© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0423300.1
GATGTAGAAAGCATACAACCCAACCGAGCCTTCCAAGAATTTTATTGATGAATTTTCCCCAGACAAACTGACACAAGGATAGTCATATGTAACAGCTGCAATATGGCTGATTGGTTCATATCTGTAAGATGATTATACATCAGAAACCAACCACACACACACACAAATGAAAGAAGGGAAGCATCAGAAGCTTCAGTGAAATCAGTGCTGGGGAGCAATTCCTCTCCAAACAAGTCAACCTCCTGTACTACGTGTTCTTCTACCTCCATGTTGTCATTGTCATCGTATGGGCCATCGTTTTGCCGGTCACAATGTGCAATTCTTTCAGGTACCTAGAAGGCCGAAGGATCGCCGTTCAGATCGGGGAGCTAGTGTGAAGTTCAGTCCAAACATCTCCTTCAGTGCCTGTGCTGGCTCCAGCAGCTCAATCAGCTTCGCAACAAGGGATGCACTCTCCCTGATGTGTTCCATATCGGTCTGCGTCCAGACGAGACGAGATAGCTGCAATCTTCGCTGTTTCGAGCTCAGATCGATTCCCCATCTAGCGTAAACGCGCTCTTTCTCCCCATTGGTGAGCTTCTTAAGCATCTGCTTGTAGAGCATGTCCCTTTCGCGTCGAAGATTTTTCAGGCTTGATACGACGGCAGAATTAAGCTCGCCTCCTGCAGGGCTGGCACTGAAGGACCTCCTAATGAAGGACAGTCTCCTGTGCTCCACCTCCATGTAGATGTTATCTGCTGGATCTCCCTTGAAGAGGAGGAAGAAGTAAGTTCTGTGTACGATGGGAGCGTTGCATTCGTGCCACAACTGAATAATCTCTTGCCGCATCTTCTCAAAATCAATAGGCCAACGAGAAGGAGAGGCACTCAGTGATGAATCTATGCCAACATCTTTGACAGTTCTCAAGGTTGTAGATCCATCTCTAATAGACTGCTGATCCTGATACTCATCAAGTTCATCCTCATGGTCACTATCAGTCTTCTTCAACTTGGTGAGACAACTGATGTCACTGGTGAGAGTTTCTTGTTCTGCGTCGCTGGGGCACATGTCTTTGGCTACTTCATCAATGGTGCTCATGTCCTTCACTACTTCATCAGAAGAAACTTCACCAGAAAACTCAGAACGGTCTACTGAAGAAGGGTTATCATTTTCTGGATACAAGCTTCTCCTAACCTTGTCAAACCTTCTTGGGGTATGCTTCAAGATTTCATTAGGTGGTGTCTGGCTGGTGTACTCGGAATCATCAAACCAACTATTTGGAATAATCATAAAGCTAGCCCTGCAGCTTTTACTTCTAGACAACGCCCTATCCTTGGAGCTCAGTATACACCTTTTTACAGTCAGACATCCATTAGGGTAAGGTTTCTGAATGTCAAAAGAAATGTTAGAATCACATGTATATAGCTTGACATCATTGTCTGTGGTACCATTAGATTCACATGTATCTACGATCTCATCTTGTTGCTCCTCCTCGACAGGGCACATCCTGGTAGGATCTTCCATTCTGTTTGTTATGCTCTCAAGTTCTTGGTCTTCATCAGGTTGAGGGACTGCTTCTTTGGAGATCTCTAATTCAGGTGTTTGGAACTCGGTGTCCTGGGGCAGCAAAAGGTCGAATTTGTGACTTGTGCTTCTTCTATGCTCATGTATATCTATGCATTGGACTTCTCTACAATGCTCTTCAGAGACTTCTGATGCAGTTCTGGAAGCCGCTTCTGTCATATGATATGACTCTATGCAATCAGAAGAACTATGGTGGCTGGGAGGGTGCCAAGGTGACATAAATTTTTCATGCTTTGTTTCTTCAGGAAGATCCACTGTTTGAACAGGGAATACAATATCATCACGGTCATCACTGAAGACATAGGATCCATTAAACACAGCATTATCTTGATCCTGGTAAGGAACACCAGAAGTATCTGAAACTGAAAATGCTTCTTCAGACGCATTCCGTGCAAAAGACTCTGAGGATCGACTATGCTCATCCCATCGCTTCGCAACGCGGCCGTCACTATGGTCATCACAATCGCTTTTAAGCAAGCAGTCAAGTTGAGACTTCACAGTATCTCTTTCTTCCATCAATTCTTTTAGCTGTTTCTCCAGCTTTTTAATTTGTGCATCCTTCTCCCTCAATGCTTCAGCATGAGTAGTGCAGGAGGCTGGCGCCGGAAATTTAATCTCACTTTGTAATCTTTCAAGTTCTCTTTGTAGATGCTTCACGAGTGCCTTATCAGACATCACTACATTGACCTGTGCATTTGTAACTACCTCCTTTGCACAAGTAGCAAACAATAGTGTATTCCTGGATTGCTCAATATGACTCCGTGCAGGGCTCATTGTGCAGATAATAGCAGTTCTTGCATTGCCTCCCAAGGAAGACTGTAATATACGAGTCAGCTTTGAATCTCTGTAGGGGATATGGCCATTTCTTCCCTTACTGAGTTGCCGAACAACTTTTCCCAGTGTAAGAAGACTTCGATTGATATGGCTACCTTCTTTTAACCTCACTCCAGCTGAAGCAGTCTGAGATGCACGCTCGCTTCCTGCTAGGTCAACAAAGTTCACACAAGCTACAAGGGTGCTTGAGTTGCCTCTTCCCAAATACTGTCTAGTAGAACTTTCAATTGTCAATCTGAGTATTTGATGGGACCTTGAACTCGTTTCATTCAAAGCAGTTTCTCCAATCTGCCTTTGAGCTTCACACACAGCAAGAAGGTTCCTAAGATGATCCTTGTCCCTCAAGGTTTCCTCAGTGAGTTTCTCTACGGTAGTTCCTTTCTCCGGATCATCAAGAAGTCTGAGGGGTGTGGTGTCGTGGCTCAGGAGGTCCCTCACAGCTTCATTGTATATCTCTATTGCCGAAAATCTCAAAATGAATTCTCTTTCAGGATGCTTTTCGATGTAGTCATAGATGTCGAGAACACTATACTCGGTTATCCCGGTCATCGTGTAAGTCTTGCCACTGCTTGTTTGCCCATACGCGAATATGCTTGAGTTGATTCCACTGACAACTGATAGAGCAACTTCTTTCGCTCCTTCCTCGTAGACCTGCCTTGTAGAGGAATCAGGACCAAACACCCTATCGTAGGTGTAGGCGGTGGGGAACATGGCGCGCTCGGGGACGGTGCTGCGGAACATGACGGTGGTGGGGCTGATGCACTCCCAGTCGCAGCTGTCGCCGGCCTCCCTGCCGTTGAGCGGCCGCAGCCGCACCGACACCATTATCCTCTCCTCCTTGGCCTCCGCCTTGTCCCATGCCGCCGCCGCCTCCTCCTCCGCCGCCCCCATATCTCCTCCCCACCTGAGCGAGGTGAGGTGAGAGCTGAAGAAGACGACGACCAATGCGGCTGCAAGCTTCTTCGAGCTTCTCTTGTCTCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0423300.1 | 8 | 27436280 | A | T |
| Osa08LNT0423300.1 | 8 | 27436889 | T | G |
| Osa08LNT0423300.1 | 8 | 27437831 | A | G |
| Osa08LNT0423300.1 | 8 | 27438396 | T | G |
| Osa08LNT0423300.1 | 8 | 27438803 | T | C |
| Osa08LNT0423300.1 | 8 | 27439006 | C | A |
| Osa08LNT0423300.1 | 8 | 27439266 | A | T |
| Osa08LNT0423300.1 | 8 | 27439565 | A | G |
| Osa08LNT0423300.1 | 8 | 27440924 | G | A |
| Osa08LNT0423300.1 | 8 | 27441699 | G | A |
| Osa08LNT0423300.1 | 8 | 27441742 | T | C |
| Osa08LNT0423300.1 | 8 | 27441849 | A | T |
| Osa08LNT0423300.1 | 8 | 27442238 | A | C |
| Osa08LNT0423300.1 | 8 | 27441598 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0423300.1 | osa-miR5536 | Cleavage | 4.0 | 13.595 | 1 | 22 |
| Osa08LNT0423300.1 | osa-miR396a-3p | Cleavage | 4.5 | 18.535 | 1 | 20 |
| Osa08LNT0423300.1 | osa-miR396b-3p | Cleavage | 4.5 | 18.535 | 1 | 20 |
| Osa08LNT0423300.1 | osa-miR396c-3p | Cleavage | 5.0 | 17.167 | 1 | 21 |
| Osa08LNT0423300.1 | osa-miR164e | Cleavage | 4.5 | 19.284 | 1 | 21 |
| Osa08LNT0423300.1 | osa-miR1861b | Cleavage | 4.5 | 16.366 | 1 | 22 |
| Osa08LNT0423300.1 | osa-miR1861d | Cleavage | 4.0 | 16.366 | 1 | 22 |
| Osa08LNT0423300.1 | osa-miR1861f | Cleavage | 4.5 | 16.366 | 1 | 22 |
| Osa08LNT0423300.1 | osa-miR1861i | Cleavage | 4.5 | 16.366 | 1 | 22 |
| Osa08LNT0423300.1 | osa-miR1861l | Cleavage | 4.5 | 16.366 | 1 | 22 |
| Osa08LNT0423300.1 | osa-miR1862a | Cleavage | 4.5 | 14.848 | 1 | 24 |
| Osa08LNT0423300.1 | osa-miR1862b | Cleavage | 4.5 | 14.848 | 1 | 24 |
| Osa08LNT0423300.1 | osa-miR1862c | Cleavage | 4.5 | 14.848 | 1 | 24 |
| Osa08LNT0423300.1 | osa-miR5500 | Translation | 3.5 | 18.023 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0423300.1 | 8 | Grh5 | Resistance or Tolerance | Insect resistance | nan | nan |
| Osa08LNT0423300.1 | 8 | qRGV-8 | Physiological trait | Germination/dormancy | RM502 | RM477 |
| Osa08LNT0423300.1 | 8 | nan | Physiological trait | Source activity | RZ66 | RG598 |
| Osa08LNT0423300.1 | 8 | qPGWC8 | Physiological trait | Eating quality | nan | nan |
| Osa08LNT0423300.1 | 8 | Grh5 | Resistance or Tolerance | Insect resistance | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)