© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0408700.1
GCTATCGGTTTAGTAAGTAACTTCATATAACTATAGACATTCTAGTATAGATGGTACTGTACAAAACTGACTGCTAATCAGAAGCTAGTTATAAGAATCGTCTACTAATGAACATATAGCAGCATCCTTCTCTTTTTACTCTGTTCTCCAGGGCACTCCAAATCCAACATTGCGGATGAGTGACATTATACCCTAAATATTGATCCCACGGGTTGAAGTTCTCTTCCAACTACATGGCAACATGTGTAGTGCTTTTGGTAGATATATGAATAAGACCAGCATCCAGAGATGGCAGTTTCCTTTGTAACTGATGATAACAGAAGATCAAATATTATAAATGTCTTGACCAAATATTATAAATGTTTTTAACGCCTAGACTGTGCCCATTGATGGATGGTCTCAACCACTTGAGGGAAGAAAGCACTGATACTTTCGTTGATAAGACCCTGGAGAAAATGTATAGCATCCTCGTCGTCTAGATCCAACCGGAAATTTTGCTGTAGCTTAGAAGTCCCTTTGTCTGTGATACTCTCAATATTTGATCCAGTCATCAGATAAAAAAGATTCAGTATGAGGTTGCTGGACTTTCGTAATATGTTGTATGCCTCGCAACAGTAGGACTTGAATCTTGCATAGTATTCACTTTCAGTACCACCCATGGCCTCAACCATTTCTTTGCATAATTTCATCGGTGGTGATGGTGGTGCAAATCGATGTGGTTGTTCCCCAAGCATATACGAGAAGTCAACATGGAAAAGTCTTCCATCGTCTTGTAGGAGAAGGTTGTCAAGATGCCTGTCTCCAATCCCCAGTATGTATGTAATGACACTGTAGCCAGCACAACTTTTTATAAAAGTTTCCAAACATTGGGCAGTTATACCAAAAGGGCCATCTTCATCCGGATTACACTTTTGTAGGTAACTTTCTATACTGCCCGTTTTTTGTATAATCTTTGCAACAGAAATTGAAGGAATAAACTCAACCAACCCTTCTTCTAGACCAGTCGCAAGAACTTGATAAGGAGTAAGGTGTAAGTCTAGATTATCTGACTTGAGCAACCGATCCATCAAAGAGATTATTTGAATAACCAACTGATCCTTGCGGAGATTATCTCCCTTCTTGAAAATCATTTTCGATGTACCCCCATTCACAGTACTAAATGCTATACACAATGGATAATTAGCACTTTTGAATACCAATGACTCTTCAGGCACAATTCCGTCAAGGAGGACAGTCGGTGTTAATGGAGATGGAATTGGCTCACTGAAGTTTTTAAGCTCACTGAAAATTCCGGAGAATAACTGTTCTAATATCCTGCCTTTAGTTTGTGCGTCATGTTTGACATTTGATAGTTCCTTCATTATAGAACGTAACTGAGCAGTGAGTTCTGCCTGCTCTATCAAACTCTGCCACACTTGAAATCCATTTTCCTCCTTATGTACTGATCTCATTATAGCATCTTCAAGCATCTCATATGTACATAGATACCTTCTTGCATGAGAAGGATCATGAAGCTCAACAACTAAATACCAGCGAAGAAAGCTAGCAAGTTCGTAATTTGACAAAGCCCGATTCACAAGGAAGTGTGCTAGACGAGATCTGTCAGATCTTTCAAACCGCAGGCCTTGTACAAGTTGCAGCAAATAGCATTGCAGTTCTTCGTCGCTGGCCCTTTCAAACACGCCGACAGCATAAGCACGAACTTCCTCATTTTGAAAAACTGGTGAAAGAAGCCCCAATGCATCAGCCACATCAATAGATTCCCACCTTGGAATCAACGCAACAGCTTGTTTGGCTTCCTGGATGTCACTCCATTCCACAGAGAGGAGGAACTTTACAAGAGCTTTCTTCTCAGATGTCAAATAGAAACGAAATTTCCACAACAATTGCTTTTCATCCACATTTAAAGTGCGTGTGGGTGGATACTTGAGGATGTTTTGTATTAACTTTTGGTCAACTGAGCTTGGCTTCATCTCTCTATCATTTACTCCACGAGCCAAGCTCCAAGCAAGCACAGAGTGTTTATGCTCAGATGGATTGATTCGCCCAATCTCAGGATCACATGCAATAACAAGTTTATTCTTAGATATATCCACTAAGGATGAAGGGACTGATGTATGCAACTTTGCTCCATATTCCTGAAAGACAACTCTGTGTTCAAAGCTGCATAGTTCAACAATAAGGCTAGAATGCAAATTTTCAGTTCTCTCACTCTCTTTCTCAAGTTTATCAGCAGCATTTGCAATGAGATTGTCTAGCCAACCTATATGTGGTATCTGCCCTCTGATGTACTTGTTAGCAACCCTTTCCAACCTCTCTATTTCTTCCCTCTTGGTCTTGGGAACCTTGCCAGGGGTAGAGGTGGAGAGACTTCCATCTGCCATTTTATTGGGCCATACTCTCAGCCTCAGCCTCCCAGTTTTAAGTTGGTTTTTGCTATTGAAAAGAGATATAGTGGTTCCACCAACAATATAGATGTTGTCTTCACCAGATGACATATCCCACACCGTGAATGCAAGATGTGAGAAGGGCGTTAGGTCTCTGTATTTGGCACTTAATGTTACAAGCTCATTCCAGCAGTATGGTGATCCCAAAGATTTCAACCTTGTATTTGTGGACAATCCAAACTGTACTCCATCAATGTATAGTGTACACTCAACAAAGAGCACTGGAGCACTTCTTTCAATCAACAGGGTGCGATCTGGCACGAAGCGGTTGACGCGGAACGACAGCGGCAGGCTGATGTCCTGTGACAGGATGAACCGAAACTCTTTGCCGCCGCTGCAGGAGGAATGATCGGCGGTTCCGGTGGTGACACCCGCTTGGGCTTCGTCGGGCGCCGACGGCATGGTTCGCAGGAGCCGACCATAGGCGGAAGCAGCAGGACGACAACACCGTTGCTCGACTCACGTGGTGGATGGATATAGGCGCAGGCGGCGGGCGACTCTCGCGAGGAGATTGAGACCGACGCTACGGGAGATTGACTTGGGTGCAAGGAATCAGGCGAGAGTATGCGGCGGAAGCGGCAAAACGCCCGCACCGCTGCTTTACTTGCGATGATGGAGATCGGCGCGACGGCAGTGGCAGGCGACGGACGAAGGGGGTCTGGTGCCCGACCGACCGACGGATGTGGTGAGTCGAGGGAGGCCAAGGCCGTAAGCGGTATGCACGTGTTTGGTGCGGCCAATATTAATTCCTCGGGTAAGTAGGCCGACCGCGAGGCAGATTATGGGCCCAGCTGGAGAGCAGCTCCGATTAGGACTTGCAATAATCGGTCTTCAATTAGTCTTCTTGAACACTTCCGACGCACTCACGAACCTTCGAAACAATGGAAACGACAAGAAGGGGCGGCGCGACCACGGACGACGATGGGAAACGGCCGGCGACGAGGTCGGGTCAGCGGCGGGCTTCGGCTTGACGGCGTCGGCGGTGCTCCGGTGGGCTTCGGCGGAAACGGAGGGGTGGACGGGGTGCGGCTCCTCCTTGCGAACCCGGTGATAGCGACGGCGACCGGCGGCGACCACCACGGCGACGGCGCGAGGCGGCTGAAGCGGCTACGGAGCTAGGTTTGCGCGGCGACGGCGCTATAGGAGGCGGCTGCGGCTAAAACTCGGGCCAAACGGAAAAGCACGACTAGGGGATGCTATTTATAGGCTTGGATTAAGGAGATCGAACTCGGAACGAGAGGAATCGAAGCGGAAAATCCTATGTTTTAGTTGGAGAGATAAACTCTAAACGAGTTTGATTCTTATAAAATACAAGGAATTGGTTTCCGATTCTCGGGGGAAACGAAAGAGGGAGATAAGGGAAATATTTCCCCTCAACTAATTTTAAGAATAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0408700.1 | 8 | 12856294 | G | A |
| Osa08LNT0408700.1 | 8 | 12855194 | T | C |
| Osa08LNT0408700.1 | 8 | 12863483 | T | A |
| Osa08LNT0408700.1 | 8 | 12865187 | A | G |
| Osa08LNT0408700.1 | 8 | 12855306 | T | A |
| Osa08LNT0408700.1 | 8 | 12855770 | T | C |
| Osa08LNT0408700.1 | 8 | 12855817 | T | C |
| Osa08LNT0408700.1 | 8 | 12856113 | A | C |
| Osa08LNT0408700.1 | 8 | 12856258 | C | T |
| Osa08LNT0408700.1 | 8 | 12856616 | C | T |
| Osa08LNT0408700.1 | 8 | 12856736 | C | T |
| Osa08LNT0408700.1 | 8 | 12856882 | C | T |
| Osa08LNT0408700.1 | 8 | 12857012 | A | C |
| Osa08LNT0408700.1 | 8 | 12857451 | G | A |
| Osa08LNT0408700.1 | 8 | 12858103 | G | A |
| Osa08LNT0408700.1 | 8 | 12858752 | A | G |
| Osa08LNT0408700.1 | 8 | 12859480 | T | G |
| Osa08LNT0408700.1 | 8 | 12859534 | C | T |
| Osa08LNT0408700.1 | 8 | 12859924 | T | C |
| Osa08LNT0408700.1 | 8 | 12861076 | A | C |
| Osa08LNT0408700.1 | 8 | 12861658 | A | C |
| Osa08LNT0408700.1 | 8 | 12861723 | G | T |
| Osa08LNT0408700.1 | 8 | 12861853 | G | A |
| Osa08LNT0408700.1 | 8 | 12862288 | T | G |
| Osa08LNT0408700.1 | 8 | 12862412 | A | G |
| Osa08LNT0408700.1 | 8 | 12862970 | G | A |
| Osa08LNT0408700.1 | 8 | 12862976 | T | C |
| Osa08LNT0408700.1 | 8 | 12863304 | C | T |
| Osa08LNT0408700.1 | 8 | 12863380 | T | C |
| Osa08LNT0408700.1 | 8 | 12865690 | G | A |
| Osa08LNT0408700.1 | 8 | 12865806 | A | T |
| Osa08LNT0408700.1 | 8 | 12865977 | C | A |
| Osa08LNT0408700.1 | 8 | 12866028 | T | C |
| Osa08LNT0408700.1 | 8 | 12867177 | A | C |
| Osa08LNT0408700.1 | 8 | 12867189 | C | A |
| Osa08LNT0408700.1 | 8 | 12868207 | A | G |
| Osa08LNT0408700.1 | 8 | 12868256 | A | G |
| Osa08LNT0408700.1 | 8 | 12868764 | C | A |
| Osa08LNT0408700.1 | 8 | 12869003 | T | A |
| Osa08LNT0408700.1 | 8 | 12869226 | C | T |
| Osa08LNT0408700.1 | 8 | 12869383 | A | G |
| Osa08LNT0408700.1 | 8 | 12869540 | A | G |
| Osa08LNT0408700.1 | 8 | 12869813 | T | C |
| Osa08LNT0408700.1 | 8 | 12869970 | T | C |
| Osa08LNT0408700.1 | 8 | 12870566 | C | G |
| Osa08LNT0408700.1 | 8 | 12870607 | G | T |
| Osa08LNT0408700.1 | 8 | 12870740 | T | C |
| Osa08LNT0408700.1 | 8 | 12871055 | A | T |
| Osa08LNT0408700.1 | 8 | 12871120 | C | T |
| Osa08LNT0408700.1 | 8 | 12871285 | C | T |
| Osa08LNT0408700.1 | 8 | 12871495 | G | A |
| Osa08LNT0408700.1 | 8 | 12874335 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0408700.1 | osa-miR5534a | Cleavage | 4.5 | 16.776 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR5542 | Translation | 5.0 | 10.484 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR5820 | Translation | 3.0 | 16.548 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR5827 | Cleavage | 3.0 | 17.687 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR5835 | Cleavage | 5.0 | 15.262 | 1 | 24 |
| Osa08LNT0408700.1 | osa-miR6255 | Cleavage | 5.0 | 19.803 | 1 | 22 |
| Osa08LNT0408700.1 | osa-miR160b-3p | Cleavage | 4.5 | 20.047 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR160c-3p | Cleavage | 4.5 | 20.047 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR395t | Cleavage | 5.0 | 16.187 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR160f-3p | Cleavage | 5.0 | 21.758 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR437 | Translation | 5.0 | 18.205 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR440 | Cleavage | 5.0 | 19.333 | 1 | 24 |
| Osa08LNT0408700.1 | osa-miR1425-5p | Translation | 4.0 | 13.665 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR1850.2 | Translation | 4.5 | 16.286 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR1865-3p | Translation | 5.0 | 17.357 | 1 | 24 |
| Osa08LNT0408700.1 | osa-miR2868 | Cleavage | 5.0 | 13.337 | 1 | 20 |
| Osa08LNT0408700.1 | osa-miR812o-3p | Cleavage | 3.0 | 16.75 | 1 | 24 |
| Osa08LNT0408700.1 | osa-miR5500 | Cleavage | 3.0 | 21.757 | 1 | 22 |
| Osa08LNT0408700.1 | osa-miR5504 | Cleavage | 4.5 | 14.719 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR160a-3p | Cleavage | 4.5 | 20.047 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR319a-3p | Cleavage | 4.5 | 13.937 | 1 | 21 |
| Osa08LNT0408700.1 | osa-miR160f-3p | Cleavage | 5.0 | 20.047 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0408700.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Osa08LNT0408700.1 | 8 | hd8 | Physiological trait | Flowering | RZ562 | RG978 |
| Osa08LNT0408700.1 | 8 | hsa2(t) | Physiological trait | Sterility | nan | nan |
| Osa08LNT0408700.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0408700.1 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)