© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0427500.1
AGCCGCCACCACACCTTCCGTCCTGCGCCCTTGCCGCTGCCGCTGTCGACCCGGTTGCTGTCGCCGTCTTTGCGCCGCCGCCACGGCCATAGCTGGAGGCCGCAGCCGTCGTCATCCATCACAACCGGCGTTTCCTTTCCGTTTTCCTTCTTCCCGAGAGAAGGGTACCGAGAGGGTGTACAGGAGGAAGAAGGAAAGGAAAAGCAGAGCAACGTTGAGGAATTTCAGCGATTTCGCAAATTAGGGAAATTTGTCGCAAGACAGAGGATAGAGGGGAGGGGCAAAAGAGAAAAGTCCGTGGAAAATGGGCTGGTGCCTCATTGAGCAAGGTTTGACGCTGTGCCATGCCATATAATTGATAATGTACGCACTTTTGTGTTTTTTTAATCGTTGTCTCAAATGAACTAACAACTTCGATACGCATTACAAATGTACAATAGAGCTTTTCGTATTTTCAACAAAAATATTTTCTATGATATATATATTGCATAACGTACAAATGGAAATATTTTGATTTAGTTCCAAGGTGATATGACTGGTTTATTTTTCTTTGCTTATTATTAGGAACCAACACACACATATATGTAATATAAATATAAATTTGTAAGAATATTTAGTAGAGCAGTGAATTTACTCTTGTGCAGCCTAAAGTAGCCAAAGGTCACCAGCATCTTTCTCTTAACATTATTTTTCCCCATCTTTTTTTTTTTTGCGATTGCTCTTACGGTTCTTTTAAATCTTGTATGTGCCATCATTGTGTACTATGCAGCGCTTGTTCTAGAAATATTTATCCAGTTCCATAATTTTTTATTTCTACTTCGATGAGGAGGGCAGGTGTGCTTAGTAGCTTACAGTACCAAATATGAAGTTAAAAGAAATTTAGACTCTATATTACCCCTTTTTATCAAATATTAAAAAGTGCTCTAAGTGCAGACTCCTATTGGAGTTGTGAGTATTTGTATACATGACCCTGTCAAATTGCTACTAATTGTCCAGGAAACTTATATCAATATGTTACCCCAGCTACACTCATCTGCTATCAGAATAGGGCTAACTGAAATTGGTACATTAATTGAGCCCCATTTTTCAAAAAGGTTTTAACATATATTGTAGTACATGAAATTTCAATTCCTTTTACTTGCTAGAAAGTAAATACCGTGCAATTGCAACTTTGTTAAACAACAAATATATCCACTGGTTTGTGAGTAATGTTTTGAAAATTATATTATATCATGTAACAATTTCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0427500.1 | 9 | 2341133 | T | C |
| Osa09LNT0427500.1 | 9 | 2336511 | G | A |
| Osa09LNT0427500.1 | 9 | 2336785 | G | C |
| Osa09LNT0427500.1 | 9 | 2341023 | C | T |
| Osa09LNT0427500.1 | 9 | 2341381 | G | A |
| Osa09LNT0427500.1 | 9 | 2348614 | C | T |
| Osa09LNT0427500.1 | 9 | 2336675 | G | T |
| Osa09LNT0427500.1 | 9 | 2337020 | G | A |
| Osa09LNT0427500.1 | 9 | 2337082 | A | G |
| Osa09LNT0427500.1 | 9 | 2337524 | T | C |
| Osa09LNT0427500.1 | 9 | 2337806 | C | T |
| Osa09LNT0427500.1 | 9 | 2338323 | T | C |
| Osa09LNT0427500.1 | 9 | 2338720 | T | G |
| Osa09LNT0427500.1 | 9 | 2338778 | A | G |
| Osa09LNT0427500.1 | 9 | 2338965 | C | G |
| Osa09LNT0427500.1 | 9 | 2339594 | A | G |
| Osa09LNT0427500.1 | 9 | 2339678 | T | A |
| Osa09LNT0427500.1 | 9 | 2340684 | A | G |
| Osa09LNT0427500.1 | 9 | 2340710 | A | C |
| Osa09LNT0427500.1 | 9 | 2341247 | A | G |
| Osa09LNT0427500.1 | 9 | 2341347 | T | C |
| Osa09LNT0427500.1 | 9 | 2342050 | A | G |
| Osa09LNT0427500.1 | 9 | 2342159 | A | G |
| Osa09LNT0427500.1 | 9 | 2342251 | A | G |
| Osa09LNT0427500.1 | 9 | 2342664 | T | C |
| Osa09LNT0427500.1 | 9 | 2342812 | T | C |
| Osa09LNT0427500.1 | 9 | 2343954 | C | T |
| Osa09LNT0427500.1 | 9 | 2344272 | T | G |
| Osa09LNT0427500.1 | 9 | 2345520 | A | G |
| Osa09LNT0427500.1 | 9 | 2345561 | A | G |
| Osa09LNT0427500.1 | 9 | 2345778 | T | C |
| Osa09LNT0427500.1 | 9 | 2345782 | T | C |
| Osa09LNT0427500.1 | 9 | 2345868 | C | T |
| Osa09LNT0427500.1 | 9 | 2345902 | A | G |
| Osa09LNT0427500.1 | 9 | 2346042 | C | T |
| Osa09LNT0427500.1 | 9 | 2346877 | T | C |
| Osa09LNT0427500.1 | 9 | 2347551 | A | G |
| Osa09LNT0427500.1 | 9 | 2348901 | G | A |
| Osa09LNT0427500.1 | 9 | 2341752 | T | C |
| Osa09LNT0427500.1 | 9 | 2340725 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0427500.1 | osa-miR5525 | Cleavage | 5.0 | 9.673 | 1 | 22 |
| Osa09LNT0427500.1 | osa-miR5810 | Translation | 5.0 | 12.209 | 1 | 24 |
| Osa09LNT0427500.1 | osa-miR5817 | Translation | 3.5 | 18.538 | 1 | 24 |
| Osa09LNT0427500.1 | osa-miR1439 | Translation | 5.0 | 15.484 | 1 | 21 |
| Osa09LNT0427500.1 | osa-miR1854-3p | Translation | 5.0 | 20.771 | 1 | 22 |
| Osa09LNT0427500.1 | osa-miR5081 | Cleavage | 3.5 | 10.141 | 1 | 22 |
| Osa09LNT0427500.1 | osa-miR5148c | Translation | 4.5 | 11.696 | 1 | 24 |
| Osa09LNT0427500.1 | osa-miR2873b | Translation | 4.0 | 17.76 | 1 | 21 |
| Osa09LNT0427500.1 | osa-miR5148a | Translation | 4.5 | 11.696 | 1 | 24 |
| Osa09LNT0427500.1 | osa-miR5148b | Translation | 4.5 | 11.696 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0427500.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0427500.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0427500.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)