© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0429400.1
GTCGCAGATGATACAGTCGCTAGGTTAATTAGAAAAAGAACTGGCTACACTTTCAGATAATACGGATTCGGTTATTAGAATCGCATCACAATTACTAACCTCTTTCTACTCGTGGATCCTAGTCAAGCCTGCAGCTAGAGATTGCAAGCAAGGAGTGCTATAACCCCACCGTAGGTTCCCTGGGGCTGGAGATGGATAAGCATAATATCTCCGCAGATCGTCGTCTCCGTCACGAGATATGATCACGGGCAACATCACGGACCTTCAATCTTGATCTTGTTGAATGAATGCGAGAGGCCATTAGCTCCACTGAATTTGTGGAGCTCCGATTCGATCGTCTCCATGATCTTGGCCTCTTCCAGATCAGGTGTGGGCACATCCACATGCATTGAGCCTTGCTTTATGGGACCGATGAAGTCTTCATTCAGGGCTTGCTGTTTGATGTAATTATACAGCTCCTGGTGAAAAGGGTGATCATAGGAGTAGCAATCAACTCCATCCGACGAATCATTCGACGAGCCTGATCCTTCTCGCTTGCAAAAGTTTGGGAGTGCCTCATAGTCCATAACCTTTAGTAATTCATCTCTTCCTGAGCCGTACAGGACTTTAATTTTCCTTTTTGTTCTTTCTTGTAGAAGAGGCTTCACAACCTTCCAACATGCTGAAAAAACATATGGAGCATTGACAATGAAATAGGTCTCTGTTTTCTCAGGATAGTTAAGGTCATCGATGGCTGTTATCGTAGATAACATCTTTATTTGGTTCAAGGCAGAAAGCTTCAGCCCCGTCATATCCATAACCTTTAGGCAAGTGTTAATCTGTTTCCCGAACATCTTAGAGGCTTTCGGCAGTACAACACGATCTCGATATTCATTCATCTGTATGTGTGATTGCACATAATAGTGCACCGATGCCTTGTCAAGGGTACTGAGCCCAACACCGAATGCATAGACAGGTTGTCCCTGCTTGGAGTATCCTGTCAATCCAACCAGCAGCGTATCCCGAATAGTTCTGTATAAATCAGAAGGGACTATAGGTTTAGCCAGAACGCTGTCAATCCCATTTTGTATCCTCCAATTTAAGCAATCCATTAACATTTTATGTGCTTTCGGAACATTCCATTCTCTGGCCTTTAGAAAACGCACCAGAGTTCCTCTTGCGTATCCTTGATGGACATGCTGTGAACATTTAGCATAGTACTAGTTAAGCATTAGTCACCCCTAGAATTATTATTTTCAAACAAGCAGCTGATGAAAAACTATATAACTAGTGATGGAATATTTGTAGGGAAAAAAAGGAAATGCAACTCATGCATCCAAAAAAACAAAACGGAAAAAGAAGATAACAAATGTAGACAGAGGTCAAGAAAAAGCATCTAGCAACACAACAGGGAGAGAAAAGCAAATGTTGTTCTTTGGTGGTGACATTGTGACTGCTGTGGGAAAGAAATATATTTTTTTGAAACAAAGATGTTGTTTCTTAGTGGACATATTGGGATTCCAGCGCGCTTGCGCAACCAAACACATCTTCCTGAGATCACTAATGGCATCATACTTATCAGGAAAAGGACAGCTAGAGCATAAGCATATAAAAGAAGTCCAAATCGGCAATTGAAACATCTCCACCAGGAACAGTCCCAGGCCACACAAAGTCCAGGAACACAAGGTCCATCCCTCATCAGCAAGCGTCCAAATTAAACAACAGCAACTTCTTCGGCCATTAATTAGCGGCCACCGAGATCCACATGGTGACATGGTGTCTGAATCACAATTCACACCAACAAGAAGCCTTGCCGTGAAAGATCACACAACAAAGCCATCTCCCTCCCATGTACTAAATAGTTTGGCTTCCAACTGCTAACAATACATACATCATTCTGGTGGTACTTGACCTCACAAAGTCTTGGGATCTAGAAACCATAGCCATTGGAACAATCAACGAATATGGTTGGAAAATTAAACTCTCCTAGCCGGCACAGATGACTGAGTCAGACGAGATGTAATAAAGTAATAATACAGCTCTTGAGCTCCAAATGACGAAGCTAGGAACAAACAGTACATGGCACCGACACCAAGAATTGCCCCAAAATTGGCTGCTTGTACCAAAGCTGCAATTAGGACCGCAAAAGGTACTAAAGTACTACTTAAAACATCTCCCAAAATCTTCTTACAAAAAAAAATATCTGCCTGTGCAAGTCAAGCAAAATTTGCTCAACTTTTTCGCCGCAAATTTGCTCAACTACAGCTGAAGATAGTGGTTTAGCCCTGAGTCCACGGCATGAATACGGTAAAAAAAAGAAGTGCAATTTCACCTAAAAAGATACTAGTCTGAAAAAAAATTGCAACTTGACCATAGAAAAAGTGACAAAAACTGCGACCGAACAGAAATCATATAAATACAAAGTAAACTGTTGGAGCACCAAACTTGAACGCTATAACTAGTCAGACAATCAATTTAAGAGCATGAGCTAGAAATGACCAAAGTAAAACCATATAAAGAAAACAAAAACTAAAGATGTTCCAAATTGATAAAAGAAAGCTTGACAATATTACAGCTGAGCTACGGATCACAATGAACTTTCAAAGATCTATAAAATTTACCCACCAAGCAAGAACCGAGCAAAGAATGGGAGCTGCAACTCCCAAATCCACCAAAAATGCAAAGCAAGAAACAGAAGCAGAGGCAAAAAAAAAAATCAAGCAAAGCTCGGCCAAAACAGCCGCACGCCCAACGCAGAAACATCACCAAATATTACCAACCAACAAGTTAGTTCTAGCAGAGCAAAATACAGAGCAAGGAAGGAAGAAAGAGATCCAGCCATGGCAGCAGAAAGAGCAGATCGGCACCTGGAATGTGGTCTTGAGCGGCTCATCCAGCAGCTCCATCAGCGCGGAGAACTGCTTGATGGCCTCCTCCGAAGCGGCCGCCATTGCTGCCTGCCGCCGGTGACGGCGGCGGGGAGGGAAGAGGGAGGGGGGCGAGCCTTCGCGGTGAGCAGGGCGAGGTCAAACGGGGAGAAAGCTGGAGTCTTTACTCGCCTTTTCCACACACACCCCTTCTCTTCTGCCCTTTTATCTTCTTCCTCCGTCGGTCGGATCGATCTGCTGGGTAGCTGCTGCTGCTGCTGCGTATTGCGTGGTCGTGTGCTCGTGTCGCGCGTATGCGGTCCGTGGAGGTCCGGCCGACGATGGTGAGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0429400.1 | 9 | 4351191 | A | T |
| Osa09LNT0429400.1 | 9 | 4353302 | T | C |
| Osa09LNT0429400.1 | 9 | 4350198 | T | C |
| Osa09LNT0429400.1 | 9 | 4350336 | G | A |
| Osa09LNT0429400.1 | 9 | 4350506 | C | G |
| Osa09LNT0429400.1 | 9 | 4350908 | C | T |
| Osa09LNT0429400.1 | 9 | 4350960 | G | T |
| Osa09LNT0429400.1 | 9 | 4351096 | T | C |
| Osa09LNT0429400.1 | 9 | 4351104 | G | A |
| Osa09LNT0429400.1 | 9 | 4351301 | A | C |
| Osa09LNT0429400.1 | 9 | 4352445 | A | C |
| Osa09LNT0429400.1 | 9 | 4353929 | T | A |
| Osa09LNT0429400.1 | 9 | 4354476 | A | C |
| Osa09LNT0429400.1 | 9 | 4354753 | G | A |
| Osa09LNT0429400.1 | 9 | 4352774 | A | G |
| Osa09LNT0429400.1 | 9 | 4351954 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0429400.1 | osa-miR159c | Translation | 5.0 | 20.588 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR159d | Translation | 5.0 | 20.588 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR159e | Translation | 5.0 | 20.588 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR159f | Translation | 5.0 | 20.588 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 20.573 | 1 | 20 |
| Osa09LNT0429400.1 | osa-miR319a-3p.2-3p | Translation | 5.0 | 12.773 | 1 | 20 |
| Osa09LNT0429400.1 | osa-miR319b | Translation | 4.5 | 20.573 | 1 | 20 |
| Osa09LNT0429400.1 | osa-miR319b | Translation | 5.0 | 12.773 | 1 | 20 |
| Osa09LNT0429400.1 | osa-miR172d-5p | Cleavage | 5.0 | 19.119 | 1 | 20 |
| Osa09LNT0429400.1 | osa-miR1856 | Cleavage | 5.0 | 18.819 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR2871a-3p | Translation | 4.5 | 12.368 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR2871b | Translation | 4.5 | 12.368 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR2872 | Translation | 4.0 | 10.299 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR2929 | Cleavage | 4.0 | 19.753 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR5488 | Translation | 5.0 | 15.187 | 1 | 21 |
| Osa09LNT0429400.1 | osa-miR1857-5p | Cleavage | 3.5 | 8.097 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0429400.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0429400.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0429400.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0429400.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0429400.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)