>Osa08LNT0415000.2

GGGACTGATGGAGTACCATGTACGATGCAAGTAGGCAGTGCAGGGAGCGATATATCCGGGGGTGGGGGTGGGGGTAAGTGGGCGCCTGGGCGGTGGAGGAGACGCAAGTGTCAATCGGAGAAATTAAAGGCAAAAACGGTCCATGCCAAGCGCTTGACGCGGCCACGAGATCGACGGCCCCCGTCCCCGTACGTCGCGCTCCATCTCCATCAACATCGCTCCCCTCGCCGCATCAGACAAACAGCCGCAGTGCCATTCTTCCTTGCAACCAGTGCACTGCACTGCACTGCAGGGCTACCAAACGACTATAATATTGTTTACGTGGAACGTGCGCTGCTACCTGTAACTGGAGTACATGGCCGCCGGTCACCGTCCACGCTGCCACCTACTATCAAACACCAAATCATATCATCATCCGGTCTCTGCTCCGGTCGGCGTACGGCCGCGCCCGCCCTGGCGACGGTACGCGCCGAGTGTCCGTGCACGGGGCACTGTGGCCGCGTTCGTGCATGACGCGATGGCCTTTTGTCCGTTATCCATGGCGACCTCCTCCATCCCGCATCCATCCATCCATCACACGCCCCCTCGCTCCCCCCGTGTGATCCTGCAGGTTTGTGGGGGCACACGCAAGTAACAGTACAAGCTACTATTCTCTCTCAGTCTTTCTCCTCCCCCGGAGCCTATCCAGATCAAGCAGAGCAGCCACACGGCCGGCCGCCCTGGCTGGTCGATCCATGACTGTGATCAGCTCGATCTGCGGTTAAAAGTTAAAAAACCAGATGCAAACTGCTTAGGATTGGCAGAGGGGAATAATTTGGAGCAGGGGATCACTCAGGCTGCCTGCCACTTTGGGTTACTGGGCACTGGCTGGTGGTGGTGACAAGGAGAGCTTCTGCTTGACTGCTCTGGACATATCACATACTATGGTTGAGGAATGAAGAACAGGTTAACACAGGTCAAAAAGAGTGTGGTTAGAACTTATAAGAGATGAGGATGGCGTTAGCGAAGGAACATTTGTGTTCTCCAGCTGATTATTCCAGTAAAAAAGATTCCGAAACCGGAATGAATAACAATTAGCTGTTTGAGCAATGATGCTTTAGATGCGGAAGTCCGCTTCAAGGAAGCTGTGGTTGTGTCCTTCGGTGCCAAATTTTCAGTGAGCACAACGCCGTCCAAACTGGAAGGTTGATTTTATTCACTTGAGTGATTCTTTTGAGGCGATAACATCCTCTAGGTCTTGTGGCGATAACAGCTTCGTGGAAGGCTTAAACCCTGTGTCATCAGAGAGCACTGCCTCTGGTTCTGTGGGTTCGACTGTGAAGTGGTCTCCGAGGGCAGAGATGATCCCTTCGGTGAAAACGGATCGTGATGGCATATACTCCTTCATGCGACACAAGAAATCTGTGTGGTTCCTCGCCAGTCGATAATCAGGTGCACGTTTTGGGATTTTGAGATAATCCATATTCTTCATATCATAATCCCATAAGAATGATGTATGATGAACCCAACGATCTCTTGTAATGGATTGAGCATTTCCTCCAAACTTCCTTTGACTAAAGGCATAATCATTCTCACGCAGATGAAATTCACCGAAACCATCAAACACCTTGTCATACAACTGACCAGTCCAAGACATGATATCCCGCGGAAATGGCTGCAGTCCAGGAATGGCGGTCTTGCTGCATATGAATGTGGCAAACACTGTCCCCTGATCGACGATGACTGTGCCACCACCACTGAACCTCCTTATAACCGGAACTTTATCCCGGAGGACCGGCTCAATCTCGACAAGCTCCGAAACTCTCCCTGACACGCCCATGACGATGGTGGCAGGAGCCGTGCCGTCGTTGATGATGCACCAGTTATCCCCGGTACGGCGCAGCAGCCGTTCCTCCAGGTGCAGCTGCCGCAGGATCGGCACGCCGCTCATGGTGACCAGCCGCATGAGCGGGCGACCTGCGCCCCTCGCTCCAGCCACCCCAGCGGCCATTCTTGTCTCGGAATGGGCGGCTCACGCTGGGAGTCTCTCAGTGGCGCATTCCGTCGAACAGGCCGCGCGCGCGCCGCAGCTTGGCAGGGTCAACCCCTCCGGGACCTCGACGAGGATGCCACGCAGAGCGCGTGGATAGGGAAGGATCGAGGCCGTCGGCGCCGTGCCTACGGGCGGCCCTCTCGCCGGCGACGCGCACGCGAGGCCGCGAGAGGGCGAAGCCTACCTCCGCCGGCGAGACGGGGAGGGAGATGAGAGAGGAGGACGAGTTTGACCAGATTTCC

Explanation	CPC Score
noncoding	-1.08477

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0415000.2	8	21164639	A	G
Osa08LNT0415000.2	8	21166100	T	C
Osa08LNT0415000.2	8	21167066	A	C
Osa08LNT0415000.2	8	21167754	A	G
Osa08LNT0415000.2	8	21166530	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0415000.2	osa-miR156c-3p	Cleavage	4.5	22.889	1	22
Osa08LNT0415000.2	osa-miR156g-3p	Cleavage	4.5	22.889	1	22
Osa08LNT0415000.2	osa-miR396a-5p	Cleavage	4.0	21.954	1	21
Osa08LNT0415000.2	osa-miR396b-5p	Cleavage	4.0	21.954	1	21
Osa08LNT0415000.2	osa-miR396c-5p	Cleavage	4.0	21.954	1	21
Osa08LNT0415000.2	osa-miR2870	Translation	3.5	17.397	1	21
Osa08LNT0415000.2	osa-miR2924	Cleavage	4.5	19.337	1	21
Osa08LNT0415000.2	osa-miR3979-3p	Cleavage	2.5	13.526	1	20
Osa08LNT0415000.2	osa-miR3982-5p	Cleavage	4.0	20.31	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0415000.2	8	nan	Resistance or Tolerance	Drought tolerance	RG978	RZ66
Osa08LNT0415000.2	8	Aroma	Physiological trait	Eating quality	RG28	RG1
Osa08LNT0415000.2	8	dth8	Physiological trait	Flowering	RG333	RZ66
Osa08LNT0415000.2	8	nan	Physiological trait	Source activity	R727	R202
Osa08LNT0415000.2	8	qCTS8-2a	Resistance or Tolerance	Cold tolerance	RM223	RM284
Osa08LNT0415000.2	8	qCTS8-2b	Resistance or Tolerance	Cold tolerance	RM223	RM284
Osa08LNT0415000.2	8	qPN-8	Morphological trait	Seed	RM223	RM80
Osa08LNT0415000.2	8	aro8-1	Physiological trait	Eating quality	RM223	RM80

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus