© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0038600.1
AATTGAATTCAGAAGACATATTAAACTGTATTTCTTCGTGAACAATCATTACATAGCCTTGTTACTCACTACCTGTACTTATGAGCTTAGGCGGAACAGAACGAAAAAAATTATCTCCCTGTATAACGTATCTCCTCATAGTATTCCCAATCCCTGCCTGTTACAATAACGTATCTCCTCAGTGGCCTTAATCCCTACCTAACACCTGTTTATTCTATCCCTGTATAAATATTTTCAATTACAATTTCGAGCGGTTTAAATAAGATCTAAAACTTCGTTCCTGCAGCTATTCTCTGCAAGCGATTCCTATACTGCTGTAATTCAAGGAAAACAGATGCTGCCAGCGTTTTCGCTTGCTAATTAAACAATAACCTGAGCATATAACTTCTGAGATCATGCCAAGAGAGCAGAAGGCCATTTTATAACTTCGCGTGTTCAGAGAAAACTGGGAGGTCCAATGCATCCCTTGCAATGGCTTGATCTTCGTCAGTTATGGCCAATGCTTGTGATATATTTTCCGTGCTTTGGAGCTTCCGGATGTACCCAACTAACTGCAGCTTCAGGGGCTCCTCCGTTGTTATCTTACAACAGGAATCAAGGAAATATATGTGCATCACTCTTTCAACTGTCCGCAGCGAAAAGTCCCATCCAATGCTTATCACCGACCTAGATACTCCGCCTGCTTCTGGCTTGGCCCAACCAAAGAAAATTCCTGATATTTGGTCAGGAACATATTCATAGGTACAATCACCTGCTATTACCATATGAAGACTCTTTGAAATTGCATGGCCTATCTGGGCATTCAAGAATAATTGTTCGATTGGTAAAGCACCCTGAATGCCTAAAATATGAATGCCCCACATCAGAATTAGACTAATGAAAATTAAATTGAATGCAGTGGACAGGGATTAATGGAGAAAGAGTTACGATCTTCAAAAGGAGGAAGACCCCACAACTCAGGATGAAAGTCCAGCAGTGAGTAGAGGATAGAATCAGCAATTGAGTAGTGCTGCCTTTGACTTTGGAGTGATGGGACAGCAACTACTTTTGCCCCAGAAGCCCTGGCACCCTGAACTCCGACGAGAGAATCTTCTATGACCAAACATGATGATGGATTTACACCAAGTCCTTTTGCGGCCTCCAGAAATATGTCAGGGGAAGGTTTTCCACGAGGGACCTGGTCTCCACCAAGAATCACAGAAAAACAGTCTTTCCAATCTTTTAATTTTAACAGTTTGTGATCGATGTTTCTCCTGACGGAATTTGAAGCAAGTGCTAGAGGCACTCCGTTCCTATGAAGATGCTTGACAAGCCTCTCGACTCCAGGGAGTGGCTTTGCCTTTTGCCACCTTTTCAGGTACAACGGGTATATCGCCACAGCGTACTCTTCTACGGTGAGCGGTAGCCCATAATCGGCGATGATCCCGGTGGTGGACTCCCTGTACATCTGCCCCAACCTCCTCTCCTCCTTCTCCTTGTCCGGGACCTTCCCGTACGCCGCCAGGAACTCGTTCAGGACGTCCCTCGTTGCCCTCTCTGTGTCGAGGAGCGTGCCGTCGAGGTCGAAGATCACGGCCGAGACCCTGGGCGTCGTTGCCGCCATGGGCAGCGGAGGCGAGGGAGGCGATCGCGGGGGCGCGGAGTAGTCTGTGGGCGGCGGGGGTGAGTCGGGGAGGGAGCGAGTGCGGCGCGTCGGATTTAAGGGCGGGAGGAGGAGCAAGGGGACGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0038600.1 | 1 | 31836195 | A | T |
| Osa01LNT0038600.1 | 1 | 31837081 | T | C |
| Osa01LNT0038600.1 | 1 | 31837358 | G | A |
| Osa01LNT0038600.1 | 1 | 31837674 | G | A |
| Osa01LNT0038600.1 | 1 | 31837854 | C | T |
| Osa01LNT0038600.1 | 1 | 31839754 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0038600.1 | osa-miR156j-3p | Cleavage | 4.5 | 14.395 | 1 | 22 |
| Osa01LNT0038600.1 | osa-miR156j-3p | Translation | 5.0 | 20.533 | 1 | 22 |
| Osa01LNT0038600.1 | osa-miR1850.1 | Cleavage | 4.5 | 10.21 | 1 | 21 |
| Osa01LNT0038600.1 | osa-miR1854-5p | Translation | 4.5 | 6.764 | 1 | 21 |
| Osa01LNT0038600.1 | osa-miR2876-5p | Cleavage | 4.0 | 19.616 | 1 | 21 |
| Osa01LNT0038600.1 | osa-miR812k | Cleavage | 3.5 | 12.221 | 1 | 24 |
| Osa01LNT0038600.1 | osa-miR812l | Cleavage | 3.5 | 12.221 | 1 | 24 |
| Osa01LNT0038600.1 | osa-miR812m | Cleavage | 3.5 | 12.221 | 1 | 24 |
| Osa01LNT0038600.1 | osa-miR5074 | Cleavage | 4.0 | 20.941 | 1 | 21 |
| Osa01LNT0038600.1 | osa-miR5150-5p | Translation | 3.0 | 22.841 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0038600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0038600.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0038600.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0038600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0038600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0038600.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0038600.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)