© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0411900.1
GGGATTTCTTTCTAGAGAACACAGCTCCACAGCCTGATTGTACCGGGGAAAAAATTGAAGCCGGACAGATACAGAGGTAAATATTAACAGGGAGGGGAAAAATGTAGAAAGGTGAGCCGATACGGTGAACATATCATATAAATTTTTTTCCCAACATGAAATTTTAAAAGTTATTAAAGACAATGGAATTGCACCGTAGCGTTTAGCACGGGCATATTACTAGTATACATAGTGCTAAAACGTATAACAGGCAAGCACCAGGTATTTGACAAAGAACATGGCATATGCAGGAAAGTGTAGTTACTTTATACCTGGTATGAAATTGTAATAATATGCTAATCAAATACGTTGGCACGCCATGTTCTTTGTCAACTGAAATTGTAATCATGAGTGCCCTTTGGGTGCTAAAGATCATGAGAAGCAGATGGGTAACTAGCTAATAAAAATCTTGCTCAGAAAAAGATATGCAATACTACTTCCTTGTCAAATGCCATCACCACTAGCACGTTCTGTTCAATCCTGTCAATTCAGCCGTTCCATGGATTCATGAACTCTGATAGTAGGGAAAAAGGGCAATTCGACTGATTACGTTGGAAGATGAACAGAACCGCTCATGTCGTCACCGAGAGTTTACATGGCAAGGCAGTGGGAAAATGTAGTACCCAAGAAAGGGCCCAAATCAATTTATACCAGAGTTGCCAATCAAGTTGTGATAGCGCCACTGGAGGTATCGTCAGGTTTGCCCATGCACTCAGCACTTGTCGACGCCATTGTGCAAAGGGCTCTTCTGCCCCATAAGTTTCCAAATGCCAGCATTGCCGATTTTGGTCCGAGCAAGGATCAGACGTCCAGAGCGGTAGTGCTTGCCGCCTTGCTGGAGAACTGAGGGATTGTTTGTCTGATCCTGGTTACCTTCGCAACCCTTGTTATGGAGGAATTGTTACCGTGGTCGGCAAAGGCTTGTTCGCTGCAATTTGTTGATGCCAAAGAGAGCTTCAGTTCTTGCAATTTTCCGCAGGTCGCAAGCTTACAAAGGTAGTCACGGAAATTTGTCAATACACGCTTCTCTTGCTCTTTGAAAATGTCTACCAGATTCTCTTCTGTGGTTGAGGGGGTTGCATCTGGAGCTTTTGAATCCTGGAAAACTGCATCTTGCTCATCACACATCAGTGCCTGGGTTCCAGGAGACAGAGGCCTCTTGTTACCCTTCTGTATATCAAAAGGGTCGGCTCTTGGCAATTCCAGCCTACCTTCAGCAATAAGAACTTCGTTTGAGCTCTTCTCCAGTGAACACATTTGTTTAGCTGGTTCTTTCTGAATTGCTTCTCTATCATGGTTTGTGGAAGAAAGGCAACTATCTACTCGATTTAACTTTTTTCTCTTGGTGTTTTCCTTCATTCCTGACTCTAAAAGTGTTGCGCCAGCTTGTCTTGACACTAGAATTAAAAGATTACAGAGCTCATTTACATCTTCTATCTGGATGATGTCTGCTAAACTTGGCCTGTAAGTAACTTCATGTGGTACATATTTTACGAGACTTTTAGCATCTTCTCTAGTAACAGAAGAAGTGAGTGAACACGAAAGAGCATGTGAAGTGTTGTTGTTAATGGAATGATCGCTCACAGATGCAGCCAATGAAAGACTGGAGTCATTTTCTGCTGCATGGAAAATTATCACAGATTGTCCAACCATCCCACTTGAAGCAGGATTCTGCACATGATGCGCATGAACAGTGTTCTTCTGGGAAATTCTATCTGCATTACTCTTGTAATTCTTGCAACCCGTACATCTGCAGTTCTCTGAACAGAAAACACTAGCTTTGAAGCATTCACAGTATTTCTTCAGACACTCTGTTCTCTTGCATTTACACCCCTTTGTATGTTTACCCACAATATCACCCTCTGCTGCTTTGCTCTCACAGTTGTGGGCTGTGCTATTCAAAACTTTTGGCATAAAAGCTGCAGGATTCCGTTCCAATGCAACATTGATAGCATCCTGTCTTGCATTCTCATGATTAACATTGTTGCAACAGTTTGTGCAATTGCAACCAATGCAGTATCTGCCTTTTTCAAAGCACTCACAATACGCAGCAATTGGAGGAAATTTATTATGGAACCTACAGCTTCAGGCATTTCGAATACTTGCAGCTGCAGTTTGTTTTCCTTGTCAGTGTCACATCTTTTGTTTCAGACCACATTTCGCTAGATGGCTTTTGAGAACTCAGCATCCATGTGAAACATATTCATTATCTGTTCTCCTAATTTTCTCAATTAATCCAAGAAACTCATATATGCATTAGTGCAAACAATGGCAAACAGTGAATTATAAAACTTTAAAGGTATGCATCATACTATCACAAATATGAAGTTATCAATTTCAATTTCTTCAACAAAGCATTCCATCTCACTATTCCAAGAAATGGAGAACTCACACGTCAATAAAGGTTGCAGGCCTTGGCAACAATGGCCTCTCCATCTTCGGTGAATCTTGCTTCAGCGCTGGGGATACATGTTGCGGTGACCGCCGCACCTGCAACTTTGTGGGCTTTTCAACTGGCAATACCTCTAACTTTGGAAAATCTTGTGGCAGCATGGATGAAGACTGCTGCACTTGCAGCTTCTTGGCCGGAGGTGGGCTAGGCAATGACATAGGACGCTTCTGGGCAAATGTTGAAGGGCATATCACTGGAGGCCATAGTGGCAGTGATGAATTTACTTTTGCCAGTGGGAGCTGATAGCAGGGAGGTGTTCGGGGCGGCCCAAGCGCATGCAAGAGCGCTGCCGCGGTAGCAGCGATATCTGCCTTGCCAGCATACGAGGCAGAGGCAAAATCTATCTTCACTGACCCTGGACAAAGCTGTAACGGCTTCTCCATTTCCCACCACTTCCTAGATCCCACTCTGGTGCCAAATTAAACACCAGGATACCGCGGAAGCAGCCGGACAACCGACGCGCGCCCCTACTCGCTCGCGGGATGGATGGGGATCGGTGCAGGTGGTGGCGGCGGCGGCGGCGGACGAACTCACGAGGAGTCGGCGTCGCCGCCGAGAGGAAGAAGGGGAAACACCGCCGCACGACTATTTCCTTTTTTTCTTTTTTTAAACAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0411900.1 | 8 | 17214121 | T | C |
| Osa08LNT0411900.1 | 8 | 17214764 | T | G |
| Osa08LNT0411900.1 | 8 | 17214874 | T | C |
| Osa08LNT0411900.1 | 8 | 17214705 | T | A |
| Osa08LNT0411900.1 | 8 | 17217397 | T | C |
| Osa08LNT0411900.1 | 8 | 17214017 | G | A |
| Osa08LNT0411900.1 | 8 | 17214048 | A | G |
| Osa08LNT0411900.1 | 8 | 17214145 | T | A |
| Osa08LNT0411900.1 | 8 | 17214184 | T | C |
| Osa08LNT0411900.1 | 8 | 17214508 | G | A |
| Osa08LNT0411900.1 | 8 | 17214587 | A | G |
| Osa08LNT0411900.1 | 8 | 17215071 | T | C |
| Osa08LNT0411900.1 | 8 | 17215135 | A | G |
| Osa08LNT0411900.1 | 8 | 17215309 | T | C |
| Osa08LNT0411900.1 | 8 | 17215382 | G | A |
| Osa08LNT0411900.1 | 8 | 17215721 | G | A |
| Osa08LNT0411900.1 | 8 | 17215901 | T | C |
| Osa08LNT0411900.1 | 8 | 17216045 | A | C |
| Osa08LNT0411900.1 | 8 | 17216090 | A | G |
| Osa08LNT0411900.1 | 8 | 17216266 | C | T |
| Osa08LNT0411900.1 | 8 | 17216311 | T | A |
| Osa08LNT0411900.1 | 8 | 17216760 | A | G |
| Osa08LNT0411900.1 | 8 | 17217413 | T | C |
| Osa08LNT0411900.1 | 8 | 17217594 | G | C |
| Osa08LNT0411900.1 | 8 | 17218333 | T | C |
| Osa08LNT0411900.1 | 8 | 17218622 | A | G |
| Osa08LNT0411900.1 | 8 | 17218667 | A | G |
| Osa08LNT0411900.1 | 8 | 17218917 | A | G |
| Osa08LNT0411900.1 | 8 | 17219447 | A | G |
| Osa08LNT0411900.1 | 8 | 17219456 | A | T |
| Osa08LNT0411900.1 | 8 | 17219552 | A | T |
| Osa08LNT0411900.1 | 8 | 17219731 | A | G |
| Osa08LNT0411900.1 | 8 | 17219961 | A | G |
| Osa08LNT0411900.1 | 8 | 17220095 | G | A |
| Osa08LNT0411900.1 | 8 | 17220498 | C | T |
| Osa08LNT0411900.1 | 8 | 17220500 | T | C |
| Osa08LNT0411900.1 | 8 | 17220525 | A | G |
| Osa08LNT0411900.1 | 8 | 17220708 | G | A |
| Osa08LNT0411900.1 | 8 | 17220804 | C | A |
| Osa08LNT0411900.1 | 8 | 17220996 | T | C |
| Osa08LNT0411900.1 | 8 | 17221026 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0411900.1 | osa-miR5143b | Cleavage | 5.0 | 18.938 | 1 | 24 |
| Osa08LNT0411900.1 | osa-miR166a-5p | Cleavage | 4.0 | 10.01 | 1 | 21 |
| Osa08LNT0411900.1 | osa-miR166e-5p | Cleavage | 4.0 | 10.01 | 1 | 21 |
| Osa08LNT0411900.1 | osa-miR408-5p | Cleavage | 3.5 | 8.678 | 1 | 21 |
| Osa08LNT0411900.1 | osa-miR1423-3p | Translation | 4.5 | 19.605 | 1 | 21 |
| Osa08LNT0411900.1 | osa-miR169r-3p | Translation | 4.5 | 12.229 | 1 | 21 |
| Osa08LNT0411900.1 | osa-miR1438 | Cleavage | 4.5 | 21.672 | 1 | 22 |
| Osa08LNT0411900.1 | osa-miR2876-3p | Translation | 3.0 | 16.977 | 1 | 21 |
| Osa08LNT0411900.1 | osa-miR5144-3p | Translation | 4.0 | 19.65 | 1 | 21 |
| Osa08LNT0411900.1 | osa-miR1875 | Translation | 5.0 | 9.411 | 1 | 24 |
| Osa08LNT0411900.1 | osa-miR5143a | Cleavage | 5.0 | 18.938 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0411900.1 | 8 | hd8 | Physiological trait | Flowering | RZ562 | RG978 |
| Osa08LNT0411900.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0411900.1 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Osa08LNT0411900.1 | 8 | qCRE-8 | Resistance or Tolerance | Other soil stress tolerance | R727 | C347 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)