© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0038000.2
CCTCGTTCATACCATCCCAACCCAAATTGCACAATCTGACAAAATATATCAGCCACATTGCACCATAATAACAAGTATATAACGCAATTCAACGGAACATTTCTTAGAACTAAAATAGTATAGGCTTCAAATATTGTTTTCTGCATTTCTACATAGCACGTCTAGTAGCAAGCATGGCTGGCCTTAACATTGGTCTTTGCTGCCATTAAATACATAAATAACCCCATCTTTCTTGAGTCCAGTTTCATGTAACAAAAGCAAAAAGGCAACATCAGTTCTGTTTTTTCTTTGGAGTCAATTTCTTCTTGGTTGGTGGTAGTGGCTGTGATGGTGTTGCTTCAGTCATAGCCAAGCGCCTCCTTGTCACTGGTCCAGGTGAATCTTGTGAGCATCCTTCTCTAGCAATAGTTGGTGTTCCAGTTGTCCTTGTTTGACTCCTAGTGACTCGAGCAGGGCTATCAACTAATTGAACTCTAGCAACCTTTGATCTTGTTGGAGTTTCAACAATTTCCTTAGCAGTTTTCTTTTTCCTAGCTTTTGTAGCAATATTCTTTGCCTTCCTCTTCCTCTTTTTGGTCCCATTAAGAGGACACTTTTGGCTGCTCTGTCTATGCCCTAGCCCACCACATCTTGGGCATTTCACCTGCCTTCTGATCTTTCCTTTCCCCTTCTCAAGACAAGAAGGAATCATGTTTTTCCTTTGCCTAGGAACAGTTCTAGGCTTGGGCACTGGTGGCTGCAACTTAAAATCTTTGTTCGCTGTTGGCCATTGGGACTTGTCAGTTATGCAGGGGATGACACCTTCATATGCAGCCCTAAAGCAACTAACAGAGAAAACGGGATCAACAAAATCATCCATGATTGGATTCCTTTGTTTGGAGATAGCTGCAAGAGCATGAGAGAATGGCTTCCCTGTTAACTGCCACTCCCTACATGTGCATTTCTGTTGGTCAAGATACACAACATGCCTATAGACTTCAACACTATTATGGAGCTCAGTCACTTCAGCTGTATCATCCGCTCCCTTCATGACTCTCATGTTGGCTAAACCTCTAGTTGCTGCCTTTAGTTGTGTGACAATTGCAGGTAAAATGTTTCTGCCTTCTAGTTTTTCTCCAATCTTCCTTCTCTTAGCCCACAAGGCTGCTGTCTTCTCTCTGATTGCATCTGCTAGGGCATCAACTTGCAGTTCCTTGAATTCTTTGATCCATGCATTCCATGACTCAGCCACATTATTAGTGATGAAGTCACATTTGATCTTTGGTGAGAACTTGCTCCTTGCCCACAGAATTTTATGATGTTTGTATAACCAATCACCAACATCAGGATCAGCTGATAAAACCTTATCCATGTGATAGTCATAGATCTCAGACCTAAAAGCTCTAGCAGCTGGCCACAAGTTACCATAAACTGTACCAGTTTTCCTCTTTGTCAAGTTTTCCATCAAGTGCCTAAAGCACTCCCTCTCCTCACAGTTAGGAAAAACCCTCTCAACTACATTTTCTAGGCCCTTGCAAGCATCTGTACATATTGCCAGGTCTTCCACATGTCCAATACACACTGCAAGTTGCTCCATGAACCAAGTCCAGTTATCAGTGGTTTCTGCATCAAAGAACCCAAATGCCATTGGGTACATCCAATTATGCCCATCTAAGGCATTTGATGCTGCCAAGTGGCCATTCCACTTCCCATTGAGGGCCGTAGAATCAATGCTAAGGTATTTTCTGCATCCTAACAAGAAACCTGTGATGCAAGGCTCAAAGCAACAAAAGAACCTCTCAAAGTGAACTTGACCATTTACTTCCTTGGTACCAATTTCAACTCGACTGCCAGGACACCTCAACTCTATCTCAGCCTTAAAGTTATACAAGGAATCAAAGCTATCATCCCATGAACTCCCAAATCTTTTGTATGGCCCTCTCTTTACCCTTCCAAACAGTGGAGTAAGGAATCTGTACCTTGTACCGCTCCTCTAATATGGTCTTTAGCTCCTTGGCCCCACAATTTGGCTTCTTCCTCATAATTGCAGCAGCTCTATCTGCTACCCAAGCTTGTGATGCCATTCTTCCAAGAACCCTGCTAGTAGAGGAACAATCATGCTTTCCTGCATTTATTTGCACCCTAACAGTCTTATCATGTTGAGTTCTGCCAACAATCCTCCATTGACAACCATCTGCTGTACAGAATCCCCTAAACCTGGTAGGGTCAGACTTCTCAGTGCCAAGCTCAAATTCTTCATTGATGGCATATTGCCTGACAGCCATTTTGGGTAAATAGTGTCTACATTCATGATTGGGTCATCTCTGTCCCAGTCCCTGTTTGGCTCAACACCCACATCATCATTCACAGGAATAGCTGCTTCTGTCATTCCTTGCTCTAGGTCAACTGGTGGAAACTGACTAGTTGTTGCCTCATCTGCTCCAATATCAGAACCACCTAGTCCCAGCATGTCAAACATCTCATCCTCATCAAATGTAACATGACAGGATCCACCTTCAACTGTCAATGGCTGGATGTTTAGTTCATCCCAATCAATACCACCATGAGCAACAACACTAGGAGCATCAACATTATAAGCACCGACAGCACCAGGAGCAACAACATTGTAAGGACCAGCAGCATGAGTAGCAGGAGCAGGAGGATCATCATTCACTACAGAGCCAGAATCAATAGCAGCTATAGCAGTATTGGAGCCATCTAAAGTGTCTGATTTGTCCATTATATTAACAAGCAAGTTCATCACCTTGGTATCAAATCTATCAATGAATTGAGAAATGAGCACCAAATTGCTTGAAATCTCAATAGTTTCACATGTCCTATGGTCAGTTCCATAGAAAATAGGTTTCTGCCTACTACCCCAGATGACTTGGCTCTTTAAATCCTCAACCATACGGTCCATGCTAACTACACCATTCACCCACCATGAGTGCTCTTGCCCCTCCATTGGCAGCTCTGACCCATCATCCATCTTAGCATCATATGGGGGGATTCTAACGTTTATACTAAACGCAGTATGACGATCAAACCCCGGCGGGCACTCAGATGGAGCCATAACCCCCAAAATCCAAACCCTAGACAATCCAATCTCGTTGGCTGTCGCAGCTCCGTCGCCGGTGAATCGACAGCGCCGCTGCCGCCGCCGCAGGAGTGAGACCAGGTCGACTGAAAACGAGAGAAGAGAGGGATCTGTGGTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0038000.2 | 1 | 31672888 | A | G |
| Osa01LNT0038000.2 | 1 | 31672210 | A | G |
| Osa01LNT0038000.2 | 1 | 31672506 | C | T |
| Osa01LNT0038000.2 | 1 | 31672748 | C | T |
| Osa01LNT0038000.2 | 1 | 31673236 | A | G |
| Osa01LNT0038000.2 | 1 | 31673304 | A | G |
| Osa01LNT0038000.2 | 1 | 31673597 | A | G |
| Osa01LNT0038000.2 | 1 | 31673747 | A | G |
| Osa01LNT0038000.2 | 1 | 31673752 | A | C |
| Osa01LNT0038000.2 | 1 | 31674622 | T | C |
| Osa01LNT0038000.2 | 1 | 31674700 | T | G |
| Osa01LNT0038000.2 | 1 | 31674705 | G | T |
| Osa01LNT0038000.2 | 1 | 31674755 | G | C |
| Osa01LNT0038000.2 | 1 | 31674955 | C | T |
| Osa01LNT0038000.2 | 1 | 31675024 | T | C |
| Osa01LNT0038000.2 | 1 | 31675333 | A | G |
| Osa01LNT0038000.2 | 1 | 31675510 | C | G |
| Osa01LNT0038000.2 | 1 | 31675542 | T | A |
| Osa01LNT0038000.2 | 1 | 31675647 | C | T |
| Osa01LNT0038000.2 | 1 | 31675799 | T | C |
| Osa01LNT0038000.2 | 1 | 31676127 | T | C |
| Osa01LNT0038000.2 | 1 | 31676290 | T | C |
| Osa01LNT0038000.2 | 1 | 31674587 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0038000.2 | osa-miR5532 | Translation | 3.5 | 14.662 | 1 | 22 |
| Osa01LNT0038000.2 | osa-miR5804 | Cleavage | 4.5 | 10.906 | 1 | 21 |
| Osa01LNT0038000.2 | osa-miR5812 | Cleavage | 4.0 | 23.302 | 1 | 24 |
| Osa01LNT0038000.2 | osa-miR169d | Translation | 4.0 | 19.855 | 1 | 21 |
| Osa01LNT0038000.2 | osa-miR169n | Translation | 4.5 | 19.855 | 1 | 21 |
| Osa01LNT0038000.2 | osa-miR169o | Translation | 4.5 | 19.855 | 1 | 21 |
| Osa01LNT0038000.2 | osa-miR416 | Translation | 4.0 | 11.451 | 1 | 21 |
| Osa01LNT0038000.2 | osa-miR444a-5p | Cleavage | 3.5 | 19.139 | 1 | 21 |
| Osa01LNT0038000.2 | osa-miR528-5p | Translation | 4.5 | 15.63 | 1 | 21 |
| Osa01LNT0038000.2 | osa-miR1862a | Translation | 4.0 | 13.872 | 1 | 24 |
| Osa01LNT0038000.2 | osa-miR1862a | Cleavage | 5.0 | 7.826 | 1 | 24 |
| Osa01LNT0038000.2 | osa-miR1862b | Translation | 4.0 | 13.872 | 1 | 24 |
| Osa01LNT0038000.2 | osa-miR1862b | Cleavage | 5.0 | 7.826 | 1 | 24 |
| Osa01LNT0038000.2 | osa-miR1862c | Translation | 4.0 | 13.872 | 1 | 24 |
| Osa01LNT0038000.2 | osa-miR1862c | Cleavage | 5.0 | 7.826 | 1 | 24 |
| Osa01LNT0038000.2 | osa-miR2919 | Cleavage | 3.5 | 10.058 | 1 | 19 |
| Osa01LNT0038000.2 | osa-miR2919 | Cleavage | 5.0 | 15.756 | 1 | 19 |
| Osa01LNT0038000.2 | osa-miR2919 | Translation | 4.5 | 9.022 | 1 | 19 |
| Osa01LNT0038000.2 | osa-miR1862f | Cleavage | 3.5 | 7.826 | 1 | 20 |
| Osa01LNT0038000.2 | osa-miR1862f | Translation | 4.5 | 13.872 | 1 | 20 |
| Osa01LNT0038000.2 | osa-miR1862g | Cleavage | 3.5 | 7.826 | 1 | 20 |
| Osa01LNT0038000.2 | osa-miR1862g | Translation | 4.5 | 13.872 | 1 | 20 |
| Osa01LNT0038000.2 | osa-miR812n-5p | Cleavage | 5.0 | 23.855 | 1 | 24 |
| Osa01LNT0038000.2 | osa-miR5489 | Translation | 4.5 | 17.022 | 1 | 21 |
| Osa01LNT0038000.2 | osa-miR5489 | Translation | 5.0 | 11.947 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0038000.2 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0038000.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0038000.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0038000.2 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0038000.2 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0038000.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)