© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0408000.1
GTACAAATCATAGAGGGTATTATTAAGTGGCAAAAATTCTCCACATGCTACAGCAATTACTACCAAACGAAGCTTTTGGTTAATTGCAGGCATAATTTAACCCCAATTGAATCGAATTTCTACAGATAGGATAGTAAAATAACATTACAACCGATCCGCAGGAAATGGGCAAAAAAAAAAAGATGGTGCCTTGACTAATGAACCGGATGCCAACTATACACTGCCAAATAATAATAATCCACTGCCCTCAACTCTGTCAAGACATTCATGACAGTCCATCCTCGCAGTGAGAATCGGCAAAATTCTCGGCTTATCTTGCAAAACGGTGACCCCGGAGGACATGAAGATCTTTATCACTCACTTGTTCTTTGCCTTTTAGAATTAGGTCCATCAACTGGATCACGGTTATGTTGATGTGAACTCCTGGAATGACTTGGACCAGCTCTTGCAGTATTCAAGTTCCCATGTGCAGCCTGTGAAGGGGTGCTGCTACTGACTGCTGAGGCACTTTGATGATGTGACTCAACTTGGGAAATAAATGGCATAATTTGGCGAACTAAGCTAGCGAACCGTAGACCCTCATCACTGACTCCTGACACTTCTGGTGCTCCATGATTTCTACCATCTACCTGCTCAGCAGAAGCCGGTGCATGCTGATTTGTGCCATTTACTCGAGAATTTTCCCCAGAAAAGAGTGATGCAATCCAAGGGATACTATCCATCAACTGAGAAAAAGGCCCCTGGCCATTCTGCTCCCCAGGGGAAGTCTGAGTGCCGTTTTCCGCATTGATATCAACAGGAGATCCTAGAGTACTCGTGCGGACATGGATGTCAATATCTCTTGGGTGCAGAACAGAGCGATGTGAAGTAAGACTAGAAAATATTGGGCCCACTTGAACAGATCCTGTTCCTGGAACAAAAGGAGCAGGTTGAACCATAAGAGGATTTGGTCCAGATGGAGAGATAAAAAGAGCTGGTCCAGAATTGACAACCGCTTCTGAAGTTGCAGGATTTATACGCAGCATCATTGTCGTGCGGCCAAGTTCTAGAAGTAATGAACCAAGGTATTGGATGAGAACTCCATATCTGACTACACTGTTTTGAAGGTTCCTCCGTGTTGTAGCATCAGTTACATTCACAATATCTCCTAGCTGGTTTGGTAGTTGAGATAGCAATGCTCCAGCATGCTCAACAAGAAGTTGTCTAGTAGAGTGCATAGTTTCAGCAAGCAATGCTGCAGTAGGAAGCCCATGCGCCGAAGCTGAATCAGGCTGGCTTTCATGATTTTGAGTACCACCTCCATGGGCACTTCCTGCAGTTCCATGGTCAGCATTATTCAGAGTTTGTCCTGTAAAGAGTATTGGAAGTAAATAACTAAATTTTCAGACTGATTCAGAATGTGGGCAACTCAGATAAAAGTCAAGGTAAGACCATTTTCGAGGAAGCCTTCCCTTCTAAAGGAGTCTCTCAAAAAGTTAATGTACTGAGAAATTGTGGTCAACGAATCAGGAATGACGTTTGGTTCTGATAACCCAACTGACGTTTCAGACTGGAAAAGTGGAGGAACCAGCATTTGATCAAGTACAGCCCTGACACCATTTTGCGTTGAAGATTGTGCACCTTCTGAAGGTCTGGCATCAGAAGGTGCTGGTCCACTCGAAACTTGTGTGCTACTAGGAGCTCGAAGCAGGCTTTGGAGCAACTGTGCAACACTGAGTTCACTCCCCTGACCCACATTAATAGCCTCAAGTACAATACTGCGAGTCATAGTGGGACCACGACGACGAGCAGGATTTGATGTGGTACCTTCATTTCCAGCATTTCCTGATGTAGCGGATTGTCCTGGTTGTCTAACCACGAGATGCAATGTATGGCCATCTTCCACGTGATACGCAGAGAGGAGTTCATCATCCTTTAGAACTCTCCCACGGCAAATCAGACGTTGTTGCTCAGACAATATTCCAGTTACAGTGGCAATTTTTTCCTTTAGCAGAGGCACTGGCACGCGTTTATTGACACGCAAATTGTATGTTTGAGAATCCAATGTCTTTATTTTGATCTCGATTGTACTCTCACTATTCAAGTCCTCAGCACAATGTGACATTTGAACATCTGAAGAACTACTCTCCATGATCTCCAGGATCCCCCTCCCCTCCCCTGCTCTGCTCGTCGGATGGAGATCGGCGCCCCTCCCCCTCCCCTGTTCAGCCGCGAGATGGCGCAAGGAGCGGAGGAGACGAGACGGGGAGATTTTTCTTTTACGCCAACAAGGGAAGGGGGGAGAAACTCGGGGGGCGCCTAATGCGCGCCTGGTTCGCTGCGGGCGCGCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0408000.1 | 8 | 11871129 | C | T |
| Osa08LNT0408000.1 | 8 | 11870038 | A | T |
| Osa08LNT0408000.1 | 8 | 11870313 | T | C |
| Osa08LNT0408000.1 | 8 | 11870945 | A | G |
| Osa08LNT0408000.1 | 8 | 11871789 | T | A |
| Osa08LNT0408000.1 | 8 | 11871792 | C | T |
| Osa08LNT0408000.1 | 8 | 11873085 | T | A |
| Osa08LNT0408000.1 | 8 | 11873700 | G | T |
| Osa08LNT0408000.1 | 8 | 11874211 | A | G |
| Osa08LNT0408000.1 | 8 | 11874747 | A | G |
| Osa08LNT0408000.1 | 8 | 11875472 | T | A |
| Osa08LNT0408000.1 | 8 | 11875874 | G | A |
| Osa08LNT0408000.1 | 8 | 11875914 | C | T |
| Osa08LNT0408000.1 | 8 | 11876551 | T | C |
| Osa08LNT0408000.1 | 8 | 11876970 | A | G |
| Osa08LNT0408000.1 | 8 | 11878252 | A | C |
| Osa08LNT0408000.1 | 8 | 11877801 | A | G |
| Osa08LNT0408000.1 | 8 | 11873811 | T | C |
| Osa08LNT0408000.1 | 8 | 11873713 | G | T |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa08LNT0408000.1 | DTM_#DNAt_MULE_japo_Os2081 | Chr8 | - | 11873482 | 11873863 | 381 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0408000.1 | osa-miR166a-3p | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166b-3p | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166c-5p | Cleavage | 5.0 | 16.574 | 1 | 20 |
| Osa08LNT0408000.1 | osa-miR166c-3p | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166d-3p | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166e-3p | Cleavage | 4.5 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166f | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR167a-3p | Translation | 4.5 | 22.518 | 1 | 22 |
| Osa08LNT0408000.1 | osa-miR159a.2 | Translation | 4.5 | 19.062 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR172c | Translation | 4.5 | 15.053 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166g-3p | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166h-3p | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166m | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR166j-3p | Cleavage | 5.0 | 20.321 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR1423-5p | Translation | 4.0 | 18.353 | 1 | 24 |
| Osa08LNT0408000.1 | osa-miR1428a-3p | Cleavage | 4.5 | 21.237 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR1850.2 | Translation | 4.0 | 22.4 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR1873 | Translation | 4.5 | 17.699 | 1 | 24 |
| Osa08LNT0408000.1 | osa-miR1877 | Translation | 5.0 | 13.235 | 1 | 24 |
| Osa08LNT0408000.1 | osa-miR2100-5p | Translation | 5.0 | 17.798 | 1 | 22 |
| Osa08LNT0408000.1 | osa-miR2864.2 | Translation | 4.0 | 10.257 | 1 | 21 |
| Osa08LNT0408000.1 | osa-miR2931 | Cleavage | 5.0 | 19.767 | 1 | 20 |
| Osa08LNT0408000.1 | osa-miR5146 | Translation | 4.5 | 17.154 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0408000.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RM72 | RM331 |
| Osa08LNT0408000.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Osa08LNT0408000.1 | 8 | hd8 | Physiological trait | Flowering | RZ562 | RG978 |
| Osa08LNT0408000.1 | 8 | hsa2(t) | Physiological trait | Sterility | nan | nan |
| Osa08LNT0408000.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0408000.1 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)