>Osa09LNT0428300.4

ATAAAATTTCTCGTAGTAACCAACTTACTATTACACTGATGGTTCTCAACATTGTCTCTTAGTAACTAAATTACACTGATGGTTCTCAACATAACATATTAATCTTGTCACAAAATTTCTCTTAGTAACCAAGTCACTATTACATATTAGAGCAAAATCTTACTAAACTACAGTACCTCTGTTTCAGTGTTCATGCTTCTTACAATCCATTTGAAGAAAAGCCAATTGAAAGAAATATATATATACAGGAGTTAACATCAAGTCTATTTTTCACAAACAATGTCGTCGCACTTTCTCTCTCTTGCTTCATGCTATAGAAATTCCTCGTGCTGAAGATTGCAGCATCTTCTCAAATCCTCCAACCAGTACAATTTTCATATTTAGTTGGAGAATCACGAAAGGGTTAAGTATAATCAACCATAAACCTCAGCTCGGGTGCTCCTCAATCCATCCGGTGACAGAGTAGCAGCTGCCATTACCATAGCAATCAAATTCAGAGGACCAAATCAAAATTAGGAGAGCCTACAACTGCAGCCAAGTATTTGTATTTAAGCTGAATAACAGATCAAAAACATCACGAGAATGCAAATGAAAAATGGCAGAACTGCAGGGATTCTAAACAGCTGCTTTCTTCTCATCACCATCGCGCATCAAAGAACAAAACGTGCCACACTTTTAGAAAAGAACATGGATTCCAATACCAAAAAAAGGGCACCCGAAAAAAATTAGAGTGTTGTTAACTGAAAGATGTAGAAAAGGTAATTGGGATGCTTCAGGCTAAAAAGATGCAAATATCGCTGATTAATAACACACAATTTATGAACTGAACCTAGCTGCAGCCGATGTCGTCGGATTGGTGTGGATGGAAGGTGCTCGATCTGTGTCGTCGACCCCGCCGCTGCCAGCTGTGTTGAGCCACCTGTGAGGATCTGTTGGAAAAGGATCAAATCCGTATCTAATTTGGAAAACGGCCACTACAGCCGTACATGCATGGGACACAAACCGATGACATCTAAGAGCATCAAAGAAATTAGTCTCTCTTGGGGTCTAATCATTCAACTTGTGTCTGCATCCTGTTCTCGGTGGGGAACTGTGGAAGGTAGATGCCGGATCTGGCTCATCTCGATAGCGGCACCGATTCTACCATGGCTAGCAGAAGCCGACATGGGAGGAAACTCGCGGGAGAGGGGAAGTTGAAGATCGGCGACGGCACTCCACCTGACTCCATCGACAAATCCACCAGATCCACTGACTCCTCACCGCTGCCGCTAGCGAGAACAGATCCAGGACGCCGCTGCCTCCTTCCTGTAGCCCGCCATCACCACCGCACACTGGCCAGCCGTTCCCAGATCCACAAAAATCGGATACAAGGCTGGTGCAAAAAAAATAGAAATAACCGTAAGAGATGGTAAAACCAGTATATATACATGCCAGGTGTTTTCTAGCAGTAAACAAATTACTCCAGAGATAAAAATGGTGGGGTGGGGGGTAGCGACCCGGGATGGGGGTGGGGGGTGGGCC

Explanation	CPC Score
noncoding	-1.22423

Transcript ID	Chromosome	Locus	Ref	Alt
Osa09LNT0428300.4	9	2923251	G	C
Osa09LNT0428300.4	9	2923288	T	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa09LNT0428300.4	osa-miR1846d-5p	Translation	4.0	23.585	1	22
Osa09LNT0428300.4	osa-miR2093-3p	Translation	5.0	12.663	1	20

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa09LNT0428300.4	9	clr9	Resistance or Tolerance	Cold tolerance	RM285	RM434
Osa09LNT0428300.4	9	qPC9	Physiological trait	Eating quality	RM4413	RM1896
Osa09LNT0428300.4	9	qAC9	Physiological trait	Eating quality	RM4413	RM5122
Osa09LNT0428300.4	9	nan	Morphological trait	Root	C711	G103

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus