© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0430100.1
AGAGAAGTAGAAGTAACCACCGTCCTTTCTATACACGTCTCCATTTCTTTCCTCTCCTTTTCCTTCCCCTCCAAATGCCAACCCAAACTCCACCCAAGCTGCAGCTAATCAAATCATCCATCAACTACTACTATCTCCCGATTAGAAAAAAAAGAAAGAAATCAGGAAGAAATCGCCCATGGCGAAAGAAAAAAGAATTCTTGTAGAGAAAAAAGGGGGACAAAACCCAGAGATGAGAACTACATGGTGGATTGGCTCATGATAGTGCAAATCATTGGCTGAGATGAGGAAAGGCATGTTCATCGACTCCAAGATTGTTCACACCAAATGTCAGGCATCTGAACAAGACAGTCACCCTTAAGAACGAAACAGCTTCTTGCTCAACTCAAACGGGATAGTTCTGGTGGAGAAGGTTCAACCTTAATTATGCAGTATTGCTTCAGCAATTGTTTTACACGGCATCAGCGCCTCCAAGCATGTGGCCACCATCAACAGCCATAGCGTCTGCATAGTTTGCTTGATGCTGGCTCCCAGCATATGGTGCATTCCTTCGCACACGATTGTGCTCATCTGATTTCAACAAAACAGGAAAAGGCTTGTCACATATACATGGCAGAATGTTCATTTGTAATGTTGATATCTCAGTTATCAAGACATTTTTTGCCCTACTAATGCTTATTGCACATGTACGGGATACCATAATTTGTAACCATTTGGCCATAGATGTAAAATGCGGACTGCAAAAAAAACATTGGTGTTGTGGCCGACGATATTTCCGACGAAACGTTCATTGAGTTACAAGGATCCCACCTCCCAGGAAGAAATAAATACAACAAAATATACAAGAAAAGAAGCAATTGGTGTACAACCATGGCAGTTGAAGCTGCTACACCTATTAGGGACTTGGGGGGCAAACTTCCTAAACTAGAAACAGAAATAATTTTTTTCTGCAACATCAGAACGTCCATATCCTTATGTTCAAGGAACAAATAGATTAGTATTTACCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0430100.1 | 9 | 5835183 | C | T |
| Osa09LNT0430100.1 | 9 | 5837684 | A | T |
| Osa09LNT0430100.1 | 9 | 5836578 | A | C |
| Osa09LNT0430100.1 | 9 | 5836494 | T | C |
| Osa09LNT0430100.1 | 9 | 5838510 | T | G |
| Osa09LNT0430100.1 | 9 | 5838477 | A | G |
| Osa09LNT0430100.1 | 9 | 5834390 | T | A |
| Osa09LNT0430100.1 | 9 | 5834885 | A | C |
| Osa09LNT0430100.1 | 9 | 5835293 | G | T |
| Osa09LNT0430100.1 | 9 | 5835580 | A | G |
| Osa09LNT0430100.1 | 9 | 5837062 | T | A |
| Osa09LNT0430100.1 | 9 | 5837902 | A | G |
| Osa09LNT0430100.1 | 9 | 5838359 | C | G |
| Osa09LNT0430100.1 | 9 | 5834778 | A | G |
| Osa09LNT0430100.1 | 9 | 5836448 | T | C |
| Osa09LNT0430100.1 | 9 | 5838464 | A | G |
| Osa09LNT0430100.1 | 9 | 5836688 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0430100.1 | osa-miR5536 | Cleavage | 5.0 | 16.313 | 1 | 22 |
| Osa09LNT0430100.1 | osa-miR160f-3p | Translation | 4.5 | 23.33 | 1 | 21 |
| Osa09LNT0430100.1 | osa-miR426 | Cleavage | 4.0 | 17.301 | 1 | 21 |
| Osa09LNT0430100.1 | osa-miR2864.1 | Translation | 5.0 | 16.841 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0430100.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0430100.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0430100.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0430100.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0430100.1 | 9 | Sub-1(t) | Resistance or Tolerance | Submergency tolerance | C1232 | RZ698 |
| Osa09LNT0430100.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)