© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0413800.1
CGGGGACTCTTTTACATGTGCGTTGTTGTGGAAAAAAAATCCAAATCCAAATTCATAGAACATCAAATTTGCCTATATTTGACTCGGATGCTCAGTTCAGAGAGAAGAAAAAACAGGAGCATCAAATCAAAAATACATATAGGATAATAAGCTCCTTTTGGAGAGCAAGATTGGTAGCAAACCAATTAAACCGACGCAAAAGACAAATCAGACCAAAGCCGCTCAGATGGATGGACGAGCGCCGCAACGACGAACAGTGAAGGTGAAGGCTTGACCGGCAAAACAGCTCAGGTCTCATTTGTGTGATTCATGCAAAAGATGTTACATTCCATGGCTTGCAACAAGTAGAAGGTGCTTTGTAAAGCCCTGTCGACCAAGCTTCAGGCCCGACCAAACATGTCTTCTTCAAGATACATAAACCATAACGATATAACTCCAGCATATCATGCATGGGGCTGCAGCCCTCGAGCCTCATCACAGAAATGCAATTGAGTCAACCTAAATGCTCAGGAAATTCAAGACGCCTTTCCTGCAAAGCTCCGGGGGAGTGCCGACAGTTCAGGGAAAATTAACCTCTCTTCTCCTGACCCCCCGAGCTACGATGATACTGCTTTACTCTGCGATTCTAACCTTCTTGTTCTTCTTCTTGGATTTCTCCCCTGGCGTCTGAGGAACCTCCAAGGTCGTGCCACTGTCGCCACCACGAACCTGGGATCCTTCAGCCGACTTGCCCGATACATTCGAGTGCCCCAAACTGCTCTCATCCTTTCTCTTCTGATTGTGTTTGTGCGCGGGCTCGGCACTCTGTTGGCCCAGCGATAGCGCTGAGCCTTGGCTGCTGCGGTTCTTCGACCCGCTAGAGAACCGAGACCTCGTCTTCTTTGAAGAACCTGCAGACTTCTTACTGCTAGGAGTGAGACTCCCCAAACCTGGCTTCTCCGGTTCTTCAGGGTCAGGATAACGAACTAAGCTAACTCGACGTGCAATCTTCCCAACAGCTTTTGCTTCTGGTCCGGATGGAAGGAAAACAGTTGCATCTGGTTGCTGAGCAGCAAAGCTAACAAGATCATAAGATTTCCCTGAGGAACTATCCAAACTGCTCAATTTTCCATCACGGTGCAACTTAAGAGTAACCTCTTGACCATGAAAATCAGACGCATCTAACTGATTTAGAGGCCACTGTATTAGCCAAAGTTCTGTTGACTCTGTTTGTGATATATCAAGCATAGCCTCTTCGCTGTTCTCCTCAAATGCCGGTCCAGGCTCATAGCTTGCATCGTAGCTTACGCGGGGGGAGGCCGAAGCCATGGTCGGCCGATGGCGGATGGCGTGCTCCCGGCGGCGCGGCGACAGAGGCTCCCGGCGGATGGCGTCCTCCCGGCGACGGCGGCTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0413800.1 | 8 | 20249555 | A | C |
| Osa08LNT0413800.1 | 8 | 20253717 | C | T |
| Osa08LNT0413800.1 | 8 | 20254336 | T | C |
| Osa08LNT0413800.1 | 8 | 20248866 | A | G |
| Osa08LNT0413800.1 | 8 | 20249409 | T | C |
| Osa08LNT0413800.1 | 8 | 20249784 | T | C |
| Osa08LNT0413800.1 | 8 | 20250119 | T | A |
| Osa08LNT0413800.1 | 8 | 20250199 | C | A |
| Osa08LNT0413800.1 | 8 | 20251677 | T | A |
| Osa08LNT0413800.1 | 8 | 20252024 | C | T |
| Osa08LNT0413800.1 | 8 | 20252254 | C | T |
| Osa08LNT0413800.1 | 8 | 20252512 | A | G |
| Osa08LNT0413800.1 | 8 | 20252556 | T | C |
| Osa08LNT0413800.1 | 8 | 20252766 | A | G |
| Osa08LNT0413800.1 | 8 | 20253117 | T | C |
| Osa08LNT0413800.1 | 8 | 20253129 | T | C |
| Osa08LNT0413800.1 | 8 | 20253149 | T | C |
| Osa08LNT0413800.1 | 8 | 20253324 | A | G |
| Osa08LNT0413800.1 | 8 | 20253498 | A | G |
| Osa08LNT0413800.1 | 8 | 20253678 | C | T |
| Osa08LNT0413800.1 | 8 | 20253764 | A | C |
| Osa08LNT0413800.1 | 8 | 20253954 | T | A |
| Osa08LNT0413800.1 | 8 | 20250235 | G | A |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa08LNT0413800.1 | DTM_#DNAt_MULE_japo_Os0229 | Chr8 | - | 20250209 | 20250710 | 501 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0413800.1 | osa-miR5541 | Translation | 4.5 | 15.128 | 1 | 21 |
| Osa08LNT0413800.1 | osa-miR393b-5p | Translation | 5.0 | 18.523 | 1 | 22 |
| Osa08LNT0413800.1 | osa-miR1438 | Cleavage | 3.5 | 17.598 | 1 | 22 |
| Osa08LNT0413800.1 | osa-miR1855 | Translation | 5.0 | 22.684 | 1 | 21 |
| Osa08LNT0413800.1 | osa-miR2863b | Cleavage | 4.5 | 16.905 | 1 | 21 |
| Osa08LNT0413800.1 | osa-miR1863c | Cleavage | 4.5 | 13.816 | 1 | 24 |
| Osa08LNT0413800.1 | osa-miR5517 | Cleavage | 5.0 | 11.954 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0413800.1 | 8 | nan | Physiological trait | Source activity | R727 | R202 |
| Osa08LNT0413800.1 | 8 | QalRr8.1 | Resistance or Tolerance | Other stress resistance | RG28 | RM223 |
| Osa08LNT0413800.1 | 8 | QalSr8.1 | Resistance or Tolerance | Other stress resistance | RG28 | RM223 |
| Osa08LNT0413800.1 | 8 | Aroma | Physiological trait | Eating quality | RG28 | RG1 |
| Osa08LNT0413800.1 | 8 | qMRLw8 | Resistance or Tolerance | Other soil stress tolerance | RM223 | R727 |
| Osa08LNT0413800.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RG978 | RZ66 |
| Osa08LNT0413800.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)