© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0414800.1
CCTGTTTTCATCTGTCATGTTTCCAGTGGCTATTTGCCAGTAATGAATACGATCCTGAGTGAGAAACTACTCGAAATTCAGTATTATTTTCAATAGTGGGGTTTTTAGGCACTCTAAGATGTCACTGACTTTTCTTAACTGTTCAATTAATATATTCATTGCTTTTATCCTTATGAAGGAATGGAAGACTAAAGGGCTTGTATTGGATCAACTTAAATTTCAGTTTTGGAGTAATGCAATTTTCAACCTTCTTTTCGTAACAAACATATGGTAAAAGGACTCGAAGAGGGTTAAAACTTGATAAGATAAAAGGACTCGAAGAGGGTTAAAACTTGACTTTACAGCACTGGTTAATCATTCTGGTTCCGTTTCCAAATCTAGGGAGACAAGGCAACCTGGGCGTTGAACTAACAACTGTAAAGTCCCTGAGGGCATTAATTGTACTGTCCCTGCTATGGTCCTGGAAGGTGGAGGCTGACATAGAGTAATTTTCAGTTTTATACCAATAGAAAGGTACTGACAAATTGCAATCTGGTTTATTTACTACATCCCCACAGGCCCACGGTACCCTAATATTTCACAAATGCGTGGAGGAAAAATTTGCAAACTGCGGAAGCAGTTGTAGACTCTTGTAGCTTCTATTTTCTTTGCTCTTTCAGTTTCTTTTGACATTGGATGATCCAATGGATTTGCTCAGAAGGCCTTTCTTAAAAAGTGGAGAGGACTCTGCTCTAGAGCAAAGGTGGCTGCAGGGGTGGCTGCTCTGAATTCACCATACTGAAGATGCCATTCCAATAGTTCTTATTCTCTGCATCTTCTGACACCTGGCTTCTTTGCTCATCTTGGCCATTGCTGGACTCATCCCAGCATTCTGATGTATCATGCATATTGGATCCATCAAGCAGCATGCCTGTGAAGCCTGCTCCGATATTGGCTGTCCCTGGGAACCATGACTCCTCACAGCCAATGAAGTGTTCTTCTGTCTCTTTACCATGCATTCCCTGCAGTTGTTGCTTACTGACAAACTTCCACTCACTTTCTTCACCCTCCAGTTCATCGCTTCTTTGCTGCCACACATTGGAGTTGCTTTCGGATAATTCTAGGGCGGTTGTTGTTGAGAATGGCAGCATGCTAGCATTACTCCCTGCGAACGTCAGTGTGGAGGTGGGTGACTCCAGGTCTATCTTTGCACTCTGCCATGCATTCAACACATCGAAGCATGGAGAAGGTGTTGAAGCAGGTGGGTTGGTTGACTGTGCATGGAGTTTGCTTGGTGTAGAAGCTGCTATGCGCATCTTGGATTCTCGAGCAAGCCGTGCCTCGGCCTCGAGGCGGGCACTCTCCCACTGAGCCATGTGGCTGAGACTGGCTGTGACTTTGGCTGATTTGTCTCCCGCCGTGTTGTTCAGAGTGCCGTTGATGGCTTTGTGGGTGACAGGATCAATTCCCATCTTGGCCAACCTCTTTTTCAGGTGGGTGTTCCAATAGTTCTTGATCTCATTGTCAGTGCGCTTTGGTAGATGTGTTGCAATGGCAGACCACCTGTTTCCAAGAAGAGCATGAAGTTGGATGATGGTCTGCTCTTCTTGTAAGCTGAATTTTCCTCTCTTGATGTCTGGTCTCAGGTAGTTTGTCCATCGCAACCTGCAACTCTTGCCGCACCTCTGCAAACCGGCTTTTGAAGGCAATGCTCGCCAGCTGCCATGTCCATGCTCCTCAATGTATGCAAGCAGCTTCTGGTCTTCCTCTGGTGTCCATGGACCTTTCTTCAGGCCAATCTTCTCACAGCATGGTGAACGCCCCATTGGAGTAGTGCAATATGCTATCTAGCAGAAGCCTAGAGCTGGCAGCTGGGTGTGGAGAATGATATATAGAGCTGGAGAATGGAGGAAGACGAGTTGAAGCTATAAATCATTAGCATGGTATGAAGGTATGAGCCCTAATTTTCCATGCCTTATCATGACATAAATGGCCTTGTGACAGCTTTTTCCAGTGTAACCGTATAAGTTACTTAGGTACAGGTAGATGCACAGCTCCACCATGATCAACAGATGCAAGAATAACGTAACAAACAAATGACTTCAGTTGGGGGTGAGTTTAACAATTGGTCCAATTGACTATGGCCCATGAATTGAAAACTGCAATAACTCCACGGTGATGAGACCCCACCCATGCCACCAAATCCAGGTTGGTGATGGGGTAAACAAAGCAATGTTCTTTTCTCCTTTTTTTCCCCCCTGAGGTGTGTGATGGTCAAGGTCCTGGTTTGTTTACTATAGGACGGTCGTCTTAAAGTCATTTGGACTCTGGGTTGGAAATATAGGAGGGGAGCATTAAGTGTTAACTTGTTTTATTTGTAGATAACTAGTATGGTACTCTGGAGAGGTATGTGTTGTTTTAGCAGCCCAGCACAAGGGGTTTGATGGTTGATCTGTATTGGGCCTATTGGCTATTTGGCTTAAAAATGTCTGGAACTAGAGATTTACCTCGGTGAGCAGTTATAGATGGTGTGCAGCTTGTTTTTAGCAAACACTGCTAGTGCTTGTTTTTAGCTAACTATATATAGAGTGCAAGTTATTTTTACTAATGCCTGCTTCTAATGCATATTTGATTTATGTATGGTTTCTATTTTGGTTTTAGGTTTAAATGAAAGGACTAAATAGTTGAACATTAAGTCAGAACAATTTATGAATTGCGAATGTCTTGTAGAATACCAACTACCAAGTCATTGCTTCAGTGAGACGTAGAAATGGAAGGATGTGTCAGGTCATTGAAGCTTTGCTTTACAAAAGACAGAAAGAAACAGAAATGAATATGATTGCAGCCTTTTACGATGAACGGTGTTAATGTTTGCAGATATTGCTCACCTGGCTAGCTGAGTTGTGAGCATTATAAATGTGCGATCAGTGATTAAAAGCAATAATAAGATACTGCAAAGAAATATATTAGTTACATAAATAGAAATAACACACAATTGAAAATACCATGTCATATAATTTCATCTCCCTGCCTTGACAGTTCCCATTCACTGTTTACCATAGTAATCATATCCATTGTTTGTTTGTATTAATGTTGTCAAGCTAATGTCAGAACAAATTAACAAGTAATATCATGTCGTGTAAAGAACTACAGTTTGGTTTGCTAACACTGATTATGCTTGATCTTTTATAGCGCTACGTAATACATTATATGATCTAATATTTTTGTGATCTGTCTTTAATTAATTATACTGGGGGTTATTTTTATATGATCCCAGTTTCAGTTTCTTTAATACTACCTCCGTTTCAGGTTGTAAGACTTTTTAGTATTGTCCACATTCTTATAGATGTTAATGAATCTAGGCACACATATATGTTTAGATTTATTAACATATATATGAATGTGGGCAATGCTAGAAAGTCTTATAATATGAAACGGAGGAAGTATCATTTAAAAGAAGTTCCAAAATTCAAGGTTTTTTACTGATAAAAATGCATGGAATGATATTAAAAAAAATCAATTAAAGAAGAATTTGCAAAAACAATGCCTCTTATATTCCATCTATAAGGTTCATATGGAATCAATGTTTCTTAGGTATACAGAGAAGAACAGAAAAGACCATCGATTGCATGAAGAAAGAGAGAGGTAGCTAATCCTTATTACTGGTCTTATGTTCCAGTTACCGTGATAAAAATGTCTGCATGTCATCTCTTTCTCCCTGGAGTTCAACCTGCTTTTGAAACGAAGGGCAGGAACTCTGCCTCATTCCTAACAGAAGAATAAGAAAACAAGCTACAAATCCAGTCAAAAACACCACAAAACCGGCTCATGTTAACTAGCATATTTACTGGCTCTTCTCTAGTAATTCTTTGACCGTAGTATCTTAATCAAAAAGCACAGGAGTTTCTGATATCACTGCCCTGCAGCAGGAATATGTGGTGACAGAAGAAACAGAAGGACGCAAGAGCGAGCGATCTCTACATCGGCAGCTACAGTGATTGGACTATTAGCTGATGATATCTCCACAGTGCCTTACTGTGAAGATGCACAGCCTCTTAAATGGCACCAGATGGATGGTCTCCCCCGATTACCTTTCCTTGAGGTATGTCTTGTTTAGCTCTTTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0414800.1 | 8 | 21019525 | A | G |
| Osa08LNT0414800.1 | 8 | 21019557 | A | G |
| Osa08LNT0414800.1 | 8 | 21019888 | T | C |
| Osa08LNT0414800.1 | 8 | 21021988 | G | A |
| Osa08LNT0414800.1 | 8 | 21022846 | C | T |
| Osa08LNT0414800.1 | 8 | 21021442 | T | C |
| Osa08LNT0414800.1 | 8 | 21022996 | C | T |
| Osa08LNT0414800.1 | 8 | 21020490 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0414800.1 | osa-miR5814 | Cleavage | 3.0 | 14.007 | 1 | 24 |
| Osa08LNT0414800.1 | osa-miR5825 | Translation | 4.5 | 22.192 | 1 | 24 |
| Osa08LNT0414800.1 | osa-miR7694-5p | Cleavage | 5.0 | 14.789 | 1 | 24 |
| Osa08LNT0414800.1 | osa-miR166a-3p | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166b-3p | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166c-3p | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166d-3p | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166f | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR159a.1 | Cleavage | 5.0 | 16.013 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR159b | Cleavage | 5.0 | 16.013 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR159c | Cleavage | 4.0 | 16.013 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR159d | Cleavage | 4.0 | 16.013 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR159e | Cleavage | 4.0 | 16.013 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR159f | Cleavage | 5.0 | 16.013 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR319a-3p.2-3p | Cleavage | 4.5 | 15.837 | 1 | 20 |
| Osa08LNT0414800.1 | osa-miR319b | Cleavage | 4.5 | 15.837 | 1 | 20 |
| Osa08LNT0414800.1 | osa-miR164d | Translation | 4.5 | 17.167 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166g-3p | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166h-3p | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166i-3p | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR393b-3p | Translation | 4.0 | 14.954 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR408-5p | Cleavage | 4.5 | 21.115 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166m | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR166j-3p | Cleavage | 5.0 | 23.333 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR1439 | Cleavage | 4.5 | 15.945 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR1439 | Cleavage | 5.0 | 22.196 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR1428e-3p | Translation | 5.0 | 8.752 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR2092-5p | Cleavage | 4.5 | 13.07 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR3979-3p | Translation | 3.5 | 14.209 | 1 | 20 |
| Osa08LNT0414800.1 | osa-miR3979-3p | Translation | 4.5 | 17.977 | 1 | 20 |
| Osa08LNT0414800.1 | osa-miR5507 | Cleavage | 4.5 | 19.74 | 1 | 21 |
| Osa08LNT0414800.1 | osa-miR2275d | Cleavage | 3.5 | 10.414 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0414800.1 | 8 | nan | Physiological trait | Source activity | R727 | R202 |
| Osa08LNT0414800.1 | 8 | qCTS8-2a | Resistance or Tolerance | Cold tolerance | RM223 | RM284 |
| Osa08LNT0414800.1 | 8 | qCTS8-2b | Resistance or Tolerance | Cold tolerance | RM223 | RM284 |
| Osa08LNT0414800.1 | 8 | qPN-8 | Morphological trait | Seed | RM223 | RM80 |
| Osa08LNT0414800.1 | 8 | aro8-1 | Physiological trait | Eating quality | RM223 | RM80 |
| Osa08LNT0414800.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0414800.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RG978 | RZ66 |
| Osa08LNT0414800.1 | 8 | Aroma | Physiological trait | Eating quality | RG28 | RG1 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|---|---|---|---|---|---|---|
| Osa08LNT0414800.1 | osa-MIR11339 | 90.909 | 154 | 1 | 154 | 4.01e-54 | 207 |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)