>Osa08LNT0417900.2

GTCGTGCGGCCTTCTCTCCTGCCGGTCGTCGCCCGCCGCGTCGCTTCGCCACCTCACCCTCCTCCTCCGATCGTCGCCGTCGCCGCCTCGCCCTCCTGCATCCATCGTCGCCGCCACTCTTTCCTAGCAAGGCCATCGCATCGCATCAGCGTGATGGCCCCCGTCCTACTCGCCGGTTGATGTGCCCACACGGAGATGGTGTATGCAATCTCCTCACCTGCCACCGCACTGCCACTGCCGCCGCCGCCGCCGTCGATCGTCGTCGTTGCCGCTGCCCCTATTGTCCTCTCCGTTGCAGCTAGAGGAATTGGCCTCTATGGCCTGCTCTTGCCTCGGCATCCGCATGGATTAGGGCTTTGGGCACACCAAGGTCCAGCCTTCAACGGCATCTCCGCCTCGACCATGCCCTGGTAAGCTCATAGATCCAATTTATCCAGTCCGGACTGGTGCTCACTCTGCAGCATGACCCTAAACCTTCGGTGAATCCATGGAATGATCCTCTAATTCGAATCACCCACGGAAAAGCAATGGCATCAGCTCACGTGCAAACTACTGTGGCTTCTATTTGAAGGTCCAATAATAGATATAAACTTGAGACTATTTCTCTGAATGATGCGTGTGCTTATCTTCTATCCAAGTCAGTTGATCTACAGTCGAGGAGATTTCTTCTTTGAGCAACGAGGTGTCACGAAGAGCATAGCTATACGGAAATGTAGAATGTTTCCCTTGAAGTCAATGTTTCTGTGGTTCTTTTGCCTCTCCGAAGATTCAGAAAAGGGAGGAAGAGTGCTTCTTGGCTCCCCGAAAGAGATGAATCCTAGGATCCTTGAGTTTTTTTCTAATCTATTCTACAGTATGCAGGCACGATATATATGTTTCCACGTGTGGCTACTACTTTTGTCTAAGTGCACATTATTATACAAATAGACTGGAAATTATTGG

Explanation	CPC Score
noncoding	-1.04598

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0417900.2	8	23810048	C	G
Osa08LNT0417900.2	8	23810394	G	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0417900.2	osa-miR5486	Cleavage	5.0	18.09	1	21
Osa08LNT0417900.2	osa-miR5485	Cleavage	5.0	21.868	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0417900.2	8	qPN-8	Morphological trait	Seed	RM223	RM80
Osa08LNT0417900.2	8	aro8-1	Physiological trait	Eating quality	RM223	RM80
Osa08LNT0417900.2	8	dth8	Physiological trait	Flowering	RG333	RZ66
Osa08LNT0417900.2	8	nan	Resistance or Tolerance	Drought tolerance	RG978	RZ66
Osa08LNT0417900.2	8	nan	Physiological trait	Source activity	R727	R202

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus