© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0039200.1
GGGACAATAAGGAAATTTAGTTGCTTGCACAACTCAGATAACACGAGTTGGTGCTTGGTAGCAATACAGAAAATACGGCACGTACAATACAGAAAATACAACATGTGACCCACATTATGGATTACACTAGATAGATGTTGGAATAATAAATATGATTATTTAGATTTATAATTACTAATCATATAGTGGATTGTGAATATGACCACGCATTTTGCAGTAGTTAAGGTGCCTTTGTACCGCTTGGGTCCTGTGTAACAGGAAGGTGTCCATCGGACGAGCATCTCAAAACATCTGGAAGCCTTCTCAACTTTGGTCCTTGTTTCCCACTCAGGCGTTTTGGTTTTACATCCTGGTCAAATATTGCTGTAGGGATGGCAAGAGTTGCCACTGCATTAGGGGAGTCTACTATTCCAGATATCCTACCCTCACATGGGCAGCATGATAGCAAAAGGTATACCTGCTCCTTGGAGTACCCAAATCTGGAAAGGTACTCAATGGCATTGAGGACAGCACGCTTGTAGGCAACTGATGCATCAAGAAAATGCTGCTTCCCAGACTCGTCTACACTGATGCCCTCAAAGACTAACCAGTCTGAGAAACGTGGTTCCACTGGACCTATATCAAAGATAGGATTCACATGAAGTGGTGTTGGACCTATTGGAGTCAAGTATTCCTTCATCCCACCTCTTATGATCTCACACTTGAGCTCAAGAAATCCACTCATTTCTATTGCTCCACAGAATGAGACTTCGCCGTCACCCTGGGAAAAATGCATGTCACCAGTACTCAGATTTGCTCCATCAACAAATACCGGGAGATAAACCTTGGAACCTCTACTTAGATTCTTGATGTCACAATTCCCTCCATTCTCCCTTCCAGGAATAGTTCTTGCTGCTTCATTTGCGATTTTCTGCCAATCAGCAGTCCCTTCTTGAATCTTTCCAAGTAAACAGTTCTCAGGGGTTGGTAAGTTGGCAAGAGGCCTCTGATGTAGAACTTCACAGATTTTGATTGACTCATGATTTGTCTCAGCCAATATTTTTTCCCTCTCATTCCATATATTGAGAAGCTCAGCAGATGGTGCAGTCCCCACTATACCAGGATGAGTTAATCCTGGAAATCGGACACCTGGTATTTGAGGGGAGTATGCATAAATTCCTTCAAAATACCAAATCGCCTTTCTTGCACTAGGGAAGTGGTCGGTTAAGAATCCACCACCATTCTCCCTTTCAAATATGGCAGTATATCCCCATTCGTCACCGGGAAGTGGACCAAGGTTGCAGATCTCTACAGCAAGAAGATCACCAGGTGCAGCTGGAACCCCTTCAGCATCAACTATTCTTAAGGGCCCACTAAGATAATGAGTAATTGTGAGATCCAGGAATTTGATGTCATCTGCGGAGTTATCATCACTGACTCTTCCTCCAGTCCAATCGACCATCTCAACACGGAACAATTCCCCTTCAGTTACATCTGCAACAGGAGGGATATCTGGATGCCAGCGGTTATGGAGAGGGACTTTTTGCTCCCATGGCTTCTTGCTCACATCTATAGGAACTACCAATCTTGGTGTTGGAAGAGCCATGTTCTCCAACAAAAAATGGAAATAGATTGTATGAAATGGGAGTTGCGGAATTGTCTGATTTCCACCAAAATTAACCACTCTTTGTTAATGATGGCATTGAATTAATAGAGCATTATCAATTTTGCTTCCCAAGTATAGACCCCACATCTCATGAAGTGCATGTGCCAAAAGCACTCATCAATCTATCTGTGACCAATAAAACCGTTATCTTAGTAAAGAAGCACCTTTCTACAATTCCTGCTCCCGAATCAACTTACATGATCACATCCAAACTCAGAAGGAAAGCAAAGGCATGATTCTCTACATGGTATATATTGAATTACCTTCCAATGTTGTTCCTCACTCAACATACTCCAACAAACATCCATCAGTAGTATACTTCTTTGACTTGTCCTCTAACATTCGAAGGCTCCAGCCTGCATCTTTCCTCAGTCCCTTCTTCTTCATCCAATGCAAGATCCCCTGAGCTTCCTGCCACCTCCCTGTCTCAGCATACAAATTTGATAACAGAACATAATGCGATGCATTCTCAGGTTCCAACTCCACCAGCCTCATTGTCACATGCTCACTCAACCATGAGTCGCCACGGGCCCTGCAGCCTCTTAATAGCAAGCCCCATATCACTGCATTTGGCTGTGATGGCATTGTCTCAACAACCCTAAAGGCATCATCGAGGTGTCCAGAGCGACTAAGAAGGTCAACCATGCACCCAAAGTGCTTGATCCCAGGTTGAAACCCATACTCACCTTGTATGGCCAGGTTAAATATTTTCCTCCCAATGTCAACAAACCCGGCATGTGCACAGGCACAAAGAACACAAATAAGTGTGACTTCATCTGGCTGGACACCATCATTCTGCATCCGAGAGAACCACTGCAATGCCGTCTTGCCATCCTGTGCAAGAGCAAGTGCTCCAATGATAGAGTTCCAAGTATAGACATTCCTCTTGGCCATCTTTGAGAACACATGCATTCCATCTGAGACTTTTCCACACTTCCCATACATGTCTACCAGCGCTGTGCCCAGTACAACATCCATCTCCCATCCCTGCTTCTGCACGTACTCGTGAATCCAGATGCCAGTGTCGACCGCACAATGGGCCGCGCAAGCGCCAAGAGCAGCAACCATGGTAACGCGGTTGGGTGCAACATGAGCAGCAAGCATCCGCCGGAAGGTCGCCAGAGCGTGAAAGGTGCGGCCTCGGTTCCTGTATGAGGTGATCATAGTGGTCCACGCGACAACCTCCGGTCGGGGCATTTCGTCGAACATCTGCTCGGCGTGCGCCAGGTCAGGGTCGCAGTCCGCGTAGCGCGCGAGGAGGGCGTTGCGGACGTGGAGGTCGGGCCCGAACCCGGACTTGACCACCTGGCAATGCACGGCCCTCAGGTCGGCGAGGGAGGACAGGGAGGTGAGCAGGAGAGGGAAGGTGAAGCGGTTGGGGCGGACGCCGCGGCATCGGAGGAAGTGGCGGAAGAGCGGGAGCGGGGAGCGGGCGGGGGCGCGGCCGAGGGAGCGGAGGAGCGAGTTGAAGACGAACACGTGGGGGCGCGGGTGGCAGGCGAAGAGGGAGAGCGCCGGGTCGAGGTGGCGGAGACGGCCGCAGGCGAGGAAGAAGGCGGAGACGACGGCGGTGGAGCGGAGGAGCGCGCGGTCCCCGAGGATGGCGCCGCGGATGGGCGCGAGCGCGGCGGCGGTGGTGCAGGTGTTGATCGCGTGCAGCGCGCGCGTGACGGAGGGCGGCGGCGGCGCGGTGGACGGGCGGAGAGGCGGCGGGAGGCCGCCGGTCATCACGGCTGGCGGTGCGTGGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0039200.1 | 1 | 32226386 | G | C |
| Osa01LNT0039200.1 | 1 | 32226395 | A | G |
| Osa01LNT0039200.1 | 1 | 32226916 | C | G |
| Osa01LNT0039200.1 | 1 | 32227173 | A | T |
| Osa01LNT0039200.1 | 1 | 32228560 | A | G |
| Osa01LNT0039200.1 | 1 | 32229625 | G | A |
| Osa01LNT0039200.1 | 1 | 32230429 | G | T |
| Osa01LNT0039200.1 | 1 | 32230468 | G | A |
| Osa01LNT0039200.1 | 1 | 32230596 | A | G |
| Osa01LNT0039200.1 | 1 | 32230945 | G | A |
| Osa01LNT0039200.1 | 1 | 32227147 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0039200.1 | osa-miR1862d | Translation | 4.5 | 15.561 | 1 | 21 |
| Osa01LNT0039200.1 | osa-miR5522 | Cleavage | 4.5 | 15.298 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0039200.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0039200.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0039200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0039200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0039200.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0039200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0039200.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)