© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0407000.1
TGATATAACACCAGATACAATAAACATATCATGGCATGGATCGGCTTAGATGTGCAATGAATCCAAGCAGAGCACCCCACACATGAAGTTTCTCAGGTCTCCTTGTTGCTTAGCCTCAGTAAGCGATACAGTACCTATACACACTAGGGGTTTGGAGATCTATACAAGGGGGACAACTGTAAGTATCATGGCTTCCCGAGCCTAGATGCTTCTATCCAATGGTGCTCCACAGAATGCCGGCCCTCAACTCATGTACAGAATCTAACACAACAATAGCTCCCCGAACCAATAAATACCACAAACTAATACATTAATCGAATCAACCCTAACCTCACAGGATCAATTATTTTGGACAGGAACTACCGCGGAAGTATCTTTCAAGAGGGTATTCTTCATGTCATCGGGATTAGTTTTAATGCTGATAAGGGTTTGCGCAGACTCCACTGCCTTCTCACCACCGATTTCTGAAGTCTTGCCCTTCATGGGCTCATCGCCGCCATCCTTCAGCAGACTGATCGGCTGTTTCTGTTCTGATGTTGAGGTCATTGTGCTGGGCTGCTCAGATGTTGTCTCTGCTGGAATGATCATAGGAACAGGCCCATCCTTCGACTCACTGTTGTTTCTAAACGGTTGATCATGGTTGTGCTTACCTTCATAGGTCACAACAATATTGTTATCATCGTCTGGTGCCTTCTCAACATGCTTACGGACAGGGCACCCATCATGAGTACAACGGTAGTAGCTCCTAGGGTTTGGATTTCCCTTAACAATTTTCTGTCCATATTTGCGCCATCTATACCCATCACTCGTCTTTCCAGCCTGTACAATAATCTTTTGCTCTCTAACAGTTCTGAGAACTGGAGTCAAAGGTGTGCTAGTTTCAATTATTCTGCTTCGTTTTGGCTGAGGCTCTGTGCTAGGATGATCATCTTCTGATTTGTTACCAGCATCACCTTCACAATCACTTGAGCAAAAAAGCTGCTGTTCAGAAGCTTCAGAGACAGCACCCGGCTCTAATTTACATCCCGGTGACGGGGATTCTATAATTTCATTGTTCACAAGTCCCAAGGTTTCATCATCTCCAGAGGAAGCAGTAATATGAGCCACTCTCTCTTTCACAAATCTGGTCTTTTGTGGCGGTTCATGATTATGTGTTCCTCTGTAAATGATTTCCACCACGCGGCCATCAGGACAATGCTCGACCTTCTTTTTAGCCAAGCAATTAGAGTTGGTACATCTATAGTAACTCCTGGAATTTTCACTACTTTTCACTTGCTTCTGACCATACTTCCTCCAGTTGAAGCCATCACCAACCATGTTTACAGACACATGATTGTGTGGTCTTGACTGAAATGAGGCTGACTTCTCTAACACTGATCTGCGAACACTCCCTTCAGTTCCTGAAGGTGATCGCTGCAGGGGCATTACAGCTTTAGGTGTTATAGGAAATGGACTGGGCAGCCCTTCTGAATATGGTGTGGTTGGTGACTGCAATTGTATTTGTGCCTGAGCCGTCACACTCGCCAAAGCTGCTTGATGGCTCATTGAAAAGTGACCCGCAAATGCAGGAGACGCCAAGAAGCATGGCACGGCCACCATCGGCACCGCTAGGATGGGTGTCTCCGCGCCAACACCAGCCGGCCGCCGCTTTGCCTCCACCACCTCAACCTTCCCCTTCTCCTTCTCTTCCCCACCCTCCTCCTTCACCTTCACCTTCGTCTCCTTCTCCTTCTCCTTCGCCTTCCCCTTACCCTCCTTCTCCTTCCCCTCCTCCACCTCCATCGACTCCTTCCCCTTCCCCTTCCCCTCCATCTCCTTCTCGGCCTCAACCTTCTCTGTCTCCTTCTCCTTCCCCGTACCCTTCACCCCCACATCCTTCGGCCCCTCCTCCTCCTCCTCCGCCTTCGCCCCAGGGGGCTCCGCCGCCGCAGCCGCCGCCTCCGGGGCAGGGCGCTCCATCCCGGGCGGCGCCGCCGGATAGCCGTCGGGCATGGAAGATTCGCGGAGGAGGGGGAGGAGGAAAAAGCTAGGGTTTGGAGAGTTCGAGAAGTTGGGTAGGAGAGGGCGAGAGGGGGAAGGGGACGGGGGAGCGGGGAGCCTTTTGACTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0407000.1 | 8 | 10635321 | T | C |
| Osa08LNT0407000.1 | 8 | 10634614 | T | C |
| Osa08LNT0407000.1 | 8 | 10634762 | C | T |
| Osa08LNT0407000.1 | 8 | 10634844 | A | C |
| Osa08LNT0407000.1 | 8 | 10635007 | A | G |
| Osa08LNT0407000.1 | 8 | 10635382 | T | C |
| Osa08LNT0407000.1 | 8 | 10635544 | A | G |
| Osa08LNT0407000.1 | 8 | 10635647 | T | C |
| Osa08LNT0407000.1 | 8 | 10636107 | T | G |
| Osa08LNT0407000.1 | 8 | 10637029 | G | A |
| Osa08LNT0407000.1 | 8 | 10637225 | A | G |
| Osa08LNT0407000.1 | 8 | 10637595 | A | G |
| Osa08LNT0407000.1 | 8 | 10637688 | T | C |
| Osa08LNT0407000.1 | 8 | 10637835 | A | G |
| Osa08LNT0407000.1 | 8 | 10638633 | C | T |
| Osa08LNT0407000.1 | 8 | 10638746 | A | G |
| Osa08LNT0407000.1 | 8 | 10638841 | A | G |
| Osa08LNT0407000.1 | 8 | 10635211 | A | G |
| Osa08LNT0407000.1 | 8 | 10636665 | A | G |
| Osa08LNT0407000.1 | 8 | 10639205 | T | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa08LNT0407000.1 | DTM_#DNAt_MULE_japo_Os2766 | Chr8 | - | 10636129 | 10636865 | 736 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0407000.1 | osa-miR5542 | Cleavage | 4.5 | 15.459 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR5788 | Translation | 4.5 | 14.419 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR812q | Translation | 5.0 | 22.111 | 1 | 24 |
| Osa08LNT0407000.1 | osa-miR5179 | Cleavage | 3.5 | 23.458 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR415 | Cleavage | 5.0 | 18.914 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR415 | Cleavage | 5.0 | 17.422 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815a | Translation | 3.5 | 4.033 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815a | Translation | 4.5 | 4.314 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815b | Translation | 3.5 | 4.033 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815b | Translation | 4.5 | 4.314 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815b | Translation | 5.0 | 3.737 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815c | Translation | 3.5 | 4.033 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815c | Translation | 4.5 | 4.314 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR812n-5p | Cleavage | 5.0 | 17.699 | 1 | 24 |
| Osa08LNT0407000.1 | osa-miR5152-5p | Translation | 5.0 | 17.979 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR5497 | Translation | 4.0 | 21.38 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815a | Translation | 5.0 | 3.737 | 1 | 21 |
| Osa08LNT0407000.1 | osa-miR815c | Translation | 5.0 | 3.737 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0407000.1 | 8 | hd8 | Physiological trait | Flowering | RZ562 | RG978 |
| Osa08LNT0407000.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0407000.1 | 8 | hsa2(t) | Physiological trait | Sterility | nan | nan |
| Osa08LNT0407000.1 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Osa08LNT0407000.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RM72 | RM331 |
| Osa08LNT0407000.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)