© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0429900.1
ACGAGCTTATCTAACTTTTATTATTCCACTGTTTATATAATGGTACACTCTATTGTCATTAACTCACGCGATTTCCTCGTTTATATTGTAACAAATTTTATTTTACTTCTATGTACCCTACACATAGCCCATCGGAAGCAAGGTTTACACCCTTTCTTTATCAAATAAAGAAATTGTGTAGTCTTTTGTCATGTTTCCGTGCAACTGCATGGTTCAGATAGTCATTTTTTTTAACATAGTTCATCAGCCCACAGATGTATGGTGCTTTCTTGCTGATGTTTGATCCAGCTATCCTTGGCCTCCTGCTCCAAACTGAATGTTGAGTTCATAGTTACATCTTCAAATATGATATCCCACATATTCTCCGAGAATAAAGACATGTCAGGCACTGCAAACAAATTTTCAGGCTTCATATCGTTCTTAGGCTGATGATCATCCGAATGATTAGTCAGCCTTGTGCTAGCATATTTGTCGTTGATGGAAGAGTATTTTGGGGAATCTGTCTCAACAATGTCTGGACACACCATGTCATTGCCAAACTTGCATGTATGTTTGCCAAAGTAATCAACGTTGTAGAGTTTCACCACACTGTTGCTGCTATTGTCATTCTCTATTTGTTGCACAGTCTTGGTTGCCATACAACCTTGTCCTTTTTGGTTGGTGCATCTATAATAACTCCTGGAGTGCTTGGTTTTAGAAATTGACTTTTGCCCATACTTTCTCCATTCATATCCATCGTAATCTGGAGTTGCTGTAACAACTGAACCGGTGTGCTGAGCATTCTTCCTTCTCTTGTTTTTGGTAACTGTACCATCCTCAATAAAGACCTTCATGTTGTCTAAAGCATTCCTACCATTCCCTTTGTCTATTCCAGGATCCGAGTTCCCGCCGTCACATACCTCAGCCTGAATTTTGGAAATAATTCCATTGGAGCAGCAGAGAATATCATCGAAGGCATGTACAATATGATCTGCTTGCACGTTGTTGAATCGAAGGATTGGTATGATGTGATTCTTCAGATCAATAAGAAGACCGTGCTCTCGTTTCATCTCCTGGAGTGCTTTGTTTTAGAAATTGACTTCTGCCCATACTTTCTCCATTCATATCCATCGTAATCTGGAGTTGCTCTAACAACTGAACAGGTGTGTTGAGCATTCTTCCTGCAAGCACGGAAAGAACCAATTATACATCCGTTATTCACTACTCCATTCATGCCATTTTGATCATCCCCTAAGTTTTTCTACGTCTTCTCAAAATGACCATCATCTAACAAGTGTATTTTCATTTATTTGTGCAAACAGTAAATATGCATCATTAAAGGTGTTGCATGCAACCAATCAAGAGTAATTTTTATTAGTACAATGACATGCAACATTTAAAGTATGAGCAATCCATGGAACACGAAGCGACGAAGCACCTTAACTGAAGAGGATTAATTTAAGAATGATGAATATTGTGCCTTTTACTTAGGAGCTGATTAAACTAGGATGGAGGGATAAATTCCTAACTAGAACAAAATAATTAAACACTTTATTATCTTTCTTTTGTTTTTGTAACTGTACCATCCTCAATAAAGACCTTCATGTTGTCTAATGTCGAAACAGTACTAGAAGAGCGGTTTTTCCGTGCGGTCAAATGTGATTTTCGCGTGCGGGAGGGTGGCCCTCACGCACCCAAGGATCTGCGAAAATCATGATTTTTGCATGCGGGTGGCGCACCCGCAAGCGAAAATCTGATTTTCGCGTGTGGGTGCTTATGTCGGGCGCACGAAAAAACAAAAATCCAAAAATTTTTCAAAAAAATGAATCCGGTGGCACCGCCTCATCGTCCTCGTCGGCTGAGGACCCTGCTCCCACCCTCGTCGTCGTCGATGGCAGCCTCCGCGCAGCCGTCCGCCCTCCCGCCGGTCTCCGTGGCGCCTGCCGCCGGCATCCGTGCTCCCCTCCGGCCGCACCGCTGCCGACGCCCCTCCCCTCCGCCGGATCTGAGGAGGGAAGGAAGGGGAGGAGAGCGGAGCCGGATCCGCGCTCCCGCCAGCTTCCGTGCTCCCCTCTAGCCGTAGCGCCGCCGATGCCCTTCCCCTTCGCCGGATTTGGGGATGGAAGGAAGGAGAGGGGAGGGGAGTGGGATCCCTCAGGGGAGAGGGCGGCCGGTCACCGGATCCGTGCGGGGATGGCCGCCGCCCACCAGATCCCGCGCGCCGTTGCCGCCACTGCCTCCGTCGGGACTCAGGAGGGGAGGAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0429900.1 | 9 | 5189141 | A | G |
| Osa09LNT0429900.1 | 9 | 5189645 | T | C |
| Osa09LNT0429900.1 | 9 | 5189706 | C | T |
| Osa09LNT0429900.1 | 9 | 5190218 | A | G |
| Osa09LNT0429900.1 | 9 | 5190397 | T | C |
| Osa09LNT0429900.1 | 9 | 5190749 | C | T |
| Osa09LNT0429900.1 | 9 | 5191161 | C | A |
| Osa09LNT0429900.1 | 9 | 5191349 | T | C |
| Osa09LNT0429900.1 | 9 | 5191376 | A | G |
| Osa09LNT0429900.1 | 9 | 5191503 | G | A |
| Osa09LNT0429900.1 | 9 | 5192048 | A | G |
| Osa09LNT0429900.1 | 9 | 5192395 | A | G |
| Osa09LNT0429900.1 | 9 | 5192645 | A | G |
| Osa09LNT0429900.1 | 9 | 5192765 | A | G |
| Osa09LNT0429900.1 | 9 | 5193054 | T | C |
| Osa09LNT0429900.1 | 9 | 5193225 | T | C |
| Osa09LNT0429900.1 | 9 | 5193350 | A | G |
| Osa09LNT0429900.1 | 9 | 5193516 | T | C |
| Osa09LNT0429900.1 | 9 | 5187844 | A | T |
| Osa09LNT0429900.1 | 9 | 5189252 | A | C |
| Osa09LNT0429900.1 | 9 | 5189610 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0429900.1 | osa-miR5536 | Cleavage | 4.0 | 15.501 | 1 | 22 |
| Osa09LNT0429900.1 | osa-miR5816 | Translation | 4.5 | 15.994 | 1 | 24 |
| Osa09LNT0429900.1 | osa-miR1435 | Translation | 4.5 | 11.298 | 1 | 20 |
| Osa09LNT0429900.1 | osa-miR812f | Translation | 5.0 | 7.543 | 1 | 24 |
| Osa09LNT0429900.1 | osa-miR2095-3p | Translation | 3.0 | 21.813 | 1 | 20 |
| Osa09LNT0429900.1 | osa-miR2099-5p | Translation | 4.0 | 21.075 | 1 | 22 |
| Osa09LNT0429900.1 | osa-miR2121a | Cleavage | 4.5 | 13.152 | 1 | 24 |
| Osa09LNT0429900.1 | osa-miR2121b | Cleavage | 4.5 | 13.152 | 1 | 24 |
| Osa09LNT0429900.1 | osa-miR5827 | Cleavage | 3.5 | 5.725 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0429900.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0429900.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0429900.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0429900.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0429900.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0429900.1 | 9 | Sub-1(t) | Resistance or Tolerance | Submergency tolerance | C1232 | RZ698 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)