>Osa08LNT0416700.2

GTAGGTGGAGTATAATAGTAATATATATTTTCTAGTTGTATACATTTGTTGATCTCGATTGAGAAATAATAAAACAGCATGTACTAAGCTTAAGTCCATATCAATCCGTACATCATTCAGGAAAAGTGCAGACAGATTCCAGCGTTGCAAGAAATCGAACAATTATACATCTTCAGTTTCAGGAGACTTGGATCACGAAGCCAGCAGCTGGAAGACTCGTCAGAGATGATCTTCAGGTTCAGGAGAATTGGCACGAACACTGGCAGCACCCACGACGTCATGGTCTACCCGAGAATCTTCTTGCACTTTGTCAGCGCTACGAACGGCAGGATCTGTAAGAGCCGACCTGGACATGGCAGGTTGGGAAGACGACGAGACTGAAGAAGAATCAGGAAATGGGGGAATAGGAATGTTGCTTTTCTCGGACAGATACTTTAGGGCCGATGTGAAGTATTCATTAGCTGCAACGCAGAATTTTAGCCTGCGCTTCGTATCTTCATGACGAGCTTGTGCTTCCTCGTTGCGTTTTTTCCCCTCCTTTTGTGTTTGTAGCAGTACCTTCTCAAGCTGCTTCTGCTGATCCACGGCATCCAGATCCAACCGATGAATTTTCCGAGGGTGTTCAACATCTAACCAGGTGCCTGATCTTATTGTTTCCAACTCATAGTTTACGCTGGATGTGTGCATGTAACCATTATTTGCAGATTCTCTATTCATGAAGATGACTTGTGCATCAGGTGAAACTCTCGGATGTTCTGTTATAATTGTCTGCTCATTACTACATGTGCTGCCAGAAGAAGGATAAACAGATAGCACTCGCAGTACTCCTGCTTTGTTTAGAACAAACTCCATAAAGTGCATCTCATTACAGAGGCAAGCAACTTTCTTCATTCGCACAACATGAAGTTTCGCAAACATATCATTGGTTGACTGAGCATTCAAGAACTCATCATTCGCATCAATATCCTGAGCATCATCGCCTTGTCCCCGCATGAAACTGCACACGAACTCTAGCTTGGTCACATGAGCCATCCCCGTCAAAAACTTGGCGTAATTGGGGCCGCACAGAATCCCTTCCTCAAGTCGTGGAAGATCCTCCACTCGTCCAGCATAAGGAAACGGAGCAACCATTATAAGCTTCCGGAGATTGGGCGCGCGAATCACCCATTCGTCGGCGCCATCGCCGACGAGCAACGCGTTCATAAGCTCCACATCCTCCAACAATGGCGACCCGGCGAACAAGGCCGCCAATGCCTTGTCCCCGTGCTCCGGGAGGGAAACTTTCGTGAGGTGTAGCTTCTTCAGGTTCTGGAACCCCTCGAACCCCGAGGGCGCGGGTGGGAGGCGGCAACCCTCGAGGTCGAGGGAGGTGAGCTCGCGGCAGGAGAAGAGGCAGGAGTGGAGCCGGAAGCTGGGCGTTGGGAACCACAGGTACAGGGCCTGGACGCCGCTGCGGGAGAGGTAGAGGAGCCAGTCGTGGAGGGCGTCGACGAACCAGGAGGGGTCGCGCGCGGCGAGGCGGAAGGCGCGGACGGGGGCGGAGCGCCGGAGGAGGACCGCGTCGACGTCGGACGCCGCGACGCCGGGGCTGCGGGTCAGGTCGACGGTGGGGAGCGACTCCCAGCGGCGCCGCCACGCGCGGGAGAGCGCCGAGGTGCGGACCACGTCGTAGATGTGTAGGCGGCCGAGGATGTTGTCGAGGACTTCGACGGGGAGCGCGCCGAGCGCATCCGGCGGCGACAACTCCGGCTCCGCCTCCGCCTCCGCCGCCGCGAGCCGCCGCTTCCGGTTGGGCGGCGAGGCTGCCATTTCTTAGCGGTTTTCCCCAAATTC

Explanation	CPC Score
noncoding	-1.06724

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0416700.2	8	22630241	A	G
Osa08LNT0416700.2	8	22631584	A	T
Osa08LNT0416700.2	8	22631916	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0416700.2	osa-miR5535	Cleavage	5.0	18.951	1	22
Osa08LNT0416700.2	osa-miR5790	Translation	4.5	16.792	1	24
Osa08LNT0416700.2	osa-miR171c-5p	Cleavage	4.0	14.216	1	21
Osa08LNT0416700.2	osa-miR2104	Cleavage	4.5	14.313	1	22
Osa08LNT0416700.2	osa-miR2927	Translation	4.5	24.493	1	23
Osa08LNT0416700.2	osa-miR5149	Translation	4.5	13.856	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0416700.2	8	qPN-8	Morphological trait	Seed	RM223	RM80
Osa08LNT0416700.2	8	aro8-1	Physiological trait	Eating quality	RM223	RM80
Osa08LNT0416700.2	8	nan	Resistance or Tolerance	Drought tolerance	RG978	RZ66
Osa08LNT0416700.2	8	dth8	Physiological trait	Flowering	RG333	RZ66
Osa08LNT0416700.2	8	nan	Physiological trait	Source activity	R727	R202

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus