© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0428100.1
CGACTCATTTGGTTGATAGGGCCAACATATAACTGATGACAAATGGACAAATTACATGAGAAGATCTGAATATTTTGATTATGCCACCACAAAGTAAGTTCCAATTATGGTACCAATAACAAATGGAATGCCAGACCTATGTCAGAATAGATGTACAATTACGATGGCATTCTTGTGTAAATGTGAGCAAAGAATAATTAGCATTTCTCACATGAAAAACTGAGGCAAATTTTTGCAATTTTGCCACTAGCCCCGAAGGAGCACAGTTCGCAATCCAGTACCCTGGGGCAATTCTAAATACGATCCCTCAGTCTGATCATTGTTGAAATAATTCACTTCTATTGACCCTTATTTTGGCTGATTGCCCCTCTGCTTCAACATCGTTAACAACTCCACGGCATTTTGGGAATCCACAATAACAAGGAAGTCGCTGATCACTCGAAACAAACCTATAATCATAAGTCAACTCTTCCCATGGATTTATATCCCGCTTTGCAAAAATGATGATATGCTCATCCCCGAGAACACTTATGACGCGTGAATAACAATTCGGCTCACAAGAATGATTAATTAAATGGGCAATGCTTCCTGCCCGCGTAGCATCTATAACACGCTCATCATCTATCCTGAACATGTACGTCCCAGCACCCACTAAAGAGTTGTATATGCGCCGCTCTCTAATGTCTGATATTGGTGGCCTGACGAGCTCTCCGATGTACTCAATCATCATGTCGCCTGCCTTGTGCGAAACCTTTGCAAAGACACCAAATCCATGAATTCTTGACTTTCCAAAAGCTAGTCTCCTCCTGAATGTAGCCTTCATGCTTTTATACTTTTCAATCATAGAAGACACGTTGCCAACAGCTTCTTGATGTGCAACATCCAAAAAGCCAACTGATTGAATTGGTTCACTGATAGCATCATGGCCTACTCTATTTTGGCAGAAACCACTAACAATATAAGGCATATTCTCTACATATAAACGTTTTACAGAAGCGGTAGCCATAACTTGAGGTTGCTTTTGGCCCCTTCTCCCATGGATATTATAAGGTTCAGTCCTTGCACAACCGGATGGTGGAACTGCATCTGTCTGAACTACCACAGCAGGCTTAGCAAGGTTACTTTCAAGAGATGGACGTTCAGTCGATGGTTGTCTGTGCTTCTTGCAGTATGAAAGTAGACGAATACATGGGTCCTCATCCTCATCAAGTAACATGAGGTGGATTTTGTCATCATCTTCAAGCTCAACACAAAGATCAGCAGCACGTGCACAAAGAGGGTGATATGCAACACGACAGGTAGGATGAGAACACTGTATGCAAGCTCCATAAGCAACTCCGCAAATGCTGCATAGAAGTTTCCAGCGGTCCTTGTTGATTCTGCTCAATCCATCAATCGGTTCCATTCTCTTCACATCTTTTAAGCAAGTTTCAGGAATCCATATAGCACATGCAAGATGAGCCCAACGACCATCTGTTGTTGGTTTCATTGCGCCCCCTGTTACTGGACAAAGACAGCATCGTGGAGAAACACGAGGCGCCTCAGGTCGACACAGGTTGCAAAGCCAAAGGACTCCATTCAATGGTTCGAGTTCACCATAGCATCTAGCATGTACCATCATACGGCACTTATCACATTGCAAGAACAAATTGTCTTCGTATTCCTCATCCATATCACAAACACTACAATAGTCTAGATCTTTCCAATTTACATGAACAGCTCTATACCCACGAAAGGTGTCTCCAGCATTTTCAAAATACTTTAAGCATGACCTTGCATTGGGTAACTCCTGAATAAGTTGCCGTATTTGTGGATTTGAAAAGCCAAACATATAGGAACCAGATCCCTGACAAACATCTCTGTCCAATCCAGAGGCCACATTGCGCTGTTTTTCCTTTAATCTACAATATATCTCCTTCCAACATGTATTTGGGGTAGAGCCATCAATCTGTGTTCCATCTTCTGATGTGACCCTAAACAATGGCCGAGCTTTTATATCTGAATTCCTCAGTACCTCCATTTTGTAAAGTATTACTACATGTGGATCTTTCACTGATCTGAACTTCCTGAAAGCAGTATACCCTTCAGGCCATATATGCTTTTTGTTATGGAAATAGTCTGAGTCAGTTACTATCCTACCTAATTTGCTCACACGAAGATTTCCTAGTTCTATTGGAGTCATCTCATCATAATCCCCTCCGCTTTCAGCTGTTTTATCTTCAGATAAATTGTCACAAGAATGTACATCTTTATTGGAATTAGCATCAGAACTGCCCTTTTCCATGGATTTCTGTAGTTGCAACATATTTTCTGGGAGAAGCTGTGTGCAGAGAAACTCCTTGGCTTCTTCTAAACTCCGATAGAAGCGTGCTTGCTTGCATTTAAGATGCAAAGAAGAAAGAAGGCCATTCAGAAAGGGCACCGCTTGCTTCAACTTAATCCTGGCAAAATCATGAGTACCAAAGAATTGAACAAGTATCGACTGATCTAGTCGGCCTGGCTTCAAAGCCCTGTTAGCAGGAACATTTGATTCATCCACCACAACAGCTGGCCACATGGCATGACCTGTAAGTTTAGCCCACACAAGATCACCTGGATCAAGACCTTGGTAATCATGAAGGCTAACAGCAAGGGCAAGCAACTCATCATAGCCCCTCTTGTTCAGATTGGAAATTCCAAATTTCAAGTTCCTGCACTTCATTTCTTCAGATGAAATAGAAAATTTTATCCTTTCATCAGCTAGGTTAAGGTCCTCTGATTCGCCATCATCATACTTTACGGAATGTTTCTTAGTCGCTTCATTGTACCCTGTGATAGAACCCTTGTACCAATCCTCATCGAGGGGCCAGAAAACCTACATACACTGCAAGGTTCAGGTCCCAGCCTCTTACATTCCCCTAAAAAGAAGCTAATAAAAATCTTTGTCAAGAACTTTTGCCTTGCATCCTAATCCCACAAAGGCCAGTGGATCCGCAGCCTCAATTTCCAACTCCAACCATCTCCTCCCAGCCGAGGAGGCAGCTTCCTTGTGCACGCCCTGCCGCTGCCGCCTCTTGGGTTCAGAGAAGTAACCCCTCCTCTCAGCCCCTCCGCTACGCCTCAGGCAGCGCCGCCGCGCGGGCTCCTCCCCATCCCCGCCTAATGCGGGCGGGGCTTGCCCCAGGCTCAGCAGCTCGTACTTGAGAGAACCCTTCCGCCGTGTAACCTCCTCATCCTCGTCGTCCTCCCGGGGGTGCAGCATCGGTGGTGCTGTGGCAGGCGAGGGAGGTGGCCCCTCGACCCGCGGCTTCTTACGGCGGCGGCGGTAGTAGACGATCACGGGGGGCTTGCCGTCCTCGGCGGAGCGGGGCTTCTTGGGGAGAGGGCACGGAGCAGAGGAGGAGTAGACGCGGCCAAGTGGGAGGTAGCGAATTGGGTGGTCCACCTCCTCCTCCTCGTGCACGAAGCCCCCCTCCACCGCGATCACCATGGCTGGGCTGGCTAGGGTTTCGGCTCTAGGGCTTCGCCACTGGAGGGGTTTAGGGATTTGGGGTTCCGGGGGAGGGAAGTTTTGGGGGCCCTGAGGCCCTCGCGAAAATTTTTTGCCGTTTCCCGCCGGAGGACGCCCCTCGCCCCCCTCCTCACTCCGGTCGGCCCCCGGAGGCTTGGGGGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0428100.1 | 9 | 2601751 | C | T |
| Osa09LNT0428100.1 | 9 | 2603114 | T | G |
| Osa09LNT0428100.1 | 9 | 2603858 | A | G |
| Osa09LNT0428100.1 | 9 | 2603896 | A | C |
| Osa09LNT0428100.1 | 9 | 2603909 | A | G |
| Osa09LNT0428100.1 | 9 | 2606124 | G | C |
| Osa09LNT0428100.1 | 9 | 2606355 | A | G |
| Osa09LNT0428100.1 | 9 | 2607261 | A | C |
| Osa09LNT0428100.1 | 9 | 2607464 | T | C |
| Osa09LNT0428100.1 | 9 | 2607941 | A | T |
| Osa09LNT0428100.1 | 9 | 2608700 | T | C |
| Osa09LNT0428100.1 | 9 | 2602692 | A | G |
| Osa09LNT0428100.1 | 9 | 2609564 | T | C |
| Osa09LNT0428100.1 | 9 | 2610555 | T | C |
| Osa09LNT0428100.1 | 9 | 2610858 | A | G |
| Osa09LNT0428100.1 | 9 | 2611377 | C | A |
| Osa09LNT0428100.1 | 9 | 2611894 | C | T |
| Osa09LNT0428100.1 | 9 | 2612260 | C | T |
| Osa09LNT0428100.1 | 9 | 2613467 | G | C |
| Osa09LNT0428100.1 | 9 | 2613507 | C | A |
| Osa09LNT0428100.1 | 9 | 2615186 | T | C |
| Osa09LNT0428100.1 | 9 | 2604498 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0428100.1 | osa-miR399d | Translation | 3.5 | 12.98 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR399h | Translation | 4.5 | 12.98 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR399j | Translation | 3.5 | 12.98 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR171i-3p | Translation | 3.0 | 15.704 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR1425-3p | Cleavage | 4.5 | 17.657 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR1428a-5p | Cleavage | 5.0 | 16.491 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR1857-3p | Cleavage | 4.5 | 17.181 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR2873b | Cleavage | 4.5 | 12.63 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR5487 | Cleavage | 4.5 | 12.09 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR5507 | Cleavage | 5.0 | 17.644 | 1 | 21 |
| Osa09LNT0428100.1 | osa-miR5802 | Translation | 4.5 | 17.147 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0428100.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0428100.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0428100.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)