© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0406200.1
CGGGTTTTCACTTATTTGATGGTTTTTACCGGATATGTCCCCCTTCAAAATTATTGCCAAATTAACAAATACAACTCCAAACAACTATGAGCTAATAACCAGAACAAATTACCCAATGAGACTAACTAATAATAATTGAAGAATTAGATATCACTAACCCCCGCAGAAAAAAAACGCAAAAAAAATATCACTGATCCCTTCGATCTGATAAATGGTTAAAATCTATCTGAATCAGTAATTTTTGTCGCAAATATTACAGTAGCATCTGCCCTTGGGACCCGATCCCCTGCACCTGTAACTCTTGACATTTTGCTTGGTGAATTTCGAGGAGATCCAGCAGGAGATCTTGCACATAAAACCCGCACAGAAAGGCATCTTGGTATTAGATTGCCAGCACACTCCTGCAGAAGTAGGATTGCCAAGTGTTAACACAAGCACAATGATCAAGCAAACAGCAGCTTTTCTGCCATCCATGGTTGTGAGCAAAAGAATGTGTAGCTATGTCAATCTTTGGGTGAATATATAAGCAGCAGCAACACCTCAGAGTTTGAATGTTTGATTACCTGCATCTTGTATGCATGGCCCTGTTCAGTTCCGAAATGATCGATTAGTAGATCTAGTCTTATCATGAGTACAGTTAGCGCCGCCTAATCAGCTATATTCCCGTCTACATGCATGGGCGCATAAAAAAGTCGGTACAAGAGGATAGGCCCATGAATTGAACAAGCAAAACAGGAGGCACAAAATAGCTAAGACAAGGTCAACGAGGAATATAAGATGGGGGCACCTATTCTGCAATCGATTGCAATTTCGGATTTGATCAGTTGATCCCATGCGTCATTAGATTTGCATCTTACGGCAATACTAACCCGAGAAAAAAAAAGAGCTTTGTGCGAAAAAACAAAATAGGATGAAGCAGCCCATTGCGCTATTTATGAAACCACTTTCGGGGGCCCATGACAAGCCCCTAATTTGATCGCTTTGGGCTTTTGGTTTTGCCTAATAGTTTGGACTAATATTTGGGCCCTTGCATCTGACATCAGCCCAAAAAATGTTGTATACTGTATGCAGCAGATATATGGCTTGAAAAAAAGGTTATAATCTAGACTGAGATTTCAGGCATTAATTTTACACAGATGCAGCTAAAGAACACCATCAGTGTCACACACAAAAAAGAGTGAACGCATGAAAATCATGTGAAGTATCAGGACAATGCCGCCTAAAAATTAGAACTCATATGTTGCACCACCTCTAGCAAAAACAAGTTCTGCTTCGCCACAAGAGCAAGCTGCTGAAAAAAATTCTTCTCTTGCTTGCTTGCACATTGATGAATTCGTATACTGCACCTGAGAAAAAGTCGCGCTGACCTCATGCCGCCGCTCGACGAGATGGGAGAGGAAGGTGACGCCGCCGCTCGTGGCCGCCGATGGACAAAATCGCGCCACCAGGGAGACGGGAGAGGGAGGTGATGGATTGCCTTCTCCGCAGTAATTTCTGAGATTGAGTCGGGGCAGCGGTGGTGGGGAAAAGTCATCGGCATATCTGTTCGATGGTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0406200.1 | 8 | 9488532 | G | A |
| Osa08LNT0406200.1 | 8 | 9487809 | A | G |
| Osa08LNT0406200.1 | 8 | 9488311 | C | T |
| Osa08LNT0406200.1 | 8 | 9488382 | C | T |
| Osa08LNT0406200.1 | 8 | 9488801 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa08LNT0406200.1 | DTM_#DNAt_MULE_japo_Os2453nt | Chr8 | - | 9488843 | 9491992 | 2965 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0406200.1 | osa-miR5179 | Translation | 4.0 | 18.524 | 1 | 21 |
| Osa08LNT0406200.1 | osa-miR5832 | Translation | 4.0 | 16.803 | 1 | 21 |
| Osa08LNT0406200.1 | osa-miR159c | Cleavage | 4.5 | 13.553 | 1 | 21 |
| Osa08LNT0406200.1 | osa-miR159d | Cleavage | 4.5 | 13.553 | 1 | 21 |
| Osa08LNT0406200.1 | osa-miR159e | Cleavage | 4.5 | 13.553 | 1 | 21 |
| Osa08LNT0406200.1 | osa-miR1847.1 | Translation | 3.5 | 18.185 | 1 | 21 |
| Osa08LNT0406200.1 | osa-miR2098-3p | Cleavage | 5.0 | 18.206 | 1 | 20 |
| Osa08LNT0406200.1 | osa-miR2118d | Translation | 4.5 | 14.533 | 1 | 22 |
| Osa08LNT0406200.1 | osa-miR1847.2 | Cleavage | 4.5 | 17.485 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0406200.1 | 8 | hd8 | Physiological trait | Flowering | RZ562 | RG978 |
| Osa08LNT0406200.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0406200.1 | 8 | hsa2(t) | Physiological trait | Sterility | nan | nan |
| Osa08LNT0406200.1 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Osa08LNT0406200.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RM72 | RM331 |
| Osa08LNT0406200.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)