>Osa08LNT0419400.1

GGAGTGGAATGTACTAATTTAAGTCTACAGTAGCAAATCTCGCTACAAATCATGCACTCGCACCTCAGGTTTCATTTATATAGTGCCAGAAAAGGATGAAGCTACAAGTTTCCAACTAGTTGTACAAGCATACATTGTGAGGATGAATAGGATGCCCCATGTTTCAGACCTCGCTTGCCTTTGTACATGCACTCTATAAGGCAGACCTCCGAAATCTGTTTGTTACTCTCTGGTGAAGATCAGAAAGGGCCACAGCAATTTTAGCACCAACAAGAGCATTGTTCTTTACAAGCGCAATATTGGCTTCTAGCGAAGATCGTCCAGTTAGTACTTTCACTCTGTCAAGCATGAAGGGAGTGATCGCGTTGCCTATTATATTTTTATCCTCTGCTTCCTTGAGGGCTTTCTGTATTGCAGACTCTATAGCATTTCCTGAAGCTGCATGTTCCTTGGGAATCGGCACAGCAATCAAAATCCCAGATCCTAGATGTAAATTCTTGTTTGCATATATTATCTTGGCACACTCTTCGGGAGAATCAACGCGACATGGCACCTTACATCCGCTGACTTCTGTAAAGAAAGCAGGAAATTCATTGGTTTTGTAAGCAGCAACCGTTACTCCTTGAGTTTCCAAGTACTCAAGTGTCCGTGGTATGTCCAAAATAGATTTCACACCAGCTGAAATAACAGTGACAGGAGTCTTTCCAAGTTCAGTTAAGTCTGAGGAGATGTCCATGGTCTGTTCACCATTTCTATGAACACCTCCAATCCCTCCAGTTACGAAAATTGGTATGCCAACCTTATGAGCGAAAAACATAGTGGCAGAAACTGTTGTTGCACCATTACCACCAGAGGCCACAACATGTGCAATATCCCTTCTAGCCGTCTTCTGAAACTGTCTTCCACTTACAGCCAAGCTCTTCAATTGCTCGCCGCTAAGGCCAACATGTGGCACGCCGTTCAGAATGGCTATGGTGGCAGGAACCGCCCCGTTCTCCCTCACGACGGCCTCCACCTCCATGGCGGTCTGGAGATTCTTCGGGTAGGGCATACCGTGGCAGATGATGGTGGACTCGAGGGCGACGACCGCGCCGCCGCGCGCCAGCGCCGCTTCCACCTCCGGCGACACCGCCACCCCCATCGGCCCCGTGCTCGACGACGACGACGACGGCGACATCCCACGGCGGCGACGGCTCTCCTCCCTTTCTGACTTCTCT

Explanation	CPC Score
noncoding (weak)	-0.939402

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0419400.1	8	24930140	A	C
Osa08LNT0419400.1	8	24930443	A	G
Osa08LNT0419400.1	8	24930510	A	C
Osa08LNT0419400.1	8	24930567	C	G
Osa08LNT0419400.1	8	24930752	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa08LNT0419400.1	DTM_#DNAt_MULE_japo_Os0229	Chr8	-	24932800	24933337	537

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0419400.1	osa-miR5528	Cleavage	3.5	11.978	1	21
Osa08LNT0419400.1	osa-miR160c-3p	Cleavage	5.0	18.625	1	21
Osa08LNT0419400.1	osa-miR416	Translation	4.5	19.847	1	21
Osa08LNT0419400.1	osa-miR396e-5p	Cleavage	4.5	24.493	1	21
Osa08LNT0419400.1	osa-miR1851	Translation	5.0	18.145	1	21
Osa08LNT0419400.1	osa-miR396g	Cleavage	4.5	24.493	1	21
Osa08LNT0419400.1	osa-miR396h	Cleavage	4.5	24.493	1	21
Osa08LNT0419400.1	osa-miR396d	Cleavage	4.5	24.493	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0419400.1	8	nan	Resistance or Tolerance	Drought tolerance	RG978	RZ66
Osa08LNT0419400.1	8	dth8	Physiological trait	Flowering	RG333	RZ66

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus