© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0039300.1
GGGTTTCTCATTACTATCTTTCATCAAAAGGTGTACTATTGAGTACCACAGTATGCATCCATAGTGATCGGCCAAAGTACATTTAAAATAACAGTATCTCCATTTGAAGGTAAACTGTCAAGTAAGTAGAAACAACCCATTCTAACCACTGAGAATTCTTACAAAAGAATTGAGACATCAAAGACCATCATTGCAGGCCGACTCCAAAAGCCATATATCTACACCCCCAACAATTCAGAGTCTCCGATGAATTGTAACCCCCCATCAATGGGACCAGAGCTTCTTGTCTTTGCATCAATATTGTATCGTTTTCCCTTTACCAGAACTTCTCTTTGATTGCATATCCCCCTCCAAAGAAAAAAAGAAACCGATTATACCACATGTATTCTATCACTCGACTTGCTCGCCGATCAAGTCGAGGCCGACAACCAAGAATGAGACCCCTTGGAACAGAAGGAAGTAGAAATGTATGCCTTGCACCGAGAGCAGGCTTCGAGCTGCTGCTGTTAATAGAAGGAAGGAGAGTGCCAGCTCCTTCTGGTATATCCTATTGTGTTTTTTCTTTTTCGAATCCTTTTTCGGATGGGACTCCTTCGCTAGGGAATCAAGGTTGGGTGCAGACCCAACTCTCTGTTGCTTAGGCTGCTTCTCAACAAGAGAAACGAGATCGCCCTCAGAAGAACGGCCCGATTTCTTGGTCACAACCCACTCGTAGGCGCTCCCGAGCTGGAACAAGCCAGAAATCATGGCATTGAATTTTGTCACTGACATGGTATTCTCAAACAGAAGGTAGGGAACAATAAATGGGAAGGATTTGGGTGCTGGGAGAATATTCAGCAAGGACATGGTTGCTGGAATGTAGCACACCACCCATGCAGGGAGCTCAGCTTCAGGGACAAACATTGTCATGGGAAGGATGATGCAGAAAAGTGTGAAGGAATAGAAGGGCAATATGAGTTTGCGAAGGAGAAAGAAAAGGAAGATGAGGTTGAACTTCTTCCATACTCCAATCTTTGATTTGATGATGTCGACAAAACAGAGTCGAAACAACTGCATGGGACCAGAATGCCATCGATGTTGCTGCTTTCTGTATGCTTCATATGACTCTGGCAGCTCACACTGGCACTCGACATCATTAATGTACAGAAACTTCCACCCCTTGAGATGTGCTCGGACAGCAATATCCATATCCTCCACTGTTGTCCTCTCCATCCATCCTCCAGAGTCCTCAAGTGCCTTAATTCTCCATACTCCTGCGGTTCCATTGAACCCAAAGAAATTGAGGAATACTCCATTAACCTGCTGTTCCACCTCAAAGTGGAAGCACAGATTAATGTTTTGCAGTCTAGTCAGCAAGTTCTCGTCTTTGTTTACAAAAGACCATCTTGCTTGAACCAATCCAACATCTTCATTGCCCTTGAAATGGGGCACAGTTCGCTTCAGGAAGTCTGCTTGTGGTTGGAAATCAGCATCAAAGATAACAACAAACTCATAATCTTTAACATAACTGCAGTTCATGGCTGACTTGAGATTTCCAGCCTTGTAGCCATCACGGATCACCCGGTGTCGGTACAATATGCGGACACCCTCTCGCTGCCATTTCTCCACTTCCTCCTTAATAAGTGCAGAGGTGGCAGCATCATCAGAGTCATCTAGTACTTGTACTAAGAAGTTTGACCTTGGCCAATCCAGGTTGCAGACAGCACCAATGGATTGCTGGTACACCTCCTTCTCGTTGCACATTGGAATCTGCACGAGGACCATGGGGAACTCGTCGGCGCCGGCCTCGACGTCGTCCGACCCTTTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0039300.1 | 1 | 32320004 | G | A |
| Osa01LNT0039300.1 | 1 | 32319033 | A | G |
| Osa01LNT0039300.1 | 1 | 32319279 | A | G |
| Osa01LNT0039300.1 | 1 | 32320036 | C | T |
| Osa01LNT0039300.1 | 1 | 32320711 | G | A |
| Osa01LNT0039300.1 | 1 | 32321114 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0039300.1 | osa-miR164a | Translation | 3.5 | 14.63 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR164b | Translation | 3.5 | 14.63 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR396a-3p | Translation | 4.0 | 15.134 | 1 | 20 |
| Osa01LNT0039300.1 | osa-miR396b-3p | Translation | 4.0 | 15.134 | 1 | 20 |
| Osa01LNT0039300.1 | osa-miR164d | Translation | 3.5 | 14.63 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR164e | Translation | 3.5 | 14.63 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR168a-5p | Translation | 4.5 | 19.576 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR168b | Translation | 3.0 | 19.576 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR169p | Translation | 4.5 | 18.993 | 1 | 22 |
| Osa01LNT0039300.1 | osa-miR171f-5p | Translation | 4.0 | 19.204 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR171f-5p | Cleavage | 3.5 | 19.742 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR164f | Translation | 3.5 | 14.63 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR1429-5p | Translation | 4.5 | 24.954 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR1853-5p | Translation | 5.0 | 14.812 | 1 | 24 |
| Osa01LNT0039300.1 | osa-miR2092-3p | Cleavage | 4.0 | 19.924 | 1 | 22 |
| Osa01LNT0039300.1 | osa-miR2118l | Translation | 5.0 | 14.375 | 1 | 22 |
| Osa01LNT0039300.1 | osa-miR2905 | Cleavage | 4.0 | 15.542 | 1 | 21 |
| Osa01LNT0039300.1 | osa-miR2928 | Translation | 5.0 | 19.786 | 1 | 20 |
| Osa01LNT0039300.1 | osa-miR812n-5p | Cleavage | 5.0 | 19.489 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0039300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0039300.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0039300.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0039300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0039300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0039300.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0039300.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)