGAATGTCTATTGTAGCCTTGGGGATCCTGACAGATTCATCAAGTTGTTGCTTCATTCCTGGCAAAGGTGAACCGACAGCAACATCAACTACTTCCACATTTTCCTGTGCATCACTGGCTGGAGTAGCATCTCCATCAATGTTCTGAACTGTGTCACTGGAGCTGAGTGGTTCTGTATTTACAGTTTCGTCTTTCGTATTATCTGCATTAGTCTCACTTTCTGCAGATCCATTTTCTTGTGTAACACTATCAACCGAAGGTGATGAAGCATCATCTCCAAGCTCTTCTTTCTCCTGGAAGAAACAAACAAAAGAGAAAACATGTTTACCCCCTTGGATTCCTACTAACATGAATAACATGAACTTACTCATCAATTCCACATTTTTTAGTCGCTTTAACTCCACTGAATATTTCACCACTCGTCGCCATTGCCGTCGCCGTCGGGCTCAGTCTCAGTCATTGCCTGGCAGACAAACCTTCGGTTCCTGATCTGAAGCGAGTGGGTGGAGCGAAGCTTGAGACCGAGGCGGGCGGGCCTCCCCGTCGCCGGCAAGGAGGTCGACGCGAGGAGGATGCGCTGGCAGCATCCGTACGCCGCCGCGGCAGCGGCGGCGGAGGACTGCGACGGCGAGCAACTCATGGCGGGTAATTGCATTCGCGGCCGTGGTGGTGGAGAGCGCGCGGCCTTATCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0002400.2 | 1 | 2268398 | C | T |
| Osa01LNT0002400.2 | 1 | 2267965 | A | G |
| Osa01LNT0002400.2 | 1 | 2268052 | T | C |
| Osa01LNT0002400.2 | 1 | 2268154 | G | A |
| Osa01LNT0002400.2 | 1 | 2268502 | T | A |
| Osa01LNT0002400.2 | 1 | 2270064 | C | T |
| Osa01LNT0002400.2 | 1 | 2270233 | A | C |
| Osa01LNT0002400.2 | 1 | 2270411 | T | A |
| Osa01LNT0002400.2 | 1 | 2270425 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0002400.2 | osa-miR5812 | Cleavage | 5.0 | 21.099 | 1 | 24 |
| Osa01LNT0002400.2 | osa-miR168a-5p | Translation | 4.0 | 23.23 | 1 | 21 |
| Osa01LNT0002400.2 | osa-miR408-5p | Cleavage | 5.0 | 19.218 | 1 | 21 |
| Osa01LNT0002400.2 | osa-miR395v | Cleavage | 4.5 | 8.449 | 1 | 21 |
| Osa01LNT0002400.2 | osa-miR2863c | Translation | 4.0 | 11.722 | 1 | 24 |
| Osa01LNT0002400.2 | osa-miR5150-3p | Cleavage | 5.0 | 22.006 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0002400.2 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0002400.2 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0002400.2 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0002400.2 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)