>Osa08LNT0415900.2

CCGTTGACAAGCTGTAGAGAACTGAATGAAGCAACCATAAAAAAAAAACATGTTAAGCGATTTAGAAGCCTAGGCTAGAAAATACACTACAATGAAACAAAAAAAAAATCTAAAATCAAGTTTCAAGATTCAAATTTTGGCCGCTGTTAATAAACCAACAACCGTACAATGAGATTCACACAAAAAAACAAGACATGTTCATCAAAACTATAAGTTTGGATTAGCTCAACATAGAACCTTGCCCTTGCTATGACGGTGCAAGTGAGCTGCCCATTCTCTCAACATTCAGCATCGACACCACCTTTGCACAACTACAAATTGCCATTGCCCTTGTATCCTTCACCTAGCTGGTTTTGACACCATATTTCCCTTCACTCTGTCCTTCGCAAGGGATGCAGACCATCTTGGCGGATGGTGATATAGACCATTTGCAATAGCTTCATCTTCATCTTGGTTTGTGCAAAAGAAAAGAAGCCGATCCACATCTTGTCTATCGAACGAAGATACTGGAGTGCCATTTACAGAAGCAATTCCAAGTGGAACCAGGCTTTTGTAAGACGTTTCTTGAGCAAGATATTTCAAAACCTGTGCTGCCCACTTAGGTAAGGTCATCAAGACTTCAAAAGTGGAAGCTCCAGAAGCCACGGACATTGAAGTCAAAGGCTCGGCTGAAGATGGTCTATCATCCTCGCTAACTGAGACAACACGAACTAACCGGCGGCTCTCAATAAGTTCTTTCTTAATATGCTTCTCCAAAAGCTTGTCATCAAAACAGGTTTGCGGACTGCCAGAATGAAGCAGTGACACGTGTGAAGAACTGGATGTTGTGATATCACAACATATTGTAACCACCCCGTCTAATAGAGTTGAATCAACATGAAGAGGAGGAGCAGCACTGACTCTATCCTGGAGTTTGCACCATCGAAATTCAATATTGAGAAGAGCATTCAAACCATCCTCTAGTGAGTTCAATATAGATGAATCTTATAGGGGTGCAATGTGCTCCACAAATAAGAAGCTTTAAGTGCACATCTTCATCGTATATCTTTATGTCTGGAAAATATTCGGAGGTATCTTCTTCCTCAGCCATTTTGTTTCCAGGAGGGGTGATATATATCCTTGGAGCATCCCCAAGTAGATGAGGCCCAAGCATGAGACGTTGCACCTCATTATTTCTTACGCAGTATTGTTCAAACGAAGTATATGCAAGCTGAAATGCATCCCATGCATGGCTGCATGAGCTCGGAACAACTGACATCAAGGAATGGCGAAAATGAGATGCTGCAAACGATGATAATGAATATCTCCAATACATTATATATGAAATCCCCTTCGATTGAAGAGATTGAGCAATCTTTTCTCCACTTGGAACTTCCAAATAAACTATGGTAGGAAAAGGCGGACAAATGAGTGAAGAAAATATCTGTGGATCCGATACATCAGCATCGCCCCAGACAAGTCTACCAATTTCTTCCTCCTTGTCAAGCTGCTGACCCTGGAAGTACATGAAGCGGGGCTGCAAAGCACGTTGTGCCTCCAGAAATTGATCAACCGTAGGATTGATCAGCGTGTGCACGTCCAACCTCCCGGATGAGATCAACTCCGGGAATGGGAATGACGGCCGCGGCCGCTGGGACTCGGGCACTGGATCAGGTGGCATCCGCTGCTTGCCTACCTTACCGCACAGCACTGCGAGCATCGTGCACTTCACCCTTGAGCCGCTCGGGAAATGAGGCATGGTTGAACAAAGAACACCACAGATCCGCAACCGCTGAACCCTGCAAAGGCCCGCTCCAGCCAGTGGAGATCGAACGGCGCACGGAAGCGGCCGGGTATCTCCTCAACTCCTCACATTGCTACGGCTGCTGATGCTAATGCCGTCGCGGTGGAGATATCCCTAGCACGTTTCCCCTTCTCGCGGTCGCGTCCACGACGAGATGGTGATGACGACGACGACGATTCATAGGAATATGTTCCGTGTTTTTTTCTGGGCGCGTACCTCAGCTTTGATTATCTGCTGCTGCTGCTTTTGGGGTTTTTCGGCCGCATCCACCTCGAGAGCAATACGCGATCGGATGC

Explanation	CPC Score
noncoding	-1.16432

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0415900.2	8	22055745	G	A
Osa08LNT0415900.2	8	22056967	T	A
Osa08LNT0415900.2	8	22058345	T	G
Osa08LNT0415900.2	8	22059394	A	G
Osa08LNT0415900.2	8	22060462	A	G
Osa08LNT0415900.2	8	22062078	T	C
Osa08LNT0415900.2	8	22066537	A	C
Osa08LNT0415900.2	8	22066769	G	T
Osa08LNT0415900.2	8	22057809	A	G
Osa08LNT0415900.2	8	22057363	A	C
Osa08LNT0415900.2	8	22065682	A	G
Osa08LNT0415900.2	8	22065865	A	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0415900.2	osa-miR1847.1	Translation	4.5	10.228	1	21
Osa08LNT0415900.2	osa-miR812f	Cleavage	4.5	20.834	1	24
Osa08LNT0415900.2	osa-miR2090	Translation	5.0	7.38	1	22
Osa08LNT0415900.2	osa-miR2097-3p	Cleavage	4.5	16.655	1	22
Osa08LNT0415900.2	osa-miR5523	Translation	3.5	19.102	1	22
Osa08LNT0415900.2	osa-miR5523	Cleavage	4.5	14.415	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0415900.2	8	aro8-1	Physiological trait	Eating quality	RM223	RM80
Osa08LNT0415900.2	8	dth8	Physiological trait	Flowering	RG333	RZ66
Osa08LNT0415900.2	8	nan	Resistance or Tolerance	Drought tolerance	RG978	RZ66
Osa08LNT0415900.2	8	nan	Physiological trait	Source activity	R727	R202
Osa08LNT0415900.2	8	qPN-8	Morphological trait	Seed	RM223	RM80

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus