© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0416500.1
AATTAAAATGTCTGACTAGTATTTGGTGTACAGACAATTACTGTAAACACTTTTTTATCTTCGAAGAAGATTACACTACAAGCCACTGTTACCTCCACCATTTCTGCAAAATTGACACTGAATCAACCAGTGACAATTGATACATGCTCTCGGATACCCACAACAAATATTACCAGAGTCATGTCCGGTAGAAAGAAAACTTAACAATCAAGCTGTTCCGGTAGCAAGTAATATGCGAAAGCATGCTTGACCACAGTCCATGTAAAAGATATCCTCTAGCTCCGCACCAAGAATGCTCTTGGCACTCAAATGCAATAATCATCCATGCTCCTAAAGAAGACCTTGGCTTTTGGTGACACTCTTCTATATTTTACTAACTCGATAACTGCTTCTTCACTAGGCTTTGAGAATGAGCTACTATCATCTCGAAAAACCCAAAATTTAGTAAGTAGCCTAGCTCTTGACAGAACAAACTCAATAAAGTGCATATCATTTGACAAGCATGGGGTATTCCTCATGGTTATGCCATCCAGATTAGCAAACATATCGTTGGTCCCAATTGTATTGAAAAAATCTACATCTATATCATCATTCTGAGGATAATAACTTTCCATGATCTCAATGTCCAGAACTTCAATGTTGGGGCACTTATTGAGTAAAGAAAACATACATAAAATGTTAGAGACATCACAGAATTTTGTACGAAGTGTTAATTTCTTCAATTTCTCAAAAGAACATGAAAGTCCCTCCAGAGCATTATCCACTTCTGTATCCGGTATATGAAGGTCGAGCAAAACATGTCAGTAGCTGAACAAAATCACGATCGGTAGATTCATTATCAACACTGATAGTCGCCGTCTGGATGGAAGGAAGCTGCTCGATCTCCCATAGAAAATCGAACTCTAACTGAATAATCAAATCCTTGAGATTTGGTGCCCGAATCACCCACTCATCCCACTCGCCGCCTTCCATACTAACATTCTTAAGCTCCAGCGACTGAAGCAACGGAGCCGAGGAGATCATCGCCTCCAAAGTCCTCTCCCCATGGGGTGGAAAAGCGACCATGGTGAGGGTTAACACGGTGAGATTTGGGAACCCTGAGAAGTCCGAGGGCGCGGCCGGGAGGCGGCAGCTCCCGAGCTCCAGCTTGGTGAGCTCGCGGCACGAGAAGATGGCGGCGTGAAGCGTGTGGAAGAGGAAGTTGTCGGCCTCCGAGAAGATTAGGGCGAGGTGCTCGACGCCCCTCCCGGCGAGGACGACGAACCACTCGTCCGCGCGGGCGGAGCCACCGCTCTCGATCCACCCGTGGCGGAAATGGCGGACGGGGCACGCGTACCGCGCGAGGATTTGGCCGACGGCGGCGGCGGCGCCCGCCTCGCCGCTGCCCCACCCGAAGCGGATCCCCGGGGAGGACTCCCAGCGGCGGCGCCAGTCGCGGGAGAGAGCCGACGTGCGGACGGCCTGGCGGACGGGGAGGCGGCCGACGATGTTCTCGAGGATCTCCGACGGGAGGGAGTTCAGGCTCGGCTTCGGCTGCTGCGGCGCCGCCCCCGGAGACAGCCGCCGCAGCTTCCGGCGTCGGGGCGACCCCTCCATGTTTTTTTTTTTTTTTGATCGGACTCGAGAGGCGGCGGAGACGGCTCGCCGGCGAGCCGACAAGGCGGCGGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0416500.1 | 8 | 22640915 | G | A |
| Osa08LNT0416500.1 | 8 | 22641702 | G | A |
| Osa08LNT0416500.1 | 8 | 22641799 | A | T |
| Osa08LNT0416500.1 | 8 | 22643052 | C | T |
| Osa08LNT0416500.1 | 8 | 22643866 | C | A |
| Osa08LNT0416500.1 | 8 | 22643964 | A | G |
| Osa08LNT0416500.1 | 8 | 22644078 | A | G |
| Osa08LNT0416500.1 | 8 | 22644100 | T | C |
| Osa08LNT0416500.1 | 8 | 22644290 | C | A |
| Osa08LNT0416500.1 | 8 | 22645210 | T | C |
| Osa08LNT0416500.1 | 8 | 22644598 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa08LNT0416500.1 | DTM_#DNAt_MULE_japo_Os0312 | Chr8 | - | 22644521 | 22644893 | 372 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0416500.1 | osa-miR5827 | Cleavage | 4.5 | 10.62 | 1 | 21 |
| Osa08LNT0416500.1 | osa-miR5834 | Cleavage | 5.0 | 11.448 | 1 | 21 |
| Osa08LNT0416500.1 | osa-miR1437b-5p | Cleavage | 4.5 | 8.515 | 1 | 21 |
| Osa08LNT0416500.1 | osa-miR169i-5p.2 | Translation | 3.5 | 11.148 | 1 | 22 |
| Osa08LNT0416500.1 | osa-miR2104 | Cleavage | 5.0 | 12.264 | 1 | 22 |
| Osa08LNT0416500.1 | osa-miR2869 | Translation | 4.0 | 17.032 | 1 | 21 |
| Osa08LNT0416500.1 | osa-miR2922 | Translation | 4.5 | 16.21 | 1 | 20 |
| Osa08LNT0416500.1 | osa-miR5486 | Translation | 4.5 | 10.632 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0416500.1 | 8 | qPN-8 | Morphological trait | Seed | RM223 | RM80 |
| Osa08LNT0416500.1 | 8 | aro8-1 | Physiological trait | Eating quality | RM223 | RM80 |
| Osa08LNT0416500.1 | 8 | nan | Physiological trait | Source activity | R727 | R202 |
| Osa08LNT0416500.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0416500.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RG978 | RZ66 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)