>Osa08LNT0424500.2

TCCAGATAGAGCCATCGCGTAAGAAAGAATTGCATTACTTTTGGGGTCTGCGATACTATAAGCAACAGAGTTTTGTACCAGTCTAAAAGCAGCCTTCTTTTACTCTTGCCACATAAACATATTCAGTTTAACTACACTTTTAGCACCCTGTGTGGATGTCATGTGATGAGAGGCAGGACCGACTGACTTGTTCACTCACGGGATTATTCAAGCTGCCAGGCTCTTTGAAGCTATCTCGTACACATTCTCTGATAGCCCATTGGCTGACACGATCATCTCCAGCTGAGCCTTAGCAAGAGCTTGTCTGCTCTCATCATATCGCCTCCACCGAGAGAAAGCTGACACCATGCGGGAGGCCACCTGAGGATTTATCTTGTCTAGCTGTAAAACAACTTCACCCAAGAACTTGTAACCAGAGCCATCTTTTGCATGGAAATTCACAGGGGACCCACAAAATCCTCCAATTAGCGAATACACCTTGTTCGGATTCCTCATGTCAAAAGCAGGGTGACCAAGTAACTTTTGAACGTTAGCAACATTTCCAGGGATGTCTGATGTAGCTTGAAGAGCAAACCACTTGCTTACAACCAAATAATCATGCTGCCATTTGTTATAGAAGTCCAGAAGGGTGTCATCACGAACTTGGCCTGGATTTTGAGACAATGCTGCTAGTGCAGCAAACTGCTCCGTCATGTTAGTAGCAGACTTGTATTCAACAAATGCAAGTTCAGTGGTGTCCGGTTCATTCAGAGATGCAAGATAAGCAAGGCATGTGTTTTTCAATGCACGGCGGGCCATGCTATCATGGTTAAATGTATAAGCTTCAGAACTTCTGTTATTTGTCACTGTTGAAAGAAGGTCATCTTTGAGTTGAAGGGCAAGCTCCTTCTTAATAAAGGTACGGACAGCATGAACTGCATCAGGATCTGCAACTGGCATCATATCCATAATCTCCCCTTGACCCGGCAAAGTTATCGCTTTCGCAATGAATTCTTTATCCAAGCTTGTGTTCCGCAGGATTGATCTAAGTCCATCAACAAATTTAGGGTTCAGGGCCAGTGTTTTCTGTTGCTGGAAGTCAGCTACAAGACTGAGCATCAGTTTACGTGACAGCACCTGACCAGCTTCCCACCTGTTAAATTCATCCGAATCATTGGCAAGTAGGAAAAACAAGTCACTCTCAGTCAGATCAGAATCAAGACGAACAGGAGCACTGTATCCCCTCAACAAGGAAGGCACTGGTTTCTCAGGTATGTTGTTAAATATGAATTCTTCCTCCTTCTTATTAAATTGAAGAACAGTAGTGAAGACTGGCTGGCCATCACTAGTGAGTGATTGGAGCATCCCATCACTGTAAATGGAAGTTAGGGGCATATCCTTTCCGGTAGAATCAACAAGTCCGACAGCAATAGGAATGAACATCGGCTCTTTAACTGGTTGGCCAGGGGTAGGTGGCACTTCTTGACTAAATTTCAGAGAAAATGTCTGAGAACTTGCATCGTATGAAGAGCTCACTTTAACAGTTGGAGTACCTGCCTGAGAGTACCATTGTAAAAAGTTTGGCAGCTGGGTGTTATTTGCATCACACATTGCAGCATAAAAGTCTTCACAAGTCACAGCTTGCCCGTCGTGCCTTTGGAAGTAAAGATCCATGCCCTTTCGAAACCCTGAAGCTCCAAACATGGTCTTGTACATTCTAACAACTTCAGCACCCTTTTCATAAACCGTTACTGCCAGGTTTTTCACGTTCAAATCACCACACAAGATTCAACAAATAATAAGGTTGGAGGTTCACCAGGGCATAAAATGATTGAAAATAATTAGCTAATGATGTAGTACTTCTCATTAGATGCACATCATACTTCACAGACAGAGCAACTCACCGGTATAAAAATTGTCCATCTTGATATACGAATGCGGACGAATAGGATGCGCCATAGGGCCAGCATCCTGTGGAAATTGATAGGTCCTGAGTTTAGAAACATCGGCTATACGTTTTACTGTGCGACAACCAAGATCTGATGAGAATTCCTGATCCCGGAATACAGTCAATCCTTCTTTCAGAGTGAGCTGGAACCAATCACGACAAGTCACTCTATTACCAGTCCAGTTGTGGAAATACTCATGTCCAACGACACCTAAAATTGCAGCATAATCCCCATCAGTAGCTGTCTCTGGTGATGCCAGCACAAGTCTAGATTGAAATATGTTTAAGCTCTTGTTCTCCATTGCTCCCATATTGAAATCTGGAACAACAACAATATTGAACAAATCAAGATCATATTCAAGGCCAAAAACCTCCTCATCCCACTTCATAGCTGCTTTAAGAGAATACATAGCATGCGCTGTCTTTGCTAAATCTTGACCAGGAGTCCAAATTCTAAGTGTTACTTTTCGGCCAGAACATGTAGTAAATGAGTCCTCCCTGCAATCCAACTGACCAGCAACTAAAGCAAATAAGTAGCTTGGTTTCTTGAAGGGGTCTTCCCACAATGCATAATGCTTGCCACCCTCAAGATCCCCCTGCTCTATAAGATTCCCATTGGACAACAGTACTGGATACAACGTCTTATCAGCTTCGATACGGCAAGTATATGTTGCCATAACATCTGGACGATCCTGAAAGTATGTAATCTTCCGGAACCCTTCTGCTTCACACTGGGTGCAAAAATTGCCAGTTGACTTGTAAAGTCCCTCCAATGATGTATTTAGCTGAGGATATATTTCTGTAACAATTTCCAAGTTGAATGTACCACCAGGTGGTCTTGAAACAGTCAAATGGCGTGAATCAACCATATAATCTTCACTCTTAAGGTCCTTGCCATTGACTTTGATTGATAGCAGCTTCAGATCACGCCCATGAAGAGTAAGTGGAGAGGAGGTACCTTCAGTTCCTGGAGATACAGCTATTTTAGATGTAACTATTGTTTTGTCTTCGCCAAGTTGAAATTCCAAATTGACCGAGTCAAATAAGTAATCAGGCTTTTTGTATTCTTTCAGGAATATCTCCTTTGGAAGATCCATCTCTGGTTCTTCGGTTGTGGAAGGCGGCGGCTCGGTTGCAACGGAACAAGTTGTCCTCTTGCTGGCAAGCCTTGCACTATATAGCGACAAGGAAGGCGTGGCTGGTCTTGTCCAATGCGAGACCTCCTTCCTTAAATTAGGAAGGTAGCAATTCTTCAGTTGGGAACTCCTATGCGATGATGACAATGGCAGGCGATGATAATGGTGGGAGGAGAAGACGCCGAGAAATCCGGCGTTAAGCAAACCAGAGCCTTGGCAGGGGCTAATCAAACGGCGAGCCATTCCCAAATCCTAAGCGATTCACCCACCCTCGTCGCGTCCCCGCGAGCGAGCGATCGATCGATCGGAGCAGTTCGCCGGAGGCTGAAACTCCGACCAAGTAGAATCTGCAACTTGCGTTGTTGGATGGATGGATGGATAAAGTAGTTCAGTTGGAGAGGTTGGAGGAT

Explanation	CPC Score
noncoding	-1.30364

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0424500.2	8	28173386	T	A
Osa08LNT0424500.2	8	28173703	T	A
Osa08LNT0424500.2	8	28174065	A	T
Osa08LNT0424500.2	8	28174724	T	C
Osa08LNT0424500.2	8	28175628	G	A
Osa08LNT0424500.2	8	28176076	A	C
Osa08LNT0424500.2	8	28176547	A	C
Osa08LNT0424500.2	8	28176856	T	C
Osa08LNT0424500.2	8	28177044	A	G
Osa08LNT0424500.2	8	28178368	T	A
Osa08LNT0424500.2	8	28179825	A	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0424500.2	osa-miR5812	Cleavage	4.5	14.525	1	24
Osa08LNT0424500.2	osa-miR399e	Cleavage	4.5	19.113	1	21
Osa08LNT0424500.2	osa-miR399f	Cleavage	4.5	19.113	1	21
Osa08LNT0424500.2	osa-miR399g	Cleavage	4.5	19.113	1	21
Osa08LNT0424500.2	osa-miR159a.1	Translation	4.0	11.995	1	21
Osa08LNT0424500.2	osa-miR159b	Translation	4.0	11.995	1	21
Osa08LNT0424500.2	osa-miR159c	Translation	5.0	11.995	1	21
Osa08LNT0424500.2	osa-miR159d	Translation	5.0	11.995	1	21
Osa08LNT0424500.2	osa-miR159e	Translation	5.0	11.995	1	21
Osa08LNT0424500.2	osa-miR159f	Translation	4.0	11.995	1	21
Osa08LNT0424500.2	osa-miR167e-3p	Cleavage	3.5	12.077	1	21
Osa08LNT0424500.2	osa-miR167e-3p	Translation	4.5	15.683	1	21
Osa08LNT0424500.2	osa-miR167i-3p	Cleavage	3.5	12.077	1	21
Osa08LNT0424500.2	osa-miR167i-3p	Translation	4.5	15.683	1	21
Osa08LNT0424500.2	osa-miR171c-5p	Cleavage	4.5	15.683	1	21
Osa08LNT0424500.2	osa-miR5340	Cleavage	4.0	15.38	1	23
Osa08LNT0424500.2	osa-miR5498	Translation	5.0	13.166	1	21
Osa08LNT0424500.2	osa-miR5519	Translation	4.5	13.582	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus