© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0038900.1
TGCAGTGTGTCAACCAGATATTCATTGCCCAATGTTTTGTGTACAGCCAGGAAGCTTGGGATGCAGCAACGGCGTCAGAAAACTGAATACACACACAAAGAAGTTTCCCTTTTGAAAAAATAAAGAAAATTAAGGCTAGGCAGAACTGAAAGGTTCAAAATTCAGAACTTATTAATTATTACACAAGCCAATACATCAATTACTTCTTTGCATATAAAAAGAAGTAACAAATCCGTATTGCACACAGGCATATGCAGCAAAGCCCTGCATATTTCTTGCCCTAGTTTCAGAGCAAAAGAAATTAGCAGCCAGCTAGCTGGCAGTATCTTCCTTCTTAAATCTTAACCCACAAGCTTAATTGTTCCCTTGAAAGAAATTAATACATAGATCAAAGCAATGCACACACTTGCACTAGCTAGCTTAGATTTGTTCTTTTGGTAGAGCTCATCGATCCTTACCTTGTCGACGATCGAAGAGTGTTGTTCCAGTGTGTGTACTGTGTAGATCGAGCTTGCTTAGCTTCCTGTCTGATCATGGAAAGCTCTCGCCGAGCTCAGGGACAAGCCCTGCGAGCCAAGGTTGTCTACTGTGAACTGCTCGGCCTCGGAGGAGTAGAACACCAGCTGATGATGCGGCCCTGGAGCCAAGGAAAGCAGTGAAGGGAACGGCGAGGTGTGGTGAGCCGCGGCGGCGGCCACCTGCGGCGAGCCGGCGCCGCTGTCTTGCACGCTGCCATTATTCCATGACTCACCGGCGTAGTGGAACGGCATGGCGGCGCCGGCGGCGCTGTTGACCATCCCCAGCGGGTTGTTCAGCCCCATGAACCGGTGGTAGCCACCGGCGGGGAACCTCCCCACTATGTGCGCCGCTCCGCCGCCGCCCCCGCCGTCGACGTCGTCTCCCCCTCCTCCTCCTCCGCCGCCGGCCGCCGCCGCCTCCTTCTCCGCGGCCAGCGCGGCCGCCGCCGCCGCGACGTGGTACTTATCGTCGTCGGCGTGGTGGTGGTGGCCGTGGTGGTGCATCAGCGGCATGGCCGACGGCAGGTGGTGGTGGTGTCCCATGCAGAGGTGGTCCTGCGGCGGGAACTGCAGCGGCGGCAGCTTGTCGATCTCGTGGCGCGCCGCGTTGAGCAGCCAGTCCACCACCTTGCTGGGCTGGTTGAGCCCCAGCCGGTCCTGCAGGTCGTACAGCTGGATCGCCGTCGGCACCGACAGCCGCACCCGCCGGTCGCGCAGCCCCTTCACCGTCTTCACCTTGCTGTGCCGGTCCTTGCCGCCGAACACCCGCGACACGCGCACGATCCGCGACTCCGTCTGCGCCGACCATTGCCGCGACGTCGCCACCGCCGCCGTGTGCTTCCTCGCTAGCTCCGCCGCCTCCTCCTCCGCCGCAGCTGCCGCAGCCGCGGCGGCGGCCGCTTGGTTGCTTCCTAGTATCATCCTTATCAACGCCTCCTCGAGCTCATCCTCCCATCGTCAGTCCTCGATCCACCTAGCTAGCTAGAAGAACTCAGCCATGCATATATATGGCCTCCTCCGATCCCTTCAAGTCAGCCGAGATTTCCCCTTCCCGCCGATGAGCTAGATATATATATAGCTCGCCAATTAACCCGAGCAAGAAGAAGATCCCGCCGCCGCCGAGCTACCAACCACCGGCGTTGGTGGTAGCTCCGATCAGCTAGCGTAAACCCTAGCCTGCCAGCTACAGAGCAGCAGCTTAGCTAGGTAGCGTCGTCGGAGAGAAGGATGTGGAAGACGACCTGTGAAGCTTTGTGGTGGGTATTTACACTGAGGAATAAATGATCAGCGTCGTCGCTGTCGCGTCACTGTCCTTTTACCACCATATGCTCTCTCCCTTGTTGCTCCCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0038900.1 | 1 | 32106864 | G | C |
| Osa01LNT0038900.1 | 1 | 32107399 | T | A |
| Osa01LNT0038900.1 | 1 | 32107718 | A | G |
| Osa01LNT0038900.1 | 1 | 32108217 | T | C |
| Osa01LNT0038900.1 | 1 | 32109013 | T | G |
| Osa01LNT0038900.1 | 1 | 32109213 | G | C |
| Osa01LNT0038900.1 | 1 | 32109255 | T | C |
| Osa01LNT0038900.1 | 1 | 32109619 | A | G |
| Osa01LNT0038900.1 | 1 | 32107033 | A | G |
| Osa01LNT0038900.1 | 1 | 32109634 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0038900.1 | osa-miR812q | Translation | 4.0 | 16.868 | 1 | 24 |
| Osa01LNT0038900.1 | osa-miR5813 | Translation | 4.5 | 17.604 | 1 | 22 |
| Osa01LNT0038900.1 | osa-miR166d-5p | Translation | 5.0 | 15.155 | 1 | 21 |
| Osa01LNT0038900.1 | osa-miR166h-5p | Cleavage | 4.0 | 15.155 | 1 | 21 |
| Osa01LNT0038900.1 | osa-miR413 | Translation | 4.0 | 20.7 | 1 | 21 |
| Osa01LNT0038900.1 | osa-miR1427 | Cleavage | 5.0 | 22.302 | 1 | 21 |
| Osa01LNT0038900.1 | osa-miR1876 | Cleavage | 4.5 | 6.861 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0038900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0038900.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0038900.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0038900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0038900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0038900.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0038900.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)