Transcript

Sequence

>Osa08LNT0422400.1

CCGCCTCCTCCGGGACCGTCGCCGCGGCGTCGCCCTCCCCGCCGCCGTCCGCCGCCTTGCGCTTCCGGGCGCTCGCGTCGGCCGCCTCCCGCGCCAGCTTCGCGTGTGTGGGGGCTTCGATTCGGTGGAGCTTTCCGCTTCTCTCCCCTCTCCCCGCGGTGCGTGTTCTTCTCTTCCGAGATCTCGGCGAAGGCGAGAAATA

Coding Potentia

Explanation	CPC Score
noncoding	-1.21089

Genome Browser

Expression

Axis x: Treatment
Axis y: FPKM
Value above bar: Standard deviation

Variation

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0422400.1	8	26887565	G	T

Transposon

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

small RNA targets

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

QTL

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0422400.1	8	nan	Physiological trait	Source activity	RZ66	RG598
Osa08LNT0422400.1	8	xa13	Resistance or Tolerance	Bacterial blight resistance	nan	nan
Osa08LNT0422400.1	8	Grh5	Resistance or Tolerance	Insect resistance	nan	nan
Osa08LNT0422400.1	8	qPGWC8	Physiological trait	Eating quality	nan	nan
Osa08LNT0422400.1	8	Grh5	Resistance or Tolerance	Insect resistance	nan	nan
Osa08LNT0422400.1	8	qRGV-8	Physiological trait	Germination/dormancy	RM502	RM477

pre-miRNA

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

GWAS

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus