© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0414600.1
CCTCCTTGTTTATTCATCACTCAGCTCATACATCTCAGAGATCATTTTAACATTAGCCTTGTCTTATTGCACGAAAAGTACTCGGTAGTATTATCTGTACCAGCTCCGGGATTTGGCTTTAAAAAACCAAGAGGCGATCGATTACTCGTCTGCCTCCGTCCATGTCGCGATGGCCAGCGTGTGCCTCCCGCCGCAGGCGACGTACCTCGCCTGCCATTGCCCGCCGGAGTCGCCGCCGCTGGTTCCCGGCGGCGGCAGGTCGATGGGGACTTCCATCGGGTGGCCCGTCGTGACCTTCCTGCCGTAGCCCAGACGGCCATGGTCACCTCTACCGTAAAAGTTAAGCTCTCAGGATCCTCAATAATCTTTGCAAAAGTTTGCAGGAATGCTGCCAGATCAGCACCGTATACAATTCTGTGATCAGCAGTGACATTAACCAGCATTTTGCTCTTGACACTAAAGAAACCATCTTTATCAGCCACCACTGTAGGTTTTGAGGCTCCGACAGCCATTATGCCTCCCTGGCCAGGTGGAAGAATTGCATCAAATCTATCAACACCAAACATACCCAAGTTTGACAGTGTAAATGTCCCAGAGCTGTACTCATTTGGTTGGAGCTGTTTTGCACGAGCTTTCTTGACTAGTTCCTTCCATTTTTGTGAGAGCAAATATATATCCAACTTATCAGCATCCTCCAGAACAGGTGTAATGAGCCCACCATCGATTGCGACAGCCACCGCGATGTTGATGTTGGTGTTGTAAGTGAAGCTCTTCCCATCCCTGCAGCTAGCATTCACCACCGGGTGCTGCGCAAGTGCCATAGCTGCGGCCTTCGCCAGCAGAACTGTCATGGTCACCCCCTTTGACTTGACCTTCTCATATAGCTCATCGAGCTTATCGGTCACAATTGGGTATCCCACACGGAATGCGGGCACCGCGAGGCTCTCCACCATGTTCTTGCTCACTGCAGCCTGCATGCCAGTGAATGGAACCACCGTGGCACCGGGCACCGGAGGAAGCTCCGCGGCCTGTGGCACGGCGCCAATTGCCGGAGCAGACAGCGGCACGGGAGCAGCAGAAGCAGCAGGCACAACCTTCGGCTTCGGCTCGATGCCGGCGGCAGCCTCAACATCGGCCGGCGTAATTCGCCCGAACGGCCCAGTGCCAGCCACCTTAGCTAGGTCCACCCTATGCTGCTTGGCCAGCTTCTTAGCTTGCGGGGTGGCAATGCCCTTCGTGCCGGCTGCCACCGGCGCCGGAGCCGCCGGAGCGGCCGCGGGTGGAGGAGGCGGCGGTGGCGGCGCGGCGGCATCGGAGGGTGGAGGCGCCTGCTGCGGGTGGGCCTTGGAGAGCTCCTGGGCCTTGGCGAGGGCGGCCTGGAGGTCGTCCTCGGACTCGGCGAGCAGCGCGATGGGGGCGCCGACGGGGGCGGACTCACCGGCGGGGACGAGGACGGCGGCGACGATGCCGTCGTGGAACGTCTCGACGTCCATGTCGGCCTTGTCGGACTCGACGACCACCACGGCGTCCCCCTTGGCGACGCGGTCCCCCTCGGCGGCCGACCACGACACGATCTTCCCTTCCGTCATGGTGGAGCTCAGCGCCGGCATGAAGATCTCCCGGATCTTGGCCCGCACCACCACCATCCTCGCCCGCCGCCTCGCCACCGGCGCCGCCGCGGCGCCCCGCCCCACGAGGAGGCGCGCCGGCACGGTGGAGGCCGCGGCCGAGAGCGAGACGGGCGCTGGAGTCGTCGCCATTGGAGAGGTGGAGGTGGAGGAGGAGGAGGTGGAGGCGGCGGAGGCGAGGTGGGGGAGGTCGGGTGTATAAGGAGAAGGTCGGCGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0414600.1 | 8 | 20843027 | A | G |
| Osa08LNT0414600.1 | 8 | 20843296 | T | G |
| Osa08LNT0414600.1 | 8 | 20825915 | C | G |
| Osa08LNT0414600.1 | 8 | 20833230 | A | G |
| Osa08LNT0414600.1 | 8 | 20834457 | T | C |
| Osa08LNT0414600.1 | 8 | 20836687 | A | G |
| Osa08LNT0414600.1 | 8 | 20840846 | G | T |
| Osa08LNT0414600.1 | 8 | 20845478 | T | C |
| Osa08LNT0414600.1 | 8 | 20846398 | T | G |
| Osa08LNT0414600.1 | 8 | 20849893 | T | G |
| Osa08LNT0414600.1 | 8 | 20822881 | A | G |
| Osa08LNT0414600.1 | 8 | 20823653 | C | T |
| Osa08LNT0414600.1 | 8 | 20824555 | A | G |
| Osa08LNT0414600.1 | 8 | 20824641 | C | G |
| Osa08LNT0414600.1 | 8 | 20825168 | A | G |
| Osa08LNT0414600.1 | 8 | 20825198 | A | G |
| Osa08LNT0414600.1 | 8 | 20825340 | G | A |
| Osa08LNT0414600.1 | 8 | 20825409 | A | T |
| Osa08LNT0414600.1 | 8 | 20825428 | T | C |
| Osa08LNT0414600.1 | 8 | 20825431 | T | G |
| Osa08LNT0414600.1 | 8 | 20825451 | A | G |
| Osa08LNT0414600.1 | 8 | 20825479 | A | G |
| Osa08LNT0414600.1 | 8 | 20825501 | A | G |
| Osa08LNT0414600.1 | 8 | 20825652 | C | T |
| Osa08LNT0414600.1 | 8 | 20825653 | T | C |
| Osa08LNT0414600.1 | 8 | 20825755 | T | C |
| Osa08LNT0414600.1 | 8 | 20826128 | T | G |
| Osa08LNT0414600.1 | 8 | 20826230 | A | T |
| Osa08LNT0414600.1 | 8 | 20826603 | T | C |
| Osa08LNT0414600.1 | 8 | 20826643 | A | G |
| Osa08LNT0414600.1 | 8 | 20827240 | A | G |
| Osa08LNT0414600.1 | 8 | 20827312 | T | C |
| Osa08LNT0414600.1 | 8 | 20827338 | A | G |
| Osa08LNT0414600.1 | 8 | 20827527 | A | G |
| Osa08LNT0414600.1 | 8 | 20827941 | T | C |
| Osa08LNT0414600.1 | 8 | 20827967 | A | G |
| Osa08LNT0414600.1 | 8 | 20827972 | A | G |
| Osa08LNT0414600.1 | 8 | 20828247 | G | T |
| Osa08LNT0414600.1 | 8 | 20828248 | T | C |
| Osa08LNT0414600.1 | 8 | 20828404 | T | C |
| Osa08LNT0414600.1 | 8 | 20828535 | T | C |
| Osa08LNT0414600.1 | 8 | 20829490 | T | C |
| Osa08LNT0414600.1 | 8 | 20829537 | T | A |
| Osa08LNT0414600.1 | 8 | 20830253 | T | C |
| Osa08LNT0414600.1 | 8 | 20830324 | G | A |
| Osa08LNT0414600.1 | 8 | 20831268 | G | C |
| Osa08LNT0414600.1 | 8 | 20831617 | T | C |
| Osa08LNT0414600.1 | 8 | 20831759 | T | C |
| Osa08LNT0414600.1 | 8 | 20831898 | G | A |
| Osa08LNT0414600.1 | 8 | 20832283 | C | T |
| Osa08LNT0414600.1 | 8 | 20832453 | G | T |
| Osa08LNT0414600.1 | 8 | 20832618 | A | G |
| Osa08LNT0414600.1 | 8 | 20833859 | T | C |
| Osa08LNT0414600.1 | 8 | 20834030 | A | T |
| Osa08LNT0414600.1 | 8 | 20834588 | C | T |
| Osa08LNT0414600.1 | 8 | 20834591 | A | G |
| Osa08LNT0414600.1 | 8 | 20834600 | T | C |
| Osa08LNT0414600.1 | 8 | 20834651 | A | G |
| Osa08LNT0414600.1 | 8 | 20834660 | G | A |
| Osa08LNT0414600.1 | 8 | 20835075 | T | C |
| Osa08LNT0414600.1 | 8 | 20835096 | A | G |
| Osa08LNT0414600.1 | 8 | 20835117 | A | G |
| Osa08LNT0414600.1 | 8 | 20835245 | C | A |
| Osa08LNT0414600.1 | 8 | 20835369 | T | C |
| Osa08LNT0414600.1 | 8 | 20835906 | T | A |
| Osa08LNT0414600.1 | 8 | 20835920 | T | C |
| Osa08LNT0414600.1 | 8 | 20835955 | A | G |
| Osa08LNT0414600.1 | 8 | 20836081 | C | T |
| Osa08LNT0414600.1 | 8 | 20836094 | G | A |
| Osa08LNT0414600.1 | 8 | 20836485 | T | C |
| Osa08LNT0414600.1 | 8 | 20836768 | C | A |
| Osa08LNT0414600.1 | 8 | 20837014 | T | C |
| Osa08LNT0414600.1 | 8 | 20837025 | G | A |
| Osa08LNT0414600.1 | 8 | 20837446 | C | T |
| Osa08LNT0414600.1 | 8 | 20837611 | T | C |
| Osa08LNT0414600.1 | 8 | 20837669 | A | C |
| Osa08LNT0414600.1 | 8 | 20838084 | A | G |
| Osa08LNT0414600.1 | 8 | 20838133 | T | G |
| Osa08LNT0414600.1 | 8 | 20838395 | A | T |
| Osa08LNT0414600.1 | 8 | 20838460 | G | A |
| Osa08LNT0414600.1 | 8 | 20838732 | T | C |
| Osa08LNT0414600.1 | 8 | 20838798 | A | G |
| Osa08LNT0414600.1 | 8 | 20838853 | C | A |
| Osa08LNT0414600.1 | 8 | 20838956 | T | C |
| Osa08LNT0414600.1 | 8 | 20839305 | C | A |
| Osa08LNT0414600.1 | 8 | 20839500 | T | C |
| Osa08LNT0414600.1 | 8 | 20839539 | A | G |
| Osa08LNT0414600.1 | 8 | 20839589 | T | C |
| Osa08LNT0414600.1 | 8 | 20839985 | A | G |
| Osa08LNT0414600.1 | 8 | 20840139 | T | C |
| Osa08LNT0414600.1 | 8 | 20840399 | T | C |
| Osa08LNT0414600.1 | 8 | 20840637 | A | G |
| Osa08LNT0414600.1 | 8 | 20840685 | A | G |
| Osa08LNT0414600.1 | 8 | 20840699 | T | C |
| Osa08LNT0414600.1 | 8 | 20840784 | A | G |
| Osa08LNT0414600.1 | 8 | 20834556 | T | C |
| Osa08LNT0414600.1 | 8 | 20840792 | T | G |
| Osa08LNT0414600.1 | 8 | 20840852 | A | G |
| Osa08LNT0414600.1 | 8 | 20840913 | T | C |
| Osa08LNT0414600.1 | 8 | 20841015 | T | C |
| Osa08LNT0414600.1 | 8 | 20841379 | A | G |
| Osa08LNT0414600.1 | 8 | 20841388 | A | G |
| Osa08LNT0414600.1 | 8 | 20841747 | A | C |
| Osa08LNT0414600.1 | 8 | 20841896 | G | A |
| Osa08LNT0414600.1 | 8 | 20842177 | A | G |
| Osa08LNT0414600.1 | 8 | 20842243 | A | G |
| Osa08LNT0414600.1 | 8 | 20842324 | G | A |
| Osa08LNT0414600.1 | 8 | 20842553 | A | G |
| Osa08LNT0414600.1 | 8 | 20842672 | C | T |
| Osa08LNT0414600.1 | 8 | 20842685 | A | G |
| Osa08LNT0414600.1 | 8 | 20842686 | T | C |
| Osa08LNT0414600.1 | 8 | 20843201 | C | T |
| Osa08LNT0414600.1 | 8 | 20843705 | C | T |
| Osa08LNT0414600.1 | 8 | 20843767 | G | A |
| Osa08LNT0414600.1 | 8 | 20843881 | T | C |
| Osa08LNT0414600.1 | 8 | 20843971 | T | C |
| Osa08LNT0414600.1 | 8 | 20844163 | A | G |
| Osa08LNT0414600.1 | 8 | 20844307 | C | T |
| Osa08LNT0414600.1 | 8 | 20844339 | T | C |
| Osa08LNT0414600.1 | 8 | 20845058 | T | C |
| Osa08LNT0414600.1 | 8 | 20845090 | A | G |
| Osa08LNT0414600.1 | 8 | 20845526 | A | G |
| Osa08LNT0414600.1 | 8 | 20846312 | C | T |
| Osa08LNT0414600.1 | 8 | 20847005 | T | G |
| Osa08LNT0414600.1 | 8 | 20847037 | G | T |
| Osa08LNT0414600.1 | 8 | 20847119 | T | C |
| Osa08LNT0414600.1 | 8 | 20847232 | G | A |
| Osa08LNT0414600.1 | 8 | 20847410 | C | T |
| Osa08LNT0414600.1 | 8 | 20847560 | T | C |
| Osa08LNT0414600.1 | 8 | 20847620 | A | C |
| Osa08LNT0414600.1 | 8 | 20847672 | T | C |
| Osa08LNT0414600.1 | 8 | 20847690 | G | A |
| Osa08LNT0414600.1 | 8 | 20847722 | A | T |
| Osa08LNT0414600.1 | 8 | 20847741 | A | G |
| Osa08LNT0414600.1 | 8 | 20847762 | C | T |
| Osa08LNT0414600.1 | 8 | 20847989 | T | G |
| Osa08LNT0414600.1 | 8 | 20848948 | G | T |
| Osa08LNT0414600.1 | 8 | 20849101 | G | T |
| Osa08LNT0414600.1 | 8 | 20849170 | C | G |
| Osa08LNT0414600.1 | 8 | 20849901 | T | A |
| Osa08LNT0414600.1 | 8 | 20850385 | C | A |
| Osa08LNT0414600.1 | 8 | 20850557 | T | G |
| Osa08LNT0414600.1 | 8 | 20851712 | T | A |
| Osa08LNT0414600.1 | 8 | 20851891 | T | C |
| Osa08LNT0414600.1 | 8 | 20853141 | C | A |
| Osa08LNT0414600.1 | 8 | 20853375 | C | A |
| Osa08LNT0414600.1 | 8 | 20854419 | T | G |
| Osa08LNT0414600.1 | 8 | 20854482 | G | A |
| Osa08LNT0414600.1 | 8 | 20854812 | A | G |
| Osa08LNT0414600.1 | 8 | 20855001 | G | A |
| Osa08LNT0414600.1 | 8 | 20855131 | C | T |
| Osa08LNT0414600.1 | 8 | 20855169 | T | C |
| Osa08LNT0414600.1 | 8 | 20855515 | A | G |
| Osa08LNT0414600.1 | 8 | 20855577 | A | C |
| Osa08LNT0414600.1 | 8 | 20855602 | T | C |
| Osa08LNT0414600.1 | 8 | 20855681 | A | G |
| Osa08LNT0414600.1 | 8 | 20857620 | A | G |
| Osa08LNT0414600.1 | 8 | 20859287 | A | C |
| Osa08LNT0414600.1 | 8 | 20859306 | C | T |
| Osa08LNT0414600.1 | 8 | 20859588 | A | T |
| Osa08LNT0414600.1 | 8 | 20846909 | T | C |
| Osa08LNT0414600.1 | 8 | 20861311 | T | C |
| Osa08LNT0414600.1 | 8 | 20861564 | A | G |
| Osa08LNT0414600.1 | 8 | 20859965 | A | G |
| Osa08LNT0414600.1 | 8 | 20821407 | T | C |
| Osa08LNT0414600.1 | 8 | 20860103 | T | C |
| Osa08LNT0414600.1 | 8 | 20860181 | A | G |
| Osa08LNT0414600.1 | 8 | 20860097 | A | G |
| Osa08LNT0414600.1 | 8 | 20860396 | T | C |
| Osa08LNT0414600.1 | 8 | 20856534 | G | A |
| Osa08LNT0414600.1 | 8 | 20856620 | A | G |
| Osa08LNT0414600.1 | 8 | 20856887 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa08LNT0414600.1 | DTM_#DNAt_MULE_japo_Os1224 | Chr8 | - | 20859691 | 20860401 | 710 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0414600.1 | osa-miR5512b | Translation | 5.0 | 9.924 | 1 | 21 |
| Osa08LNT0414600.1 | osa-miR6256 | Cleavage | 4.5 | 19.082 | 1 | 22 |
| Osa08LNT0414600.1 | osa-miR396c-3p | Cleavage | 4.0 | 18.019 | 1 | 21 |
| Osa08LNT0414600.1 | osa-miR413 | Cleavage | 5.0 | 17.627 | 1 | 21 |
| Osa08LNT0414600.1 | osa-miR444d.3 | Cleavage | 5.0 | 15.967 | 1 | 21 |
| Osa08LNT0414600.1 | osa-miR5071 | Cleavage | 3.5 | 21.263 | 1 | 21 |
| Osa08LNT0414600.1 | osa-miR5512a | Translation | 5.0 | 9.924 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0414600.1 | 8 | nan | Physiological trait | Source activity | R727 | R202 |
| Osa08LNT0414600.1 | 8 | qCTS8-2a | Resistance or Tolerance | Cold tolerance | RM223 | RM284 |
| Osa08LNT0414600.1 | 8 | qCTS8-2b | Resistance or Tolerance | Cold tolerance | RM223 | RM284 |
| Osa08LNT0414600.1 | 8 | qPN-8 | Morphological trait | Seed | RM223 | RM80 |
| Osa08LNT0414600.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RG978 | RZ66 |
| Osa08LNT0414600.1 | 8 | Aroma | Physiological trait | Eating quality | RG28 | RG1 |
| Osa08LNT0414600.1 | 8 | aro8-1 | Physiological trait | Eating quality | RM223 | RM80 |
| Osa08LNT0414600.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)