© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0427800.1
GCAAACTTGGGCTGGTGCTATATTCATATAGAACTCGACATTACTGATCTGAGAACTCATATCCGGTACAGAATCAAAGCAGATGAAGCACCTATGCAATACAATCAATAGAATCAATGGAAGAGAAAGCCAACTTGCACAGATAATCTAAAGCTAGCGGCTAACATTTCTGGTAATATAGAGCAGCTGCGATAATATAAGTATGCCTCTTAGAATTTATATTTTCTTCTTGATAATCCTTCAGATTTAATTTAGGCACAATTGATCGGTGGCTGCAAGCAACATGGTCCCATACTCTGATATTGATTTGTCTTCCAACTCTTAAACTTAAGACGCACTGGAAGGAATGGCAGGTTATCCTCAAGATTTGTCTTTCCTTGAAAGATTTGAGAAACTTCAGTAAAAAAAAAAATCCCTTTTTTAGCTTGACCAACTTATACTTTTATTATTCTCATCAACGTGCTTCACAAGGAATAGATAACCAAAATTGCATATAACAGCCAATGAAAATTTCATTACCATATTTTCCAGACCTAAGAAAAACCATTATATTGTTTGAGATCACATAAAGTTTAACTCATGAGCTTCCAAACCTAGGAAATTAACTATTTCATTTTCATATATCATACCTTCTATTGCCACGGAAAGCCAGTGCTGGAAACAATGGGTAGCATACTGAGACACATCATGCTGATTTTGTTTGGGATCACAGAATGACTGAGACGAAAAACTTCAGTATGTCAGTTCAAAACTACAATAGAGTCATCTAGCCTAGTTAGAACTGCAAAATAGCTAGCAATTCTGTGACATTTTTTTGACACAATTTTTTACAAACAAATAAAATTATAGCAAGCAAAAATTATTCTAAATTGTTTTGCGCAAAAGCTGGCTGAAGACTTAATTTCCAAGCCAATGCGTCACCAGTAAACAGAGCAGAATGACAGCAACCCTTTCAATTGGACCAACCCAACCAAACCACATTAATTCTGTCAAGCAATAGAACTAAGTGAAAATTTGAAGTGGCCATATTATTCTGCCAATATTCTAATTGCAAATAGAAAACAATGATACTGGCAGCTGTTTCAAAGCTAAAATACATTGTAGATCATGCAAAGCAAATATCTTGATAATTCAAATATGGTTGTAATCTAATTGAAACCATGTGATGTCTACATAACAAAAACTATATAATATATCATATATCAACAGGCGTGTGAGGGCACTGATAAGCAAAACATGACAAATATAGATGAAAATATTAATTTAAACCAAATTGTATATAAAGAAATATTGCAATGGAAGGAAATGTTGTGAATATAAGCAACTAATAGAGTTGGGATCAACCTATCATTTGGGGTAAAAAGATTGTTTTACTTAAATGGTTACGCTGATACTTCCTCTATTAGATCAAAGCGGTAAGAAATAATTCCAATTATCTTACATTTAGCTAGTGTATGAATTAAGTTAGCGGTAAGAAATAATTCCAATATTCCAATGCAATACAGATTACATATTGTCCCATGAGTTTTTAGGTCTAGCAGAAGTGTATGACTATAACCAAGATCTGTATGGTAGATATTGTAGGAGTTGCAGGCTAGATGAATTTTCCATTCAAGCATAATGTAGACAAGTCTGTAGAATAAGCTTTATAGGGATAGACCCTTGTATAATGTAAAAAATAATAGAATGAGAGGATCAGTTGCATACCTCCAAAGTGAAAATTGCCACTCGGATCTACATAGTTTTAAGAATCTTAAACATCAAGGAAATATTCATTCAACAGCTCCATGCAAAATATTAACTTTTTTATATATGTAATTACAAACGGTGAAGAAATACCATGGTTTTGTTAATGGATTCTTTTTGAAAAAAAATGTTAATAAGTGGCAACAGAACATGGTTTTACTTAAGATAAGTGATATGGTACTACAATTTAAGAAACAAGAAAAGAATGTAACTTGTATGTAATTTCTTTTGTCCTTAGCAATTTTAATATTTTTTCTTTCCAGTATTAGATATTGTAAGCATGCAACAAATAACAACTAAAAAGTTGTATAGAACAATCATGTGGTCCAAATTATAAACGATTCAAAGTGGAAATATCACTGGGATACATTTTATATTTGTATTTCTACAAACTGGGGTTGGCACTCAACATTACTTATATGAGAACAAAATGCATAACCAGTACATATACAAAGCAAATCAAGCAACTGTGCAATTCAATCAATAGGATTTCATGGTTCATCTGTATCGGACAACCTGCATTTCTGCTCACATAGAGTAGCTGAACAATTTGAAATGACATATTGGGGACTCCCAGATTGACCTAATGTTGGATGGTGCTGTGTGATTCCCCGTTTAGTCGGTAGTTTCCTTAAGACGAACAATACTGAAGCTGAAGGTACAATCTCAACCAACCATCTAAGGAAAGTGAATGTTATCAACAAAGGATATCGGTGAGTACAATTGTTGGTTTGCACATGCTCAAAATGACACAACATAGGATTGTGTTTTGCAGTTTATTCTTGGCACATTTTTTAATGGCTAGTTGCAAAAGCTAAATAAATTTGGTAGGAATTATCTTTTATGTCGATTACTTCACAAAAATCCAAGGATACTCCAGTAACAAAAGTTCATTTTTAACTCGTTCAGCAAAATTGATATGTTATACTTTCAAATGGCTAGTTACATGTAGATCTGTTTTCATCGCTTCAACTATGAATTTGCCATGATTATCCATAGGGAAAAAGATAGTCCCATTACACAGATGGAACAATGGATTGACAATTTGTAAAAGAATCACCATATAGTATTTTTGCTAAAAAAAATGCCTATGCGCAGATACATGCACACACACGACTTTTGTGAAATGAATATTTTTTTGTTCCCTCTTATATATTCTACCAAAATCAAATTCTTTTAGCCATAATCTCGATAGCATTTTCAGCTCAGGTATTTCTCTAAACACAATTAATCTATTAGGATATAAACAAGGCAAAGGAAATATATCTTTCACAAGTTTATACTATAATCTAGCAGTATGCTTTGTTTGCTTCCACACCAATTAAAATCATGTTATAAATGATTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0427800.1 | 9 | 2399166 | C | T |
| Osa09LNT0427800.1 | 9 | 2397182 | T | C |
| Osa09LNT0427800.1 | 9 | 2398294 | A | T |
| Osa09LNT0427800.1 | 9 | 2399970 | C | T |
| Osa09LNT0427800.1 | 9 | 2397482 | A | T |
| Osa09LNT0427800.1 | 9 | 2397950 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0427800.1 | osa-miR5530 | Cleavage | 5.0 | 9.416 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR5543 | Cleavage | 4.0 | 17.116 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR169d | Cleavage | 5.0 | 15.18 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR171h | Translation | 5.0 | 13.088 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR1862d | Cleavage | 5.0 | 13.451 | 1 | 24 |
| Osa09LNT0427800.1 | osa-miR1320-5p | Cleavage | 5.0 | 9.297 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR2122 | Translation | 4.0 | 14.588 | 1 | 22 |
| Osa09LNT0427800.1 | osa-miR2864.2 | Translation | 3.5 | 14.273 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR2864.2 | Cleavage | 4.5 | 14.7 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR2864.2 | Cleavage | 5.0 | 11.829 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR5081 | Translation | 4.0 | 13.097 | 1 | 22 |
| Osa09LNT0427800.1 | osa-miR5081 | Translation | 5.0 | 10.266 | 1 | 22 |
| Osa09LNT0427800.1 | osa-miR5524 | Cleavage | 3.5 | 7.641 | 1 | 21 |
| Osa09LNT0427800.1 | osa-miR171h | Translation | 4.5 | 18.081 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0427800.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0427800.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0427800.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)