© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0423200.1
GGAGAATGGAGATGACCTCTCATATTTCTGAACAGAAGCATGTATACATGCAAACGTGTCTATAAGGGTTTCTAGTTCTACAACCTTTCATCTATGAGAAATATAGGTTCTATAAACACAAAGCCCTTGGTTTTAAGGGTGGAACATCACTATTCTATGTTCTGAATATATCTTGTGCTTGTGTCTGTCAAGGCACCTGGGAGAACTGGTCTTGTTATCATCCACAGCTTGGGACACAGTGCACCTTGCTCTCTTTTCACAATCTTCTGCACCTACCAGCCATGCACAATTTGTATGCCCCTTCAGTCTAAAAGTTCAATCCATCTGAATTCTGAACCCTTGCACCATCAATCAAGCTCGAATCGTCCATGCTGAAGTCTTGGTAGTCAAGCAGCCAGTCTGTTGTGCTTCCATCCCATGCTGACTGCTTAACGATGCCACTGAAGTCATCTTCATTGCTGCTAGTAAAATTTAGCCATGGCTCGTCAGCTGGAAGCTCTGCCTCCAACAGCCAGTTCACCAATGGGTCCAGGCCATGACTGCTGGTGTTCCTGCTTGACTGCTCCATCGAGTCTGTGGGCACTGACATGTCCCTGCTGCAGCCTCCCTCGGGATCGAACGGATATGCCATACCATTTGACTTGGCTGATTCGGTTGTGGCAGTGGACAGCGTGGAGGTTCTTGTTTGGCTAACCACCTTGGTGTTGGGCAGAGGCTGATGTGTGGCTGGGTCGATGCCCATCTTGATGAGCTTCTTCTTGATGTGCGTGTTCCAATGGTTCTTGATCTCGTTGTCTGTTCTCCCTGGTAATTTGGCGGCGATCTTGGACCATCTGTTACCAAGCTTGGCATGGAGGTCCACAACAAGCTGCTCCTCGTCTGCGGTGAGGAGGCCACGCTTGAGGTCAGGGCGGAGATAGTTGGTCCACCGCAACCGGCAGCTCTTGCCACAGCGCAGCAGCCCTGCCAACTTAGGCACTGCTCGCCAGCAGCAGCGGCCATGTGTCAGGATGAAACTGATGAGCTTCTTGTCCTCCTCTGCCGTCCATGGCCCCCTCTTCACCTTCTTCTTGTCACAGCACGGCTGCCTCCCCATTTGCTAGTTACTGCAGACTTGCACCAGATAGATGGAATCCTGTATAAAATGAACACTTATAAATTTCTAGTGCTTGCACATGTCCAGTGAGCTGCAAAACTCCTGTGCACAAGCGTCAGATGAAAGGGTGGTGACAGCTCTGTTGCAACTGCAATTGGTGTCTGTGCTTGCATATTTATAGGTCAGCTCCTCACTTCCTCAGTTTCTCGAAAAAAATGTGTCTTTCATGAATTTTGTGTGGTGGTGATGATGATTTGGCTTAATTTAGTGTGCTTAGAAAGCAAGGCCTCAATCCGTGCTACAGTAGACTTGCACCCAAAAATCCACATATATGCATTGCTGCAACGTGGTGCATCTACAGTTTAGTTGTTGATCGAATTTACAAATTAAGTATAAAAAATATGTACTATTTTATTAGCACAGCAGCAATTTGGTCGCACATGATGCTACAGGAAACTCAGATGTGATTTTCTCTGGAATGAAGTTGCATTTTAACTAGTATTTTTAAAGCTTTTGCTGCTTTCATTTCCCACAAGGCTACACATTTATGCTGCCTTTGCTACCCACCTATGTAGCCATTTCGTCATCAGCTGTGAACTATAGCTAACTGCTAACCAAAGTACCAAACCATTTGAGGAGCCCCCCTAACTTCATGTGATTGCTGTGAGCTGTAACTCATCGTATGGACCAGAATAATGACTTTGAGCACATGGTGGTGTATATTTTGCTACAGTAATATGTAGAAAAATAATCACGATCAGTGACTCCAGTGGTGAAAATTGTCATACAAGATACAGGCAATTTAGGATGTCATAGCACTGAATTTCATGACATCAGCTTTCAGTAGGCAAGAACTCAACCAAGTGATTTCTTCTGGCATACATGTACAGGTGCAAATTGTTTTTCTAGGGCTTGTTCGGTTAATACCGAAGAGGAAGGGATTGGAGGGGATTAATTCCACACCTCAATAGGTGTGGAACAAATCCCCTCTAATTCCCCTTCAATCCCCTTCTAAGAGGGATTAACTGAGCAAAGCCTTAAGGAACCAATGCTAAGTCTGTTGGGGAAAAAAATTACAAGTATACCTGGGGCTGGGACATACTTTGTCAATAGCAACACTGAAGATGGAAAGAGTCACAAACATAAAAATATCAACCATGTCATATATCAGCTTCCTCGAATATGCAATTACTCATTTACTTTACGATCAACCAGAAAAGGCTAGCCTCCAATAGCTCTGCCGATATCTAGGCATTAAAGCATATCAGGAAAAACAGTAACTAATTGATTTGAGTTGAGAAAACAGTGCCCACCATCAGTAACTTTCAAGTACCCTGTTCCATCAAACAACTGATTCAATGTGCAAGATAACTGATTATTTTGTAGCAGGATACAAAATGGAAAACTAGTGAACTATGAACTGTATGATCTAGGCATCTAACCACACTCTTCAGATCCTACTCACCACAGGAACGGGAAAAGAAATGGATAATTGTACCTTCACCCAGAAATGACAGCAAGGGATAGCTTATTATCTGTGGGCACACAACAGAATCTGCCGACATGAAGAAGAAAATGACCTTGTGCGAGCGGAGGCGCGGACTTCGCCGAGGTGGCGGTGACGGCGACCTCGCACCCTTTCCCTTCCCCCACCACCGGAGGAGGAAGGGGAGGGCGCCGTCGGAGGGGAGGGCGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0423200.1 | 8 | 27488019 | T | G |
| Osa08LNT0423200.1 | 8 | 27486600 | T | G |
| Osa08LNT0423200.1 | 8 | 27487029 | G | A |
| Osa08LNT0423200.1 | 8 | 27487035 | C | T |
| Osa08LNT0423200.1 | 8 | 27487450 | A | G |
| Osa08LNT0423200.1 | 8 | 27488252 | A | C |
| Osa08LNT0423200.1 | 8 | 27488798 | C | T |
| Osa08LNT0423200.1 | 8 | 27486521 | A | C |
| Osa08LNT0423200.1 | 8 | 27490574 | A | C |
| Osa08LNT0423200.1 | 8 | 27490588 | A | T |
| Osa08LNT0423200.1 | 8 | 27490738 | A | G |
| Osa08LNT0423200.1 | 8 | 27491019 | T | C |
| Osa08LNT0423200.1 | 8 | 27491416 | A | C |
| Osa08LNT0423200.1 | 8 | 27491591 | T | C |
| Osa08LNT0423200.1 | 8 | 27491666 | A | T |
| Osa08LNT0423200.1 | 8 | 27492292 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0423200.1 | osa-miR5543 | Cleavage | 4.5 | 13.761 | 1 | 21 |
| Osa08LNT0423200.1 | osa-miR171h | Translation | 4.5 | 19.585 | 1 | 21 |
| Osa08LNT0423200.1 | osa-miR171i-3p | Cleavage | 5.0 | 19.063 | 1 | 21 |
| Osa08LNT0423200.1 | osa-miR1849 | Cleavage | 5.0 | 15.047 | 1 | 21 |
| Osa08LNT0423200.1 | osa-miR1857-3p | Cleavage | 5.0 | 16.151 | 1 | 21 |
| Osa08LNT0423200.1 | osa-miR2094-5p | Translation | 4.0 | 22.715 | 1 | 21 |
| Osa08LNT0423200.1 | osa-miR2097-3p | Cleavage | 4.0 | 14.301 | 1 | 22 |
| Osa08LNT0423200.1 | osa-miR5521 | Cleavage | 5.0 | 9.231 | 1 | 21 |
| Osa08LNT0423200.1 | osa-miR5076 | Cleavage | 4.0 | 12.63 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0423200.1 | 8 | nan | Physiological trait | Source activity | RZ66 | RG598 |
| Osa08LNT0423200.1 | 8 | Grh5 | Resistance or Tolerance | Insect resistance | nan | nan |
| Osa08LNT0423200.1 | 8 | qPGWC8 | Physiological trait | Eating quality | nan | nan |
| Osa08LNT0423200.1 | 8 | Grh5 | Resistance or Tolerance | Insect resistance | nan | nan |
| Osa08LNT0423200.1 | 8 | qRGV-8 | Physiological trait | Germination/dormancy | RM502 | RM477 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)