© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0423900.2
CCCAACGTAACTAAACCAATTTTAATGAAAATAAAAGAAAGAAAGAAATGTCCCTTATCCCTTTTACATCCTGCATTATACTGTTAACTGTATGAATCTATCTCCTTCTATATACAGCTCGAAGGACTGATTTTCAGTCCCAGTAGCTACTAACCAGTTGCTAACTCCTCTAGTGAAGAACGCCTAATGCCCAGTTAGAGACTATTACAGAGGTATTCCAAGAAACAACAACAAAGAAAAAAAAAGTGAGCTTGGCGTACTTCATGGCAAAATGGTTAAAAGCATGTATCATTTGATTTGCTTTCCGCGCATATAGCTTGATATTAGTGCAGCTGTGCAGGACTTGGAGGCGCCAACTTGTGAAAAAAAAGTATTGGCAGCTGCCAAGTGCATTTGGATTGGCATGGAGAGTCGAAGATCTCCTTCCTATTCTGAACCAAAATAGCTGTCTTGTACCGATAGCCGGTCGAAGGCATCAAAATTTGCCTTTAGACCAACAAACTGGCTTCCAAGCTGTGCACACGCTGCATCAGGCCATCTACATCCTTCCCTGGTGCGGAAAGGGCAGAGTGACTCACAGATATGGTTGCTTGGTGTTTCTGAAACCAAGCTGTCCTCAATCGCGGTGATGGATACAGAGAAGTCGGAACTTTTTTCGTGCTGGGACTCAAAATCTGTGTCTCTTCGAAATGAATATGTCAGCCCCTCAGTTTTCTCCACCTGGCTTTCATTCGTGCCGAAATTAACCGTACAGCCCAACGATCGCACTGCCTTTCTGATGGCAACGCTCTCCCTTTGAGCACGTTGAGCCATGGCCAAGGCTGAACTACTTGCACGCTTCTCCCTCTGTAATTCTAATTGCATAGATTCCATCTTCGTTTTAATATCTTTTACCCTTGATTCAGCTGTGTCCTTTGCCTTCATTGCTTCTGTGTACTTTTTATTCATGGCATGCCATTGAGATTCAAGATCACCACCTTGAGATTCAATGGGGCATGTCCATCTCAAATAAAATTGGGGCCAAAGGGTAGGAGCAAGTGCTGCAGCAGGTGGCACTAGGGGACCATTATGCTTTAATGGATCATAGAATGGATTACGATGCTTATGGAAGCTGCCACCAGAAGCTCGGAGATCAGCCAAGTACGTCCACATGCAATGGCAAGAGCTTACAGCACCAGATTGCTCCCTTTCTCGCTCACTATTGCACAAGAAGTTCCCAAAGCGGCATGACAACACACAATCCATAAAGTCAACAAGGAATTTAGATGAGAACTCAAATGCAGATGGATACAAACGTAACAACTGAGAAATACAATCCAGCCACTGAAAAATAAGATATGAGTGTTCTGAGGTGGGTTAATACAAGTTTTGAGTGATACAGAAACAATTGATATCTTAATCACAAGATATTCACTGCGAGAATTGCCAAATGGATAATGGTTCGCATTGTTCATAAGGAAGATTATTAAAAAGCCAGAATGCAGTCACTTGAATGTAGTAGTCACTATAGCACCGCCTGTTATTAACTAATAATTTCAATATAAAAATGGAAACCATCTGCCATGCATGATTTGCGAGGGCGTGCAACTTAATCCTAAATGCTGAGCGGTCTTCAGACTCTTCAGTGCTCAGTTTGTACAATACAACTCCAGAAGAGTATTAGCTTATGCTTACCCTCACAAAAGAGTATAACATCTGCCATACAGGCAATAAGGAAACCAATTACAGAATCAGAAAAGGTTGATTGTGTATGAGAAAATAAAAGAAGAAAAAACATTATTCATTTAGCTCACTGTTGGCAGTTGCTGATGCTTGTTTATGAATTGAGGTACATTGGGAGAACTGAGACTCAGTTACATCAAATAAATTTGACTGGAAAAGTACTGTTTTAACACAGGGCGCCCAAGAAAGAATAGATTACCTGTAACAGTATGGGTGAAGAGTTGTTTGATGTCTGGGATTGACCAGAAGTAGTATTAGACGTTGACACTGATGATCCTAAAGCACCTCTGTTTGGTGAATTGCTCAAAGTCCCAAGAGAAGGTTGTCTTAGCAGCTCAAACTGTGATCCACTATTATTATCAGTTATCGTTGGAACTCCCATTCGCTCTGCAAATGGATGGCCAAATGCTAGCCAATCCTTTTCCACAAGGGCCTGGAACCCATTGAACGTTCTATAATATGGATCAAGCAACAAACAAGCAAGTGCAACCAACTGAGTTGTGCGGTCCCAACCATCACTGCAATGGACGAGAACAGAAGCTGATTCTTGGACAATTTGTGCAGCAATCCACGAAGCACCGACCATGATACTCTGGATATGGTTTAGCCACTCCCCTAACATTGAAGAAAATTGTGTCATGCTATTCAGATTCCCTCCACCCCAGGTTGATCCACGATTTCTCTGTGAGAAAAAAAGATCGTCAATCTCCTCTTCTTCTGTTTTGTCATTAATGAACTTATAGGCATTTCAGTATGATAAAAGTAACACTTGGGACTTATCCGGACCAACTTTACATGTCTTCCGTTAGTCAAAAAATTCATAATGTGTACTATATTTCTAATTCAGAAATAAAGGGTCCCAAGTTCTAACTTAAGAAGCTACTTCATAGTACATATTTAACTAAACAATGTAAATTGCAGCTAGGGAGGCAGGTAATGGATTCAGATACGTAAGAAAAGGCTGGCACCAAGCCCACGTATGGAGAAGCCTACAACTGGCCCGGTCTCCAACAAGAGATACAGCTGATGATGTTCCATTTGATGATACTGATCCATGGGTATCAACATAGTCCCTAAGGCGAAAAAGACTATCTCTCATTGTGTGGATATTTTGTATTCCTAAAAAGAGAACCTCAGATCTTGGGTAGTTTGATGCTGACTCTGAGCCACCTCCCTTTGCACCATTTGCTAAAGCATTTGCTCTTGGCCGGGCATCAACTATATATAACTTCCTTAGAGACCCAGTGGCATCAATAATTTGGGTGCAAAGAGCAGAAACAAGCTTCTCATCGGTATTGTTCCGAAAATTCATCATCAATCCTACCAATGGCTGAGATGACCTTGCCAGAACAGCTCCAGACCCAGGGTCACACCACGAAATAACAGGCAAGCGTCTGCCGGATCGGAAAGAAGAAGCTTGCAATAAATCTTCATCACTTATGCTCCTTGGCACAATCAATGCAGATGGGTACGTCGAACATAGTGAGTAGGTGGAATTTACTTTACTTACCCTCCACCATTCATTACGCAAGTCTTTTTCGAACTCGGATCCACTATGCGGGAACCATTTCCTAAAAAGGCGATGGTATTCCTTCAAGAGCCGCATCTTTGGATCAGATTTCTGATAAACAGTGGAGGGATCACAAGAAAATGCATATAGATCCCACAGATGAGTAGGTTTGCTATATCTTCTCAAAGCATCAAACACTTCGTTTTTCTGCTTGGTTTTAGGAAGAAAATCGAACACAATGACCCTCATGTCTTTACCGATGACTTGAAGAAGTTCACGGGGCTGCTTCTTATCATGCTGGCGGGGCAAGGGTTGAAGCTTTACGTCATCATTTATCTTCTCAATTGCAGTTAGTGGGATGGTACCCAACTCTATAACGCCTTTTGTGGCTTGGCTCACAAAGAGAAGTCGGAAATTTGTCACTGAAAGAATGCCAGCCTCATCTGTGTTTAGTAGAACAACACCATGACCCTGGGCGTAAACCTCCTCATCCTCGAGGAGGAAGTCCTCCATGCCCCGGGACGAACTCCGCGGCGGCCTCGGCTCCTTGATTTGGTTCCAGTCTATGGCGTCCCAGCTGCCGGAGCCGTCCATCTCCGGCGGCGGCGGCGGCGGCGGCGGTGGCGCCCGCGGCTTCGCGGCGTCGCGGGCGACAGAGAGGGAGGGAGCGCTCCGTCTCGTCCGGCTCGTGTTTGGTTTGGGTTGGGTTTGCTTGTCGTGAGAGGGAGGCGACGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0423900.2 | 8 | 27859741 | C | G |
| Osa08LNT0423900.2 | 8 | 27859698 | T | C |
| Osa08LNT0423900.2 | 8 | 27860054 | A | T |
| Osa08LNT0423900.2 | 8 | 27860181 | T | C |
| Osa08LNT0423900.2 | 8 | 27861060 | T | C |
| Osa08LNT0423900.2 | 8 | 27862391 | T | C |
| Osa08LNT0423900.2 | 8 | 27862583 | G | A |
| Osa08LNT0423900.2 | 8 | 27863150 | T | C |
| Osa08LNT0423900.2 | 8 | 27863970 | C | A |
| Osa08LNT0423900.2 | 8 | 27864488 | T | G |
| Osa08LNT0423900.2 | 8 | 27865057 | T | C |
| Osa08LNT0423900.2 | 8 | 27865156 | A | G |
| Osa08LNT0423900.2 | 8 | 27865192 | G | T |
| Osa08LNT0423900.2 | 8 | 27865227 | A | G |
| Osa08LNT0423900.2 | 8 | 27865863 | A | T |
| Osa08LNT0423900.2 | 8 | 27867196 | A | G |
| Osa08LNT0423900.2 | 8 | 27867763 | A | G |
| Osa08LNT0423900.2 | 8 | 27865792 | A | G |
| Osa08LNT0423900.2 | 8 | 27860055 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0423900.2 | osa-miR5543 | Translation | 4.0 | 18.922 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR5797 | Cleavage | 4.5 | 8.419 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR5800 | Cleavage | 5.0 | 23.821 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR160a-5p | Cleavage | 4.5 | 10.008 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR160b-5p | Cleavage | 4.5 | 10.008 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR160c-5p | Cleavage | 4.5 | 10.008 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR160d-5p | Cleavage | 4.5 | 10.008 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR160f-5p | Cleavage | 4.5 | 10.008 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR168a-5p | Translation | 4.0 | 18.347 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR415 | Cleavage | 3.5 | 9.585 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR816 | Translation | 4.0 | 10.899 | 1 | 20 |
| Osa08LNT0423900.2 | osa-miR1425-5p | Cleavage | 5.0 | 17.766 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR1429-3p | Translation | 3.5 | 15.475 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR1429-3p | Translation | 5.0 | 15.083 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR1846a-5p | Cleavage | 4.5 | 22.412 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR1846b-5p | Cleavage | 4.5 | 22.412 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR1846c-5p | Cleavage | 4.5 | 22.412 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR827 | Translation | 4.5 | 15.945 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR2095-3p | Cleavage | 4.5 | 17.018 | 1 | 20 |
| Osa08LNT0423900.2 | osa-miR2870 | Cleavage | 4.5 | 18.462 | 1 | 21 |
| Osa08LNT0423900.2 | osa-miR2874 | Cleavage | 4.5 | 14.394 | 1 | 24 |
| Osa08LNT0423900.2 | osa-miR2925 | Cleavage | 4.0 | 23.463 | 1 | 19 |
| Osa08LNT0423900.2 | osa-miR5076 | Translation | 4.5 | 10.54 | 1 | 22 |
| Osa08LNT0423900.2 | osa-miR5486 | Cleavage | 4.5 | 14.091 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0423900.2 | 8 | qRGV-8 | Physiological trait | Germination/dormancy | RM502 | RM477 |
| Osa08LNT0423900.2 | 8 | qPGWC8 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)